Csa4G338980 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G338980
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein; contains IPR011112 (Rho termination factor, N-terminal)
Location	Chr4 : 14029919 .. 14036407 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAAAGAAAAAGAAAAAACTTCCTTGGCGCCTTCTCTCTTTCCCTCTCTCAAATTCCACGATTCAGAAACCCTAGAGGCCTCTCTCTGCTCCACATTCTCATTTCTCTCTATGTGGATTCTACTGGTGAAGCAGCAGCACCTCCTTGCGTTGTCCTCTCACTCGCTTCTCCTCTGTTGCTGTTGCAGTTACAGTACCAGTACCCCTGGCAGTACTAACCTTTTCTCCTCTATGTTTGTTTTTTTCTTGCTTCGTTTCTTGGAAACATGCTGCATTTCCTCTTTTTATGCTTTTTTTTATCTTCTTCCTCCTGTTTTCATGTTCCTTCTCTATCTTTGTAGTGTATATATCGTTCTTCTTGGGAATCGTTGCATTATGAGCTTTGATTTCTAGTTTTTTTACTGCATTTCTCAGAGGTTGTTTGCATTGATTGGAATTTGCGAGCTGGTTGCTTTTTTAATTTATTTTTACTGTTTTCTTTTCCTTTCTCATTGTTTCGTAGCTTGAGCTTTCATTTCGAGTGCTTTTTTTTTTTTTTTTTTTTGTTAATTTTTCCTTTCATTTGCTATCTCGCTCTGTTAACTGTCGCTAGCTTTGGTTTGTGTGCTTGGAAATATTTGGAGGTTCGGTTCGGTTCTTCGTTTTTGAATTTCATTTAAGAGATAGTTTGCGTTCTTCGGAATTTGGGAGCTGGATGGTTGGTTTTTTACTGTTTTATTTACATTTCGTTTTATTTCTCTCTCTCTCTTGAGCTTTGCATTTCGAGATTTTTATTTTTTATTTTTACTTTTCTTTTGATGTTTGACTCCGTTAATTGTCACTGGTTTATGTAATCTTATATATATATTTTTTATTGTTCTTGTTCTTGGAAATCCTTCTTTTCTGAGCTTCGAATTTTAGTTTTTGGACTACGTTGCTGAGAATTAGTCTGCGTTCTTCGGAAACTGCGAACTGGTTGCCTTTTTACTTTTCTCTTTTCGTTTTGCATTGTTTCTTACTTTCTTCAGCTTTGTATTCCGCATTTTATCATTTATTAATTTTCTTTTGCTGCTTGGCTTCATTAATTATCGCTAGCTTTTATTTGTATTTTTTATCGTTCTTGGAAATCGTCGTCTTCTTAGCTTTGGTTGTTAATTTTTCGACCGTATTTCTGAGAAATGCTTCGCGTTTTGAGAATATGCAAGCTAGTTGGTTTTACTCTTCTCGTTTCGTTTCACCGTGTTTTCTACTCTCTTGAGCTTTGATGTCGAGATTTCTTTTTGGTTACTTTACTTTTCTGTTTGGCTTTTTTTTTTTTTTTTTTTTAATGTCAGTAACTTTGAAGCTTTTTTTCTTTGCTATTTACAGTTTGATCTGCTTCTTGGTTTTTTTTTTTTTTATCGACTGTAGCATACCATTTTGCGACGTTTGTGTTAAACATTGATTGAAGAAGGCTAAAATTCATAAAGGGAGTTATTCTTCATTAATCATCAATAAACTTCACTTAAGTTAAATACAATGATGAGGGCCATATTTATAGCCTTTGGGCCTGATATGTTTTTCAATTTGTAAAAAAATCGAGTTATAATCTCTCTGAAAGTTCTGCGAATATTATCAATCTAGTACTTTGATTTGGTACTCTATCTAGATTTTCTTTTTTTGGGAACTTGATGATAAGGAATTGTTCTTCTCCCAAAATTTGATAAAGAATTGTGAAACATTTTTTAATTATTAGTTTAATTGTTTTGAATATTCAATTTGGTAGTGAGTCCACCATGCTTTCAGGATGTTCATCCTAGGGATCTTGTGTACTCAATGTTGTAGTTTATCATTTTTTATTCAGATTGTTTAGCAGTGAAGTGAAAGCACATCATGTTTCTGATAAATTTTGAAATATAGATGTAATGAGCTGATGGTATTGACTTATCTGGTTACTGGGATGATATCATCAATAGACTTTTGTTTATTTATCTCTTGATTGGTAGAGGTGTTCTATTGCTGTTCTTCTCTTTTGCACATTGATGAATTAATATGGTGCTGGACATTTGTTTTTGCAGGATAAATTTTCAGAGACTTCCATGGACGAGGATCTGTGGGATTGGCCATATGATCAAGGTTCTACTGATTTCCTTACCACTTCCCTCTATTTATCTGAATAATCAAGCTTCTAGCTAATTTGTTTATAAAGGATTGTTCCAGGTTTCTCCTTTTTCGATGCCAATGAAAGCAGTTACAATCTGGAATCTGGATGGCAGGCTGATTTTTACTTTGGTAATGGGAAAGGTAAACTTGATTTAACTTTTGTTCTTTGAAAAAAACTATGTGAATTCTGTTATCCTAGACCCACTTTTTTTCTTTGTTTTATTCTGACAATTGGGCTACTTATTTTTATTATAATTTTATGATCGTAGATGTTATAGAAGAAAATGCTATGAATGAAAAGTATTGTGTTCAAGTACTGAAGATTTTAATACGGAAAGCAGATGCTGACATCGATGATCTTGAAGAAAATCTGTTGTTGCTTCAATGTAACCTGGCATGGACAGAAAGTAGAAACCAATTTGAAGCATGCTGTACTGCTCTGAGAGAGAAGATTGACGTTCTTGACCATTCAATGAAGAGCTTGAGACAAAGTGATAAGATTAATACAAATGATCAGTCATCATTACATAGACAACAGGCAGAGAAATTGTACGAGATTTTGAAGCCTTTTCTTGGAGACAATTGTGAACAAGATGATGGGCAGGTTTTCTCTGTACTCTCTGACATCTAAAAAGTCGGTGTTCATCAAGTATGAGAAAGAAGACTACCGAAACCTTCATGAAAGCATAAAGCATATATTCATGATTTTACTTTCAATTGTCACGGTCCCGTAAGATACTGCACATAGAGATTTTTGCAAGGGGGATATAATTTTTTTTTGCATTTTTACAGAATGATTTAATCTCTGAAAACTGTTTTAAGTTGCATTTAGTTCTTAGTATTCGTAACTGTTGTACAGTCTATTTAGTAAAAATAATCCGGAAAAAATGACGGAGTGGAGCATGAACCTGGGTCTAGAGGGGCTGGAAGACTGTTTTACCACTAGGCTATTTTCTGGAATTGTTATTATATCCGTTATATATATATAATATAGAGAGGATAAAGTTGAGGGGGACTCGAGCCTCGCTTGGGCCTATACTAAATTCGCCAGTTCTTATACGTGTTGTTCTTTTTTTCTGTTTAAAGAAAGCATGGACAAGAAAAGATATCTTTTATACGAGATTGAATAGAAAAAATAATATATTTTAGGAATTTTTATGTTTTTCTTCCTTAAAATTAAGGCAATGATGTGTGTGCTTCACTAAGAGAGCCTCGCTCATTTGAAGCAAGGTGACGAGGCTGCACCTTGAGCCTACGCACACACTCTTTGACCTATTGCCCATTTGGATGAATATTTTGCTTTGTCATTTGTCAATCTAATATCTTTGAATTAAAAGATATGAGATGTTGCTGCATATTTTCCATTTCTGAGCATTTAGGAGGAAAGTGAAAATTAGCCCTAATCATCATAGGTACTAGCAAAGATGCAATTTTTCTGTAGATCTTAAAGCTAAATAGAATCTCTTGCATAGAGATCGAAATAATAAACAGCTTTTGTACAGTTTTGTGACTGCTCTAAGATGTTCTTTTCATTCTACTTAACATAAATTCAGACAAATATTTATAGAAATATATAGATGGGATGGATCTAACTGTAATATACATCCAGACAGTTGTCTTTTAAAATGTTAATTCTGTTCTATTTTGCACAATATGTCATTCTGATCATGGCCAAGCCATAACTAGATGCTTTACTATAGTTTTGTACCTAGGCTAAAATCTAACTACTGTTGAAGTCCTTTTGTTTTGCTTAGTTGGAAGAAATTGTTCCTTGAATATAGCATCCTGGTAAAAGAACCTCATGGTAAATTGTAAAGTTAGTCACTAGTTTATTGATTAATTGTTAATTTCTGTCATCTGCAGTGAATTTTCTTTCCTTTTTTCCCTTTAAAAATATGTTAATTCTGTTAAAAGGATCAGCATGCAACCGTGAACAACCAAAGTCCTGATACTGAGATGGAGTTGATCAGTCCACTGTGTGAAACCTCAAGCATTTTGGGGTCGAAAGTCAAAAGCGAAGAAACAGGAGTGAAGAGCATTTTGTTGGCAGGGGATACGATGCCCAATGGTTCAGTTCAAAAGCACAAGGAAAATGATTGCATTCACGATATAGAAGTTAAGGTATTATTGCTTTAGTTTCAGTTAGTGTCATGGTGTGTTTAGCTGGATCAAAGGAAGGTAAAGCATTTGTGTGATAGCTCAAATGTTGAACAGTGTAATTAAGTCATAATATGCTTATTAGTCTCCCACTTTGCTTTGTATTCAAACTGTCACTCAATCTTATGATGCTTACATTTTAAATTTTCCTTACAGGCGAAAATTACCACTGGTGGATTTTGCTTAAATTCATTTGTGACTGAAGAAAATAGTTGCTTGAAGACAGACGATCGGAAACTTGTTTCAAAAGTAAAGATTGAGGAAGCTAAGGAACACCTTATAAATAACTCATCCAAGAGCAGAAGATTGAAGTCAGCTTCAAATGTAGTTGGCGAATGCAACCTTCTAAAAGGACAGAAGGTTTGAAAACTTGGTTTTCTTTCAATTTGAAATGTAATTGGGTGCTTTAATTAAAACAAAGTAATGAAGTATTGGGTGACTTTAGCTTTTCAATTAAAGTCTTAACCTTCTTTCAAACAAGCAGCAAGGGAAATCTGTTGCTGAAAAGGCCAACCCAGATGTCCCAAGACAAAGAGATGGACTCAGTGGAAGTAAAAGATCTTTTGATCCCAATATAGAGGAAAAGCTAATTGATTTTTTGTTGAGGACAAAGAGAAACAAGAGTGATGCCGGGCCAGCTCTCCCTCAATCCATTGGAATTGGTGCCTCCTCATGTTTATCTTCAAACACAATAGGGATGGTGGACAACTATCTAAAAGCTTCGGAGACTCCAAAACCTGGTTCATTTGACTCTTCAAATGTTCTTATAATGTTGCTTACAAAACTGCAAGGTCAGCAGGGAAATGTTATGGTCAGAACCCACACCAAGGAGACCGACAAGTTATTGCCGGAAGATTCTAATAATGTTAATGTTTCTCGTGAAAAGTCACATTTGAACATGGATCATAAGCGGAAAGCGTTTACTGAGAGGAGAGGAGAGAGCAAATTACACACTTCTATTTCAAAAGAGAAAAAGAGTCGAAAGACGGGAGCAATTGGAGAAGATGTCTCCTTAGATCGGCCTCTTGAATGGAAGCCTTCTCAGCCCAAGGCTGAGATGCAGGATGGTGCTTTTGACGTTGAGAAGAACTTAGGTCCTTTGTCCCAAAGCAAAGGGACTTCAAAAATGCTGGTTGGTGAAGAGTTTATAGATTTATCTCTTGTTGATACTAGTTCAGATCAAATCAAACCCAACGGTGGAACTGGGGACGACAACCAAACGGTGAAGTCACGTGCCACCATTGACGATCAAATAGCCAAAATTTTAGCACTTTTACCTTCCTCAGCTCTCGAACTGCAGAAACTGACTCTAGTAGATCTGAGGGTTATTGCAAAGGAACTCAATTTGACCAAATATCATAAGCTTCGCAAAACGGTGCTGCTCGATCTGCTTGTTAGCCGGTTGAAAAGCTATTAGGTCAACAACATATTATATTGAGGTTGGTTTGTTTTATTTTGTCTTTAATCAGTTTCTTAGTTTAATGGAAAATCATGTAAGAAAGAAAGGATACACATAGGTCTTGCGCAAGGGGGGGTATTACATTTCATTAGAATGAAAATGCCAAGGTTAAAGAAAATGGAGATATTTAGGAGAATCAGATCTTTATATGGTGTATAGATGTTTTAGATTATGGTGGTAGTTTTGAAATGTTGCTTTTGGTAAATGGGTTGTAGTTTTTTGGTTTATGCTGCCATTTTTATGTACAGAAACCTTCAGCATTTGTGGATTTCAGAAGGCTACGTGTTTAGAGTTGAAAACCTTTTTTTTTTTTTTTTTTAATTATATACATATAGATATATTTTCCTGTGGAAGTTAAAATTTACTTACTTTTTCTTGCTTGTATGTCTCTGAAAAAAGATGAGTTTGTTCCTGTTTTTGTATTAACTTCATACATTTAGTTTAGTTTTTCTTGGATGTTCGTAAAATGCAGGTTGAATCACTTTTTGATCTCCACCATTTTTTTTTCCTGAAAATTTGAATGTGAAGGATTATGGATTTTTTGAGAATCAGGACAAAGTTGGGCGAACTACTCAATGGGAGCCAATGTTAGCGATAAAATGCTTAGAGGAAATGAGGTTAGAAGGTGGAATTCGATATTGTATGAGTTAAGGTATTGGCAACAAATTGCAGTAAAGTTGAGCTATAAAAACAGTCGATGGTTGATGTGTGTGTGCAAGTTCATCTTAACACCTACGAATAGGAAAACGG

