Csa4G572290 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTTCCTTCACACATGTCTCCGTAGATTCTGGAACTTCTGCTTATAATTCAAAGGGGTTATATTTTATGTGGGAGATTTTTGTCTCAACCTTTATCACCTTGGTGTAGGATTTTCATATTTGTTAAACGTCTTAACCATGTGAGAGCTCTGCAAAATAGTTTCAGTTTCAGTTGATTTTGGAACTTGGCTCTGCCCCATAGGGGTTTCTGGTCTCACACTGTGCTTTTTGGCGTTTGAAGGTCGACATGGAGAGTGATAATGGAGATATGAAGACCAGGATGGAAGACTATGAAGTTATTGAGCAGATTGGGAGGGGGGCATTTGGATCGGCTTTTCTTGTGTATCACAAGACTGAGAAGAAGAAGTAAGAAATATTTTTGAACTTCTGTTATTTCAGCAACTGCTTCTAAGTCCTTCAAATGAAAACCCTGATGTTCACACTTCCTTGTAATTATTGTGAGAAATGCTGATGCTTAGCTGTGTATTAAGTTGAGAGATCATGGTTAGTTTTCTGTTCTTCTCAGTTGCTAATGGAACCCTAATCTTCATAACTAAAATGGCCCATTCAAGATTTATACTTTTTTTTTTCTGAGTGTAGAAGTGAAACAATTTTTTGGTCTTGTGGCATCACAAAATTGTTCGGCTTATTTTAGTGCTTCTCTCAATATTTACGTTCTTCCTAAATAGATATGTACTCAAGAAAATGATCATGGTTAGTTTTCTATTGTTCTCTGTTGCTAATGGAACCCCAATCGTCATAACTAAAATGGCCCATTCAAGATTTATACCTTTTTTTCTGAGTGTAGAAATGAAAAAGATTTTTGCTCTTTTGGCATCACACAATTGTTCGGCTTATTTTAGTGCTTCTCTCAATATTACCTTCTTTCTGAATAGATATGTACTCAAGAAAATTCGCTTGGCAAAGCAAACAGAGAAGTTCAAGCGCACTGCCCACCAAGAGGTTAAGTTTATTTAGAACCTATATCAACTATTTAACTGTTTGAAATACTGCTCATTATTCTCAAGATCTGATTTAATTGACTCTGTTCTGTCTTTACAATTTGTCAACTACAAATGAATTGCTAGTTAACAGGGGGTAAATAAATAGCTATTAACTTAGGAAATGTTTAATGTCTGCCTCACGTTCAACGATAATGCTTAATGATACAAAACAGATCACATAGAAATTGGAGAAAATATAAAGAATTTTATGTTGGCAAATGTGGGAAGGGTAAATTATGGAAGATTGAGTGTTTTCTTGATTCTATGATACGACTCCATATGTTCTTTATTATGAAATGAATTGAGCCATTGTGTACTTCTTCAGTACTTTTTACTTCTCTAGAACAGTCTAACCAGGTGACTTGAAAGTTTTGTGGAAAATTAGTGACTTCTTTATTTTTTCCTGAATTTAGTAGATAATGGGTTTTCAAAAGGAATTTGCTTTAAAATAAAATGCATTCAAAGTTTGTAGACATGGCAAACTCTTAAATCCTCAATTCAACCAAAAGCTTAAGCGGGTGGTTGAAGGCAAATTTCATTATATATCACACCACTCCCCCTCACTTGTGGGCTTGAAATATTTGAAACGCCCAACAAGTGAAAATCAATTTTAATTGGGGAGGAAACAACAATTAGGACCTTTTGGACCACCTGCATTGGTACCAGCTCATATTACCAATTCAACCAAAAGCTTAAACTAATGGTTGAAGGCAAAATTAATTATATATAACTAACACAAACTATCTCACTAATCTTGATTTACAACTAAGAAGATACCTTAGTTTGGTACAATGGTTAAAGGGGCAAGTTGAACACCTAGACGCTGAGGTCATTTTTCTAACTATGGTGCTCTGGATGCCATATGTTGTTGGGTTAAGGGGTTCTCCTAAATGATAAGTCAAGTGTGCTTAGGCGGGTTCAGACGCCCAAAAAAATGGACATTTTGTTTTCATCCTCAGTGTGAACTTGGCATGTTTTCTCTTCAAAATTTAACTTAACGTAGTTGATGAGTAAATATCCTTGATATTCACAGTATGTTTCGTTACTGATGTGACCTTGTCAATTACAGATGAATTTGATTGCAAAACTAAATAACCCATATATTGTGGACTACAAAGATTCATGGGTGGATAAGGTAAATTTTGTTCTTTCCCCTCCTATTCAGATCTGGATTGAATCTGTTTCTTTTACAATAAGAACTCTTGCTTTTAGAATTTGGAAGTAGAGGTTGGTTTTTGTTTTCTCAGTTCTTATGTGGATTTTTCTTTTTTGAGCCTACCTTGTGTTGTGTATAATCTTGATCCTTCATGCTGAAAGATTGTAGTTTAAGATGTTTTAGATTGTTGGGTCAATATTGCTTTGGATAAGACACAATTTCATTGATGAATGGAATATTAAATGAGTTCTGTTAAAAAGAGATTATTTAATACAAAAGTTGAATCAATACTGTTAAAAAGGATTATTTAATACAAAAGGGGTGATTGTGACTACTTTCTTTCTTTGGAAGGAAATGAATTGTTTATTTCTGAGTGACTCAAAGAGGAAAGTGGACTCTCAATTTGAGAGGGTGTTCGCAATCGACTATAAATATATGGTCTATAGATCATAGCTAAAGCTATGGTGATTCTTTGTATTCTCATTTTCACTCACGTTTCATATTTTGGGCATTCTGTTTTGTAGGGTGATTGTATATGCATTGTAACTGGCTACTGTGAAGGAGGAGACATGTAAGTGTCTAAGTGATAGGTATTTAATACCATTTAGAGTTTTCTTTATTTACAACCTTTACAGAGTAGTTTATTTTTTGGTTCAGGTCATGATTAAATTTTAGATTGAATGAATAATCTGCAACCTTTTTAACAATGTTTATTGATTCCCCAGCTCTAAAGAAACAGAACTAATTGAAGAATACATGTTGTCTTGAATTAATAAGAGAACAAACGTTAGGTGGTCCACTGCTAGTCATGCGTTCAATTTATTTTGCTTTCTCAGGATCCTTCATTTCTAATTTCTAAATGTCCTCCACTACCATCCTCTTTCTTCCTTCTCTGATGTGTATATCTGACCAGGTTAAAAATCTGACTGAAAACCCCTTCCATTGATATAAATAAAAAAGGATTTGGCTAAAAAATTCTCCCTCACCTTCTTTCCTTCCCTCATTTTAGTCTCTCCCTTCGAGATTTCATCTTCTATTAATGTCATTGACAGCATGAATCTAAGTGATGAAGATTAGGTATCCGAAGAAGAGATTGGTGAATGATAATAAAAGATCCTTCCAGGTGGCAAAGATTAAAAAAACAAAGCATGAAATTCTTTGGTGACAAAAAGTCAACATTAGTCTTATTTCGCGACATATTATTGTAGAAATATATGAGTCGATATGAGTGTTTTCTGCTGTAGAGAAAGAGAGAAAGGGATGAAAAGAAAAATCAAAACTAATGGTACGCCTCGTTTTCTTTTGTTGAACAGGTCTGAACTGATCAAAAAGGCCAGAGGAACATATTTTCCGGAGGAAGTAAGTCGATTTCAGTGTTAATTATTCTTTTCCTACCAAACCTATGTCTGATTGCCATTTCGTTCTCTCAGAAACTTTGCAAGTGGTTGGCACAGTTGTTGCTAGCTGTGGACTATCTGCACTCCAATCGAGTACTACATAGAGATCTTAAGGTATTTAATTAGTATTAAGTATTAACCTACACAATATTGCAATTAAAAACTCATTAATGATACTGATCTGTTTTTCATTTTCAAATTTTCTTCAATTACAGTGTTCCAACATTTTCCTTACAAAGGGCAATGATATCCGGCTTGGTATGATGTCTTCCAATTTAACTTGGATGGGATTTCTTTTCCTAGTCATTTCTTCTAGAAAAGTGCTAATATCTAGGATGTCTGTACAGGGGACTTCGGACTTGCAAAACTGCTGAATACAGAAGACCTTGCTTCATCGGTAAGATGCAATCATTGTCTGTGGTAA ATGGAGAGTGATAATGGAGATATGAAGACCAGGATGGAAGACTATGAAGTTATTGAGCAGATTGGGAGGGGGGCATTTGGATCGGCTTTTCTTGTGTATCACAAGACTGAGAAGAAGAAATATGTACTCAAGAAAATTCGCTTGGCAAAGCAAACAGAGAAGTTCAAGCGCACTGCCCACCAAGAGATGAATTTGATTGCAAAACTAAATAACCCATATATTGTGGACTACAAAGATTCATGGGTGGATAAGGGTGATTGTATATGCATTGTAACTGGCTACTGTGAAGGAGGAGACATGTCTGAACTGATCAAAAAGGCCAGAGGAACATATTTTCCGGAGGAAAAACTTTGCAAGTGGTTGGCACAGTTGTTGCTAGCTGTGGACTATCTGCACTCCAATCGAGTACTACATAGAGATCTTAAGTGTTCCAACATTTTCCTTACAAAGGGCAATGATATCCGGCTTGGGGACTTCGGACTTGCAAAACTGCTGAATACAGAAGACCTTGCTTCATCGGTAAGATGCAATCATTGTCTGTGGTAA ATGGAGAGTGATAATGGAGATATGAAGACCAGGATGGAAGACTATGAAGTTATTGAGCAGATTGGGAGGGGGGCATTTGGATCGGCTTTTCTTGTGTATCACAAGACTGAGAAGAAGAAATATGTACTCAAGAAAATTCGCTTGGCAAAGCAAACAGAGAAGTTCAAGCGCACTGCCCACCAAGAGATGAATTTGATTGCAAAACTAAATAACCCATATATTGTGGACTACAAAGATTCATGGGTGGATAAGGGTGATTGTATATGCATTGTAACTGGCTACTGTGAAGGAGGAGACATGTCTGAACTGATCAAAAAGGCCAGAGGAACATATTTTCCGGAGGAAAAACTTTGCAAGTGGTTGGCACAGTTGTTGCTAGCTGTGGACTATCTGCACTCCAATCGAGTACTACATAGAGATCTTAAGTGTTCCAACATTTTCCTTACAAAGGGCAATGATATCCGGCTTGGGGACTTCGGACTTGCAAAACTGCTGAATACAGAAGACCTTGCTTCATCGGTAAGATGCAATCATTGTCTGTGGTAA MESDNGDMKTRMEDYEVIEQIGRGAFGSAFLVYHKTEKKKYVLKKIRLAKQTEKFKRTAHQEMNLIAKLNNPYIVDYKDSWVDKGDCICIVTGYCEGGDMSELIKKARGTYFPEEKLCKWLAQLLLAVDYLHSNRVLHRDLKCSNIFLTKGNDIRLGDFGLAKLLNTEDLASSVRCNHCLW*
