Csa4G596000 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G596000
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 19178743 .. 19179771 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAAGAAAAAAAAAAGAAAAAAAAACAAAACAAAACAAAACACACACTCAAAACTCAAAAACTCCCCCGAAAGGACAAACAGAGAAACTCCCGCATGTTCAAACGGAGGGTTTTGGGAGATTTCAGAGGGTAAAATTCGTCGAGAATTAGGTAAAAAACTTTCAGATTTCTTTCGACGTATGCCTTTTAGATTTTCATTTCTTCTTTGTGTTTTCTTTGATCTGTGATTTCTTCCCTGTTTTTTTTTTTTTTTTTTGGTTTTGATCTGACAGCATTTCAATGCCTACCCTGTTTCAAAAGTAGGGTTTTCCCTCTCTTCTTCTTTCATTTTTCATTTTTGGCTTTCGTGATCATTTGATTGTTTTCTTTTCTGGGTTTCTGTTTTTCGGTTGCTACTTGCTTCTTTGTTAGGAACAAATTGAGCGTAATTGAAGAAAGTTGAGATGCTTCTTCTTTTCTTTTTTCGTTTGTCAGTCCTAAGTAGCTAAAAGGTTCTCAATTTCGCTTTCTTTTTCTTCTTGTTTGTTGTTGAACTAAAGATACGAGGAAATCCTGGTGTAAAGGTGTTGAAGGATAATTTAATTGCAGAAGTTTTTGGTAAGAGAAATTTTCTAGTTGCGTTTTATCTAAAGGTTTGGCCTTGTTTTCTAAGTTGAAAGCTGGAAAGAGGGATTTAGAAGCTCTTCTTAAATGATTAGACAGAGTCAATTCAACCGAAAAACACTGATTTTCACTTGCATGTTGTGGGGAAGATTTTTCACATTATAGTTCATCTACACTCATTGGAGAATTGATATCATTTCTTCAAACTCGGTTTCTTCTATATTAGTTGTCTTGCATTGGTAGGTAAATAAATCAGCTATACTATTGGTGACTAGTCAATAGTACTTTTAAACTACTCTAATGGCTCTGTTCTCTCCCTCGCTCTGTCTTCTTTGCATCATGGTAATTGTTTATTGTGTTCTTCAGACTTCAAGCTATATAATTCGCACATCAACTACTGGAAGGGTATTTTTGGAGAATGA

mRNA sequence

ATGAAAAAGAAAAAAAAAAGAAAAAAAAACAAAACAAAACAAAACACACACTCAAAACTCAAAAACTCCCCCGAAAGGACAAACAGAGAAACTCCCGCATGTTCAAACGGAGGGTTTTGGGAGATTTCAGAGGGTAAAATTCGTCGAGAATTAGACTTCAAGCTATATAATTCGCACATCAACTACTGGAAGGGTATTTTTGGAGAATGA

Coding sequence (CDS)

ATGAAAAAGAAAAAAAAAAGAAAAAAAAACAAAACAAAACAAAACACACACTCAAAACTCAAAAACTCCCCCGAAAGGACAAACAGAGAAACTCCCGCATGTTCAAACGGAGGGTTTTGGGAGATTTCAGAGGGTAAAATTCGTCGAGAATTAGACTTCAAGCTATATAATTCGCACATCAACTACTGGAAGGGTATTTTTGGAGAATGA

Protein sequence

MKKKKKRKKNKTKQNTHSKLKNSPERTNRETPACSNGGFWEISEGKIRRELDFKLYNSHINYWKGIFGE*
Homology
[Close]
BLAST of Csa4G596000 vs. TrEMBL
Match: A0A0A0L2T7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G596000 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 9.3e-34
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MKKKKKRKKNKTKQNTHSKLKNSPERTNRETPACSNGGFWEISEGKIRRELDFKLYNSHI 60
          MKKKKKRKKNKTKQNTHSKLKNSPERTNRETPACSNGGFWEISEGKIRRELDFKLYNSHI
Sbjct: 1  MKKKKKRKKNKTKQNTHSKLKNSPERTNRETPACSNGGFWEISEGKIRRELDFKLYNSHI 60

Query: 61 NYWKGIFGE 70
          NYWKGIFGE
Sbjct: 61 NYWKGIFGE 69

[Close]
BLAST of Csa4G596000 vs. NCBI nr
Match: gi|700199759|gb|KGN54917.1| (hypothetical protein Csa_4G596000 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-33
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MKKKKKRKKNKTKQNTHSKLKNSPERTNRETPACSNGGFWEISEGKIRRELDFKLYNSHI 60
          MKKKKKRKKNKTKQNTHSKLKNSPERTNRETPACSNGGFWEISEGKIRRELDFKLYNSHI
Sbjct: 1  MKKKKKRKKNKTKQNTHSKLKNSPERTNRETPACSNGGFWEISEGKIRRELDFKLYNSHI 60

Query: 61 NYWKGIFGE 70
          NYWKGIFGE
Sbjct: 61 NYWKGIFGE 69

The following BLAST results are available for this feature:
BLAST of Csa4G596000 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2T7_CUCSA9.3e-34100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G596000 PE=4 SV=1[more]
BLAST of Csa4G596000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199759|gb|KGN54917.1|1.3e-33100.00hypothetical protein Csa_4G596000 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G596000.1Csa4G596000.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G596000Watermelon (97103) v2cuwmbB304
Csa4G596000Wax gourdcuwgoB401
Csa4G596000Cucumber (Gy14) v1cgycuB042
Csa4G596000Cucurbita maxima (Rimu)cmacuB467
Csa4G596000Cucurbita moschata (Rifu)cmocuB455
Csa4G596000Melon (DHL92) v3.5.1cumeB333
Csa4G596000Watermelon (97103) v1cuwmB343
Csa4G596000Bottle gourd (USVL1VR-Ls)culsiB265
Csa4G596000Cucumber (Gy14) v2cgybcuB166
Csa4G596000Melon (DHL92) v3.6.1cumedB322