mRNA sequence

ATGGACGAGGATCTGTGGGATTGGCCATATGATCAAGGTTTCTCCTTTTTCGATGCCAATGAAAGCAGTTACAATCTGGAATCTGGATGGCAGGCTGATTTTTACTTTGGTAATGGGAAAGATGTTATAGAAGAAAATGCTATGAATGAAAAGTATTGTGTTCAAGTACTGAAGATTTTAATACGGAAAGCAGATGCTGACATCGATGATCTTGAAGAAAATCTGTTGTTGCTTCAATGTAACCTGGCATGGACAGAAAGTAGAAACCAATTTGAAGCATGCTGTACTGCTCTGAGAGAGAAGATTGACGTTCTTGACCATTCAATGAAGAGCTTGAGACAAAGTGATAAGATTAATACAAATGATCAGTCATCATTACATAGACAACAGGCAGAGAAATTGTACGAGATTTTGAAGCCTTTTCTTGGAGACAATTGTGAACAAGATGATGGGCAGGATCAGCATGCAACCGTGAACAACCAAAGTCCTGATACTGAGATGGAGTTGATCAGTCCACTGTGTGAAACCTCAAGCATTTTGGGGTCGAAAGTCAAAAGCGAAGAAACAGGAGTGAAGAGCATTTTGTTGGCAGGGGATACGATGCCCAATGGTTCAGTTCAAAAGCACAAGGAAAATGATTGCATTCACGATATAGAAGTTAAGGCGAAAATTACCACTGGTGGATTTTGCTTAAATTCATTTGTGACTGAAGAAAATAGTTGCTTGAAGACAGACGATCGGAAACTTGTTTCAAAAGTAAAGATTGAGGAAGCTAAGGAACACCTTATAAATAACTCATCCAAGAGCAGAAGATTGAAGTCAGCTTCAAATGTAGTTGGCGAATGCAACCTTCTAAAAGGACAGAAGCAAGGGAAATCTGTTGCTGAAAAGGCCAACCCAGATGTCCCAAGACAAAGAGATGGACTCAGTGGAAGTAAAAGATCTTTTGATCCCAATATAGAGGAAAAGCTAATTGATTTTTTGTTGAGGACAAAGAGAAACAAGAGTGATGCCGGGCCAGCTCTCCCTCAATCCATTGGAATTGGTGCCTCCTCATGTTTATCTTCAAACACAATAGGGATGGTGGACAACTATCTAAAAGCTTCGGAGACTCCAAAACCTGGTTCATTTGACTCTTCAAATGTTCTTATAATGTTGCTTACAAAACTGCAAGGTCAGCAGGGAAATGTTATGGTCAGAACCCACACCAAGGAGACCGACAAGTTATTGCCGGAAGATTCTAATAATGTTAATGTTTCTCGTGAAAAGTCACATTTGAACATGGATCATAAGCGGAAAGCGTTTACTGAGAGGAGAGGAGAGAGCAAATTACACACTTCTATTTCAAAAGAGAAAAAGAGTCGAAAGACGGGAGCAATTGGAGAAGATGTCTCCTTAGATCGGCCTCTTGAATGGAAGCCTTCTCAGCCCAAGGCTGAGATGCAGGATGGTGCTTTTGACGTTGAGAAGAACTTAGGTCCTTTGTCCCAAAGCAAAGGGACTTCAAAAATGCTGGTTGGTGAAGAGTTTATAGATTTATCTCTTGTTGATACTAGTTCAGATCAAATCAAACCCAACGGTGGAACTGGGGACGACAACCAAACGGTGAAGTCACGTGCCACCATTGACGATCAAATAGCCAAAATTTTAGCACTTTTACCTTCCTCAGCTCTCGAACTGCAGAAACTGACTCTAGTAGATCTGAGGGTTATTGCAAAGGAACTCAATTTGACCAAATATCATAAGCTTCGCAAAACGGTGCTGCTCGATCTGCTTGTTAGCCGGTTGAAAAGCTATTAG

