Csa4G372600 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G372600
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 14971069 .. 14971296 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCGCGACGAAGAAGGAAGAAAGAAAGAGGAGAATGAGGTTCGTGAGACAGATGACTGGAAAAGTGGGAAGAAGAAGGAAAAAGTGAGATAGTTTAAGAGAATGGGGTTCCAATTTCGACATGCATAGCCATTGAAGAAGAAGGGAAAAGTGAGGATTGTGTTGGGTGGGATGAATTCGGAACGTGAATGTGACGTATTGCGAATGCAAAGGGAAAGGGGTTGA

mRNA sequence

ATGCAGCGCGACGAAGAAGGAAGAAAGAAAGAGGAGAATGAGGTTCGTGAGACAGATGACTGGAAAAGTGGGAAGAAGAAGGAAAAACCATTGAAGAAGAAGGGAAAAGTGAGGATTGTGTTGGGTGGGATGAATTCGGAACGTGAATGTGACGTATTGCGAATGCAAAGGGAAAGGGGTTGA

Coding sequence (CDS)

ATGCAGCGCGACGAAGAAGGAAGAAAGAAAGAGGAGAATGAGGTTCGTGAGACAGATGACTGGAAAAGTGGGAAGAAGAAGGAAAAACCATTGAAGAAGAAGGGAAAAGTGAGGATTGTGTTGGGTGGGATGAATTCGGAACGTGAATGTGACGTATTGCGAATGCAAAGGGAAAGGGGTTGA

Protein sequence

MQRDEEGRKKEENEVRETDDWKSGKKKEKPLKKKGKVRIVLGGMNSERECDVLRMQRERG*
Homology
[Close]
BLAST of Csa4G372600 vs. TrEMBL
Match: A0A0A0L0M0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G372600 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 2.1e-26
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1 

Query: 1  MQRDEEGRKKEENEVRETDDWKSGKKKEKPLKKKGKVRIVLGGMNSERECDVLRMQRERG 60
          MQRDEEGRKKEENEVRETDDWKSGKKKEKPLKKKGKVRIVLGGMNSERECDVLRMQRERG
Sbjct: 1  MQRDEEGRKKEENEVRETDDWKSGKKKEKPLKKKGKVRIVLGGMNSERECDVLRMQRERG 60

[Close]
BLAST of Csa4G372600 vs. TrEMBL
Match: A0A0A0KZC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G539590 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.2e-07
Identity = 36/59 (61.02%), Postives = 41/59 (69.49%), Query Frame = 1 

Query: 1  MQRDEEGRKKEENEVRETDDWKSGKKKEKPLKKKGKVRIVLGGMNSERECD-VLRMQRE 59
          MQ +EEGRKKEEN V E DDWKSG       KKKGKV IVLGG + +RE   V+R +RE
Sbjct: 1  MQSNEEGRKKEENGVCEIDDWKSG-------KKKGKVSIVLGGADLKRESPLVMRSERE 52

[Close]
BLAST of Csa4G372600 vs. NCBI nr
Match: gi|700199431|gb|KGN54589.1| (hypothetical protein Csa_4G372600 [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 3.1e-26
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1 

Query: 1  MQRDEEGRKKEENEVRETDDWKSGKKKEKPLKKKGKVRIVLGGMNSERECDVLRMQRERG 60
          MQRDEEGRKKEENEVRETDDWKSGKKKEKPLKKKGKVRIVLGGMNSERECDVLRMQRERG
Sbjct: 1  MQRDEEGRKKEENEVRETDDWKSGKKKEKPLKKKGKVRIVLGGMNSERECDVLRMQRERG 60

[Close]
BLAST of Csa4G372600 vs. NCBI nr
Match: gi|700199685|gb|KGN54843.1| (hypothetical protein Csa_4G539590 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 3.2e-07
Identity = 36/59 (61.02%), Postives = 41/59 (69.49%), Query Frame = 1 

Query: 1  MQRDEEGRKKEENEVRETDDWKSGKKKEKPLKKKGKVRIVLGGMNSERECD-VLRMQRE 59
          MQ +EEGRKKEEN V E DDWKSG       KKKGKV IVLGG + +RE   V+R +RE
Sbjct: 1  MQSNEEGRKKEENGVCEIDDWKSG-------KKKGKVSIVLGGADLKRESPLVMRSERE 52

The following BLAST results are available for this feature:
BLAST of Csa4G372600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0M0_CUCSA2.1e-26100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G372600 PE=4 SV=1[more]
A0A0A0KZC0_CUCSA2.2e-0761.02Uncharacterized protein OS=Cucumis sativus GN=Csa_4G539590 PE=4 SV=1[more]
BLAST of Csa4G372600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199431|gb|KGN54589.1|3.1e-26100.00hypothetical protein Csa_4G372600 [Cucumis sativus][more]
gi|700199685|gb|KGN54843.1|3.2e-0761.02hypothetical protein Csa_4G539590 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G372600.1Csa4G372600.1mRNA