BLAST of Csa4G572290 vs. Swiss-Prot
Match: NEK5_ORYSJ (Serine/threonine-protein kinase Nek5 OS=Oryza sativa subsp. japonica GN=NEK5 PE=3 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 3.5e-70 Identity = 127/167 (76.05%), Postives = 145/167 (86.83%), Query Frame = 1
BLAST of Csa4G572290 vs. Swiss-Prot
Match: NEK5_ARATH (Serine/threonine-protein kinase Nek5 OS=Arabidopsis thaliana GN=NEK5 PE=1 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 7.9e-70 Identity = 121/167 (72.46%), Postives = 147/167 (88.02%), Query Frame = 1
BLAST of Csa4G572290 vs. Swiss-Prot
Match: NEK6_ARATH (Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana GN=NEK6 PE=3 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 6.7e-69 Identity = 122/163 (74.85%), Postives = 146/163 (89.57%), Query Frame = 1
BLAST of Csa4G572290 vs. Swiss-Prot
Match: NEK4_ORYSJ (Serine/threonine-protein kinase Nek4 OS=Oryza sativa subsp. japonica GN=NEK4 PE=2 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 1.1e-68 Identity = 122/167 (73.05%), Postives = 144/167 (86.23%), Query Frame = 1
BLAST of Csa4G572290 vs. Swiss-Prot
Match: NEK2_ORYSJ (Serine/threonine-protein kinase Nek2 OS=Oryza sativa subsp. japonica GN=NEK2 PE=2 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 6.2e-67 Identity = 117/163 (71.78%), Postives = 140/163 (85.89%), Query Frame = 1
BLAST of Csa4G572290 vs. TrEMBL
Match: A0A0A0L1F2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G572290 PE=3 SV=1) HSP 1 Score: 377.5 bits (968), Expect = 9.3e-102 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1
BLAST of Csa4G572290 vs. TrEMBL
Match: B9II46_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s05240g PE=3 SV=2) HSP 1 Score: 329.7 bits (844), Expect = 2.2e-87 Identity = 157/174 (90.23%), Postives = 169/174 (97.13%), Query Frame = 1
BLAST of Csa4G572290 vs. TrEMBL
Match: M5VWL0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002660mg PE=3 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 5.0e-87 Identity = 154/174 (88.51%), Postives = 169/174 (97.13%), Query Frame = 1
BLAST of Csa4G572290 vs. TrEMBL
Match: U5GBL3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s05500g PE=3 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 1.4e-86 Identity = 157/174 (90.23%), Postives = 168/174 (96.55%), Query Frame = 1
BLAST of Csa4G572290 vs. TrEMBL
Match: A0A061EX49_THECC (NIMA-related kinase 7 isoform 1 OS=Theobroma cacao GN=TCM_024816 PE=3 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 7.1e-86 Identity = 156/174 (89.66%), Postives = 167/174 (95.98%), Query Frame = 1
BLAST of Csa4G572290 vs. TAIR10
Match: AT3G44200.1 (AT3G44200.1 NIMA (never in mitosis, gene A)-related 6) HSP 1 Score: 264.6 bits (675), Expect = 4.4e-71 Identity = 121/167 (72.46%), Postives = 147/167 (88.02%), Query Frame = 1
BLAST of Csa4G572290 vs. TAIR10
Match: AT3G20860.1 (AT3G20860.1 NIMA-related kinase 5) HSP 1 Score: 263.1 bits (671), Expect = 1.3e-70 Identity = 123/174 (70.69%), Postives = 151/174 (86.78%), Query Frame = 1
BLAST of Csa4G572290 vs. TAIR10
Match: AT3G04810.1 (AT3G04810.1 NIMA-related kinase 2) HSP 1 Score: 250.8 bits (639), Expect = 6.6e-67 Identity = 115/163 (70.55%), Postives = 141/163 (86.50%), Query Frame = 1
BLAST of Csa4G572290 vs. TAIR10
Match: AT3G63280.1 (AT3G63280.1 NIMA-related kinase 4) HSP 1 Score: 249.6 bits (636), Expect = 1.5e-66 Identity = 113/163 (69.33%), Postives = 141/163 (86.50%), Query Frame = 1
BLAST of Csa4G572290 vs. TAIR10
Match: AT5G28290.1 (AT5G28290.1 NIMA-related kinase 3) HSP 1 Score: 248.4 bits (633), Expect = 3.3e-66 Identity = 116/163 (71.17%), Postives = 139/163 (85.28%), Query Frame = 1
BLAST of Csa4G572290 vs. NCBI nr
Match: gi|700199726|gb|KGN54884.1| (hypothetical protein Csa_4G572290 [Cucumis sativus]) HSP 1 Score: 377.5 bits (968), Expect = 1.3e-101 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1
BLAST of Csa4G572290 vs. NCBI nr
Match: gi|778695164|ref|XP_011653938.1| (PREDICTED: serine/threonine-protein kinase Nek6 [Cucumis sativus]) HSP 1 Score: 357.5 bits (916), Expect = 1.4e-95 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1
BLAST of Csa4G572290 vs. NCBI nr
Match: gi|659083266|ref|XP_008442256.1| (PREDICTED: serine/threonine-protein kinase Nek6 isoform X2 [Cucumis melo]) HSP 1 Score: 357.5 bits (916), Expect = 1.4e-95 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1
BLAST of Csa4G572290 vs. NCBI nr
Match: gi|659083264|ref|XP_008442255.1| (PREDICTED: serine/threonine-protein kinase Nek6 isoform X1 [Cucumis melo]) HSP 1 Score: 357.5 bits (916), Expect = 1.4e-95 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1
BLAST of Csa4G572290 vs. NCBI nr
Match: gi|743869460|ref|XP_011033286.1| (PREDICTED: serine/threonine-protein kinase Nek6-like isoform X1 [Populus euphratica]) HSP 1 Score: 330.1 bits (845), Expect = 2.4e-87 Identity = 158/174 (90.80%), Postives = 169/174 (97.13%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|