Coding sequence (CDS)

ATGGACGAGGATCTGTGGGATTGGCCATATGATCAAGGTTTCTCCTTTTTCGATGCCAATGAAAGCAGTTACAATCTGGAATCTGGATGGCAGGCTGATTTTTACTTTGGTAATGGGAAAGATGTTATAGAAGAAAATGCTATGAATGAAAAGTATTGTGTTCAAGTACTGAAGATTTTAATACGGAAAGCAGATGCTGACATCGATGATCTTGAAGAAAATCTGTTGTTGCTTCAATGTAACCTGGCATGGACAGAAAGTAGAAACCAATTTGAAGCATGCTGTACTGCTCTGAGAGAGAAGATTGACGTTCTTGACCATTCAATGAAGAGCTTGAGACAAAGTGATAAGATTAATACAAATGATCAGTCATCATTACATAGACAACAGGCAGAGAAATTGTACGAGATTTTGAAGCCTTTTCTTGGAGACAATTGTGAACAAGATGATGGGCAGGATCAGCATGCAACCGTGAACAACCAAAGTCCTGATACTGAGATGGAGTTGATCAGTCCACTGTGTGAAACCTCAAGCATTTTGGGGTCGAAAGTCAAAAGCGAAGAAACAGGAGTGAAGAGCATTTTGTTGGCAGGGGATACGATGCCCAATGGTTCAGTTCAAAAGCACAAGGAAAATGATTGCATTCACGATATAGAAGTTAAGGCGAAAATTACCACTGGTGGATTTTGCTTAAATTCATTTGTGACTGAAGAAAATAGTTGCTTGAAGACAGACGATCGGAAACTTGTTTCAAAAGTAAAGATTGAGGAAGCTAAGGAACACCTTATAAATAACTCATCCAAGAGCAGAAGATTGAAGTCAGCTTCAAATGTAGTTGGCGAATGCAACCTTCTAAAAGGACAGAAGCAAGGGAAATCTGTTGCTGAAAAGGCCAACCCAGATGTCCCAAGACAAAGAGATGGACTCAGTGGAAGTAAAAGATCTTTTGATCCCAATATAGAGGAAAAGCTAATTGATTTTTTGTTGAGGACAAAGAGAAACAAGAGTGATGCCGGGCCAGCTCTCCCTCAATCCATTGGAATTGGTGCCTCCTCATGTTTATCTTCAAACACAATAGGGATGGTGGACAACTATCTAAAAGCTTCGGAGACTCCAAAACCTGGTTCATTTGACTCTTCAAATGTTCTTATAATGTTGCTTACAAAACTGCAAGGTCAGCAGGGAAATGTTATGGTCAGAACCCACACCAAGGAGACCGACAAGTTATTGCCGGAAGATTCTAATAATGTTAATGTTTCTCGTGAAAAGTCACATTTGAACATGGATCATAAGCGGAAAGCGTTTACTGAGAGGAGAGGAGAGAGCAAATTACACACTTCTATTTCAAAAGAGAAAAAGAGTCGAAAGACGGGAGCAATTGGAGAAGATGTCTCCTTAGATCGGCCTCTTGAATGGAAGCCTTCTCAGCCCAAGGCTGAGATGCAGGATGGTGCTTTTGACGTTGAGAAGAACTTAGGTCCTTTGTCCCAAAGCAAAGGGACTTCAAAAATGCTGGTTGGTGAAGAGTTTATAGATTTATCTCTTGTTGATACTAGTTCAGATCAAATCAAACCCAACGGTGGAACTGGGGACGACAACCAAACGGTGAAGTCACGTGCCACCATTGACGATCAAATAGCCAAAATTTTAGCACTTTTACCTTCCTCAGCTCTCGAACTGCAGAAACTGACTCTAGTAGATCTGAGGGTTATTGCAAAGGAACTCAATTTGACCAAATATCATAAGCTTCGCAAAACGGTGCTGCTCGATCTGCTTGTTAGCCGGTTGAAAAGCTATTAG

Protein sequence

MDEDLWDWPYDQGFSFFDANESSYNLESGWQADFYFGNGKDVIEENAMNEKYCVQVLKILIRKADADIDDLEENLLLLQCNLAWTESRNQFEACCTALREKIDVLDHSMKSLRQSDKINTNDQSSLHRQQAEKLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEMELISPLCETSSILGSKVKSEETGVKSILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTGGFCLNSFVTEENSCLKTDDRKLVSKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKGQKQGKSVAEKANPDVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIGIGASSCLSSNTIGMVDNYLKASETPKPGSFDSSNVLIMLLTKLQGQQGNVMVRTHTKETDKLLPEDSNNVNVSREKSHLNMDHKRKAFTERRGESKLHTSISKEKKSRKTGAIGEDVSLDRPLEWKPSQPKAEMQDGAFDVEKNLGPLSQSKGTSKMLVGEEFIDLSLVDTSSDQIKPNGGTGDDNQTVKSRATIDDQIAKILALLPSSALELQKLTLVDLRVIAKELNLTKYHKLRKTVLLDLLVSRLKSY*

Homology

[Close]

BLAST of Csa4G338980 vs. TrEMBL
Match: A0A0A0KY13_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G338980 PE=4 SV=1)

HSP 1 Score: 1188.3 bits (3073), Expect = 0.0e+00
Identity = 599/599 (100.00%), Postives = 599/599 (100.00%), Query Frame = 1


Query: 1   MDEDLWDWPYDQGFSFFDANESSYNLESGWQADFYFGNGKDVIEENAMNEKYCVQVLKIL 60
           MDEDLWDWPYDQGFSFFDANESSYNLESGWQADFYFGNGKDVIEENAMNEKYCVQVLKIL
Sbjct: 1   MDEDLWDWPYDQGFSFFDANESSYNLESGWQADFYFGNGKDVIEENAMNEKYCVQVLKIL 60

Query: 61  IRKADADIDDLEENLLLLQCNLAWTESRNQFEACCTALREKIDVLDHSMKSLRQSDKINT 120
           IRKADADIDDLEENLLLLQCNLAWTESRNQFEACCTALREKIDVLDHSMKSLRQSDKINT
Sbjct: 61  IRKADADIDDLEENLLLLQCNLAWTESRNQFEACCTALREKIDVLDHSMKSLRQSDKINT 120

Query: 121 NDQSSLHRQQAEKLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEMELISPLCETSSIL 180
           NDQSSLHRQQAEKLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEMELISPLCETSSIL
Sbjct: 121 NDQSSLHRQQAEKLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEMELISPLCETSSIL 180

Query: 181 GSKVKSEETGVKSILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTGGFCLNSFVTEENS 240
           GSKVKSEETGVKSILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTGGFCLNSFVTEENS
Sbjct: 181 GSKVKSEETGVKSILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTGGFCLNSFVTEENS 240

Query: 241 CLKTDDRKLVSKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKGQKQGKSVAEKANP 300
           CLKTDDRKLVSKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKGQKQGKSVAEKANP
Sbjct: 241 CLKTDDRKLVSKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKGQKQGKSVAEKANP 300

Query: 301 DVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIGIGASSCLSSNTIG 360
           DVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIGIGASSCLSSNTIG
Sbjct: 301 DVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIGIGASSCLSSNTIG 360

Query: 361 MVDNYLKASETPKPGSFDSSNVLIMLLTKLQGQQGNVMVRTHTKETDKLLPEDSNNVNVS 420
           MVDNYLKASETPKPGSFDSSNVLIMLLTKLQGQQGNVMVRTHTKETDKLLPEDSNNVNVS
Sbjct: 361 MVDNYLKASETPKPGSFDSSNVLIMLLTKLQGQQGNVMVRTHTKETDKLLPEDSNNVNVS 420

Query: 421 REKSHLNMDHKRKAFTERRGESKLHTSISKEKKSRKTGAIGEDVSLDRPLEWKPSQPKAE 480
           REKSHLNMDHKRKAFTERRGESKLHTSISKEKKSRKTGAIGEDVSLDRPLEWKPSQPKAE
Sbjct: 421 REKSHLNMDHKRKAFTERRGESKLHTSISKEKKSRKTGAIGEDVSLDRPLEWKPSQPKAE 480

Query: 481 MQDGAFDVEKNLGPLSQSKGTSKMLVGEEFIDLSLVDTSSDQIKPNGGTGDDNQTVKSRA 540
           MQDGAFDVEKNLGPLSQSKGTSKMLVGEEFIDLSLVDTSSDQIKPNGGTGDDNQTVKSRA
Sbjct: 481 MQDGAFDVEKNLGPLSQSKGTSKMLVGEEFIDLSLVDTSSDQIKPNGGTGDDNQTVKSRA 540

Query: 541 TIDDQIAKILALLPSSALELQKLTLVDLRVIAKELNLTKYHKLRKTVLLDLLVSRLKSY 600
           TIDDQIAKILALLPSSALELQKLTLVDLRVIAKELNLTKYHKLRKTVLLDLLVSRLKSY
Sbjct: 541 TIDDQIAKILALLPSSALELQKLTLVDLRVIAKELNLTKYHKLRKTVLLDLLVSRLKSY 599

[Close]

BLAST of Csa4G338980 vs. TrEMBL
Match: A5AZY9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026888 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 8.8e-32
Identity = 134/492 (27.24%), Postives = 228/492 (46.34%), Query Frame = 1


Query: 16  FFDANESSYNLESGWQADFYFGNGKDVIEENAMNEKYCVQVLKILIRKADADIDDLEENL 75
           F  A ESSY +  GWQ DFYFG G DVIEE+A+NEK CVQVL++LI KAD +I++LE++L
Sbjct: 11  FSVAPESSYPMHPGWQCDFYFGYGLDVIEEDALNEKSCVQVLRVLISKADTEIEELEKDL 70

Query: 76  LLLQCNLAWTESRNQFEACCTALREKIDVLDHSMKSLRQSDKINTNDQSSLHRQQAEKLY 135
           ++LQ  LAW E+R   E C T+LREKI+ LD S++SL+  ++ + N    + R+ AE+++
Sbjct: 71  VILQSELAWAENREWSEICSTSLREKINCLDISIQSLKNENERDINVHLLMRREPAERIH 130

Query: 136 EILKPFLGDNCEQDDGQDQHATVNNQSPDTEME-----LISPLCETSSILGSKVKSEETG 195
           EI+K  L   C ++D Q+Q   +  +   ++M+     L     + S    + +      
Sbjct: 131 EIIKVLLRRYCLENDEQEQRPVIIIKQSSSDMQEHATNLSDEKKKLSDFDSNIINVGRKE 190

Query: 196 VKSILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTGGFCLNSFVTEENSCLKTDDRKLV 255
             + ++   T+ N S++ H   +   ++   A IT      ++   +E+ C  + + K  
Sbjct: 191 SSTTIIERFTIFNSSLKPHGTKENCAEMVKAANITIENSGTDT-SNQESGC--SSENKKF 250

Query: 256 SKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKGQKQGKSVAEKANPDVPRQRDGLS 315
           S    +  KE + ++S+ +  +     V+ E +L     +G+ V EKA P      D   
Sbjct: 251 SNSCFKITKEEVQHSSTPTPDI-----VILESSLKPEGNRGE-VDEKAEPSSIVVEDFSL 310

Query: 316 GSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIGIGASSCLSSNTIGMVDNYLKASE 375
            +    + N +EK     L TK +     P +     I  S   SS + G   NY K  +
Sbjct: 311 DALEHSNNNSDEKGKQCKLNTKDD-----PTVTDDYKILIS---SSKSGGKRKNYQKVVK 370

Query: 376 TPKPGSFDSSNVLIMLLTKLQGQQGNVMVRTHTKETDKLLPEDSNNVNVSREKSHL---N 435
                   +S+ +   +    G  G          +D L   +S   +V  + S+     
Sbjct: 371 PTNVVENSNSDAVRCEI----GLDGKKKSYKSISRSDVLTQTNSGGADVKPKISNFPLKT 430

Query: 436 MDHKRKAFTERRGESKLHTSISKEKKSRKTGAIGEDVSLDRPLEWKPSQPKAEMQDGAFD 495
           +  K    ++    +K+ ++ S  +  +K+  + E V  D   E       +E+QD    
Sbjct: 431 VQEKTVNGSKVAASNKIDSAKSSPRPDKKSMTVQEVVISDN--EHSAVNSLSELQDQIRK 479

Query: 496 VEKNLGPLSQSK 500
               L P  + K
Sbjct: 491 DTTELHPEEEGK 479

[Close]

BLAST of Csa4G338980 vs. TrEMBL
Match: A5AZY9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026888 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 6.1e-09
Identity = 130/612 (21.24%), Postives = 231/612 (37.75%), Query Frame = 1


Query: 55  QVLKILIRKADADIDDLEENLLLLQCNLAWTESRNQFEACCTALREKIDVLDHSMKSLRQ 114
           +++K+L+R+   + D+ E+  +++                    +   D+ +H+     +
Sbjct: 131 EIIKVLLRRYCLENDEQEQRPVII------------------IKQSSSDMQEHATNLSDE 190

Query: 115 SDKINTNDQSSLHRQQAEKLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEMELISPLC 174
             K++  D + ++  + E    I++ F   N         H T  N +     E++    
Sbjct: 191 KKKLSDFDSNIINVGRKESSTTIIERFTIFN----SSLKPHGTKENCA-----EMVKAAN 250

Query: 175 ETSSILGSKVKSEETGVKSILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTGGFCLNSF 234
            T    G+   ++E+G  S         N   +  KE     +++  +  T     L S 
Sbjct: 251 ITIENSGTDTSNQESGCSS---ENKKFSNSCFKITKE-----EVQHSSTPTPDIVILESS 310

Query: 235 VTEENSCLKTDDRKLVSKVKIEE----AKEHLINNSSKSRR------------------L 294
           +  E +  + D++   S + +E+    A EH  NNS +  +                  L
Sbjct: 311 LKPEGNRGEVDEKAEPSSIVVEDFSLDALEHSNNNSDEKGKQCKLNTKDDPTVTDDYKIL 370

Query: 295 KSASNVVGECNLLKGQKQGKSVAEKANPDVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTK 354
            S+S   G+    +   +  +V E +N D  R   GL G K+S+         D L +T 
Sbjct: 371 ISSSKSGGKRKNYQKVVKPTNVVENSNSDAVRCEIGLDGKKKSYKSISRS---DVLTQTN 430

Query: 355 RNKSDAGPALP-------QSIGIGASSCLSSNTIGMVDNYLKASETPKPGSF-------- 414
              +D  P +        Q   +  S   +SN I       K+S  P   S         
Sbjct: 431 SGGADVKPKISNFPLKTVQEKTVNGSKVAASNKIDSA----KSSPRPDKKSMTVQEVVIS 490

Query: 415 DSSNVLIMLLTKLQGQQGNVMVRTHTKETDK-------------------LLPEDSNNVN 474
           D+ +  +  L++LQ Q        H +E  K                   L P   +   
Sbjct: 491 DNEHSAVNSLSELQDQIRKDTTELHPEEEGKPQAEKIQKAKTLANDQESILCPSLKSPKP 550

Query: 475 VSREKSHLNMDHKRKAFTERRGESKLHTSISKEKKSRKTGAIGEDVSLDRPLEWKPSQPK 534
            ++ K   N    ++A           +S SK K+ RK     ++VSL   L+ K  +  
Sbjct: 551 KAKRKIQSNQLSVQEAGLPPTEGGLNSSSASKVKRRRKFRISKDNVSLKELLDVKILK-N 610

Query: 535 AEMQDGAFDVEKNLGP--------LSQSKGTS--KMLVGEEFIDLSLVDTSSD-QIKPNG 594
             +Q+   D E +L P        LSQ +     K+ + +E  D +  +  S        
Sbjct: 611 LVLQNSCