Csa4G431910 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G431910
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 16280581 .. 16280838 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATGTTGTTGTTGTTGTTATACATAGCTCTCGTGATGCCTGCAAAAACCCTCAAAACTATCCAACTTCTTCCTTGCAAAACCCTAGCCCGTCGCTCACCATCTCCATCCGACGTCAAATTCCATCTCTCGCCACCCAGATCTATTCGTCGTCGTGAAGCATCGAGTGTGAGAACTCCGTTGTTCGTTGCGATTTCTCCATTGCGCCGGATCACTGTCGTCTCAGTTCAGCCATCCTCCATCCGCCAGCTGTAG

mRNA sequence

ATGATGATGTTGTTGTTGTTGTTATACATAGCTCTCGTGATGCCTGCAAAAACCCTCAAAACTATCCAACTTCTTCCTTGCAAAACCCTAGCCCGTCGCTCACCATCTCCATCCGACGTCAAATTCCATCTCTCGCCACCCAGATCTATTCGTCGTCGTGAAGCATCGAGTGTGAGAACTCCGTTGTTCGTTGCGATTTCTCCATTGCGCCGGATCACTGTCGTCTCAGTTCAGCCATCCTCCATCCGCCAGCTGTAG

Coding sequence (CDS)

ATGATGATGTTGTTGTTGTTGTTATACATAGCTCTCGTGATGCCTGCAAAAACCCTCAAAACTATCCAACTTCTTCCTTGCAAAACCCTAGCCCGTCGCTCACCATCTCCATCCGACGTCAAATTCCATCTCTCGCCACCCAGATCTATTCGTCGTCGTGAAGCATCGAGTGTGAGAACTCCGTTGTTCGTTGCGATTTCTCCATTGCGCCGGATCACTGTCGTCTCAGTTCAGCCATCCTCCATCCGCCAGCTGTAG

Protein sequence

MMMLLLLLYIALVMPAKTLKTIQLLPCKTLARRSPSPSDVKFHLSPPRSIRRREASSVRTPLFVAISPLRRITVVSVQPSSIRQL*
Homology
[Close]
BLAST of Csa4G431910 vs. TrEMBL
Match: A0A0A0L3J2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G431910 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.3e-37
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1 

Query: 1  MMMLLLLLYIALVMPAKTLKTIQLLPCKTLARRSPSPSDVKFHLSPPRSIRRREASSVRT 60
          MMMLLLLLYIALVMPAKTLKTIQLLPCKTLARRSPSPSDVKFHLSPPRSIRRREASSVRT
Sbjct: 1  MMMLLLLLYIALVMPAKTLKTIQLLPCKTLARRSPSPSDVKFHLSPPRSIRRREASSVRT 60

Query: 61 PLFVAISPLRRITVVSVQPSSIRQL 86
          PLFVAISPLRRITVVSVQPSSIRQL
Sbjct: 61 PLFVAISPLRRITVVSVQPSSIRQL 85

[Close]
BLAST of Csa4G431910 vs. NCBI nr
Match: gi|700199553|gb|KGN54711.1| (hypothetical protein Csa_4G431910 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 1.9e-37
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1 

Query: 1  MMMLLLLLYIALVMPAKTLKTIQLLPCKTLARRSPSPSDVKFHLSPPRSIRRREASSVRT 60
          MMMLLLLLYIALVMPAKTLKTIQLLPCKTLARRSPSPSDVKFHLSPPRSIRRREASSVRT
Sbjct: 1  MMMLLLLLYIALVMPAKTLKTIQLLPCKTLARRSPSPSDVKFHLSPPRSIRRREASSVRT 60

Query: 61 PLFVAISPLRRITVVSVQPSSIRQL 86
          PLFVAISPLRRITVVSVQPSSIRQL
Sbjct: 61 PLFVAISPLRRITVVSVQPSSIRQL 85

The following BLAST results are available for this feature:
BLAST of Csa4G431910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3J2_CUCSA1.3e-37100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G431910 PE=4 SV=1[more]
BLAST of Csa4G431910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199553|gb|KGN54711.1|1.9e-37100.00hypothetical protein Csa_4G431910 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G431910.1Csa4G431910.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G431910Watermelon (97103) v2cuwmbB300
Csa4G431910Wax gourdcuwgoB408
Csa4G431910Cucumber (Gy14) v1cgycuB062
Csa4G431910Cucurbita maxima (Rimu)cmacuB669
Csa4G431910Cucurbita maxima (Rimu)cmacuB867
Csa4G431910Cucurbita moschata (Rifu)cmocuB653
Csa4G431910Cucurbita moschata (Rifu)cmocuB855
Csa4G431910Melon (DHL92) v3.5.1cumeB272
Csa4G431910Cucurbita pepo (Zucchini)cpecuB081
Csa4G431910Cucurbita pepo (Zucchini)cpecuB487
Csa4G431910Bottle gourd (USVL1VR-Ls)culsiB249
Csa4G431910Cucumber (Gy14) v2cgybcuB167
Csa4G431910Melon (DHL92) v3.6.1cumedB320
Csa4G431910Silver-seed gourdcarcuB0609