Csa4G556180 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGGAAAAAAAAGATGCCCGAGAAGAAGAAAATGAAGGTAAAGAAAGGATGGTTAGCTGTGGAAGTAGGGTTGCAAGAGGAAGATGAAAGACTAGAAAGATTTGTAGTTCCAATATCTTATTTATATCATCCTCTATTCAAGAATCTTTTGGACAAAGCTCAAGAAATTTATGGCTACCATGCCAATGGTCCTCTTCGGCTTCCATGCTCAGTCGACGACTTTCTCCAACTCCGATGGCAGATCGAGAAAGAATCTGACCAACATATTGACAAACAAAATCATCATCGTCATCGTTATCGCCACCACCATCACCACTATCATCTTCCACTTGCTTTGTCTTTCCAGTCTTGTTGAGGAGAACTTTTGTTTAGATGGATGGGTTTAGGGTTAGAAAGATGTGAACCCTAATTCAAAAAACATGTGTGTGTATGTCTTAGCTTTCTTCTTGCTGTATATTTTTTAAAATTGGCAATGAAGATGGATTTGTGTTTTTAC ATGCCCGAGAAGAAGAAAATGAAGGTAAAGAAAGGATGGTTAGCTGTGGAAGTAGGGTTGCAAGAGGAAGATGAAAGACTAGAAAGATTTGTAGTTCCAATATCTTATTTATATCATCCTCTATTCAAGAATCTTTTGGACAAAGCTCAAGAAATTTATGGCTACCATGCCAATGGTCCTCTTCGGCTTCCATGCTCAGTCGACGACTTTCTCCAACTCCGATGGCAGATCGAGAAAGAATCTGACCAACATATTGACAAACAAAATCATCATCGTCATCGTTATCGCCACCACCATCACCACTATCATCTTCCACTTGCTTTGTCTTTCCAGTCTTGTTGA ATGCCCGAGAAGAAGAAAATGAAGGTAAAGAAAGGATGGTTAGCTGTGGAAGTAGGGTTGCAAGAGGAAGATGAAAGACTAGAAAGATTTGTAGTTCCAATATCTTATTTATATCATCCTCTATTCAAGAATCTTTTGGACAAAGCTCAAGAAATTTATGGCTACCATGCCAATGGTCCTCTTCGGCTTCCATGCTCAGTCGACGACTTTCTCCAACTCCGATGGCAGATCGAGAAAGAATCTGACCAACATATTGACAAACAAAATCATCATCGTCATCGTTATCGCCACCACCATCACCACTATCATCTTCCACTTGCTTTGTCTTTCCAGTCTTGTTGA MPEKKKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWQIEKESDQHIDKQNHHRHRYRHHHHHYHLPLALSFQSC*
BLAST of Csa4G556180 vs. Swiss-Prot
Match: SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 4.5e-15 Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 1
BLAST of Csa4G556180 vs. Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 4.4e-10 Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 1
BLAST of Csa4G556180 vs. Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 6.4e-09 Identity = 30/68 (44.12%), Postives = 46/68 (67.65%), Query Frame = 1
BLAST of Csa4G556180 vs. Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08 Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 1
BLAST of Csa4G556180 vs. Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.8e-08 Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 1
BLAST of Csa4G556180 vs. TrEMBL
Match: A0A0A0L2M8_CUCSA (SAUR family protein OS=Cucumis sativus GN=Csa_4G556180 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 1.2e-62 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1
BLAST of Csa4G556180 vs. TrEMBL
Match: A0A0D2Q1A1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G007200 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 5.9e-38 Identity = 75/111 (67.57%), Postives = 86/111 (77.48%), Query Frame = 1
BLAST of Csa4G556180 vs. TrEMBL
Match: A0A061DK28_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_001616 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 5.9e-38 Identity = 78/113 (69.03%), Postives = 87/113 (76.99%), Query Frame = 1
BLAST of Csa4G556180 vs. TrEMBL
Match: A0A0D2V190_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G037000 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 5.9e-38 Identity = 78/113 (69.03%), Postives = 86/113 (76.11%), Query Frame = 1
BLAST of Csa4G556180 vs. TrEMBL
Match: A5B062_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g02740 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 3.3e-36 Identity = 73/107 (68.22%), Postives = 84/107 (78.50%), Query Frame = 1
BLAST of Csa4G556180 vs. TAIR10
Match: AT5G53590.1 (AT5G53590.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 84.7 bits (208), Expect = 3.9e-17 Identity = 36/93 (38.71%), Postives = 61/93 (65.59%), Query Frame = 1
BLAST of Csa4G556180 vs. TAIR10
Match: AT2G46690.1 (AT2G46690.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 82.0 bits (201), Expect = 2.6e-16 Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 1
BLAST of Csa4G556180 vs. TAIR10
Match: AT4G00880.1 (AT4G00880.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 78.6 bits (192), Expect = 2.8e-15 Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 1
BLAST of Csa4G556180 vs. TAIR10
Match: AT3G61900.1 (AT3G61900.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 65.9 bits (159), Expect = 1.9e-11 Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 1
BLAST of Csa4G556180 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 63.5 bits (153), Expect = 9.4e-11 Identity = 35/72 (48.61%), Postives = 47/72 (65.28%), Query Frame = 1
BLAST of Csa4G556180 vs. NCBI nr
Match: gi|700199704|gb|KGN54862.1| (SAUR family protein [Cucumis sativus]) HSP 1 Score: 246.9 bits (629), Expect = 1.7e-62 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1
BLAST of Csa4G556180 vs. NCBI nr
Match: gi|659083176|ref|XP_008442221.1| (PREDICTED: auxin-induced protein 6B-like [Cucumis melo]) HSP 1 Score: 232.6 bits (592), Expect = 3.3e-58 Identity = 107/113 (94.69%), Postives = 110/113 (97.35%), Query Frame = 1
BLAST of Csa4G556180 vs. NCBI nr
Match: gi|225438339|ref|XP_002272614.1| (PREDICTED: auxin-induced protein 6B-like [Vitis vinifera]) HSP 1 Score: 166.8 bits (421), Expect = 2.2e-38 Identity = 77/113 (68.14%), Postives = 89/113 (78.76%), Query Frame = 1
BLAST of Csa4G556180 vs. NCBI nr
Match: gi|763766123|gb|KJB33338.1| (hypothetical protein B456_006G007200 [Gossypium raimondii]) HSP 1 Score: 164.9 bits (416), Expect = 8.5e-38 Identity = 75/111 (67.57%), Postives = 86/111 (77.48%), Query Frame = 1
BLAST of Csa4G556180 vs. NCBI nr
Match: gi|590709464|ref|XP_007048560.1| (SAUR-like auxin-responsive protein family [Theobroma cacao]) HSP 1 Score: 164.9 bits (416), Expect = 8.5e-38 Identity = 78/113 (69.03%), Postives = 87/113 (76.99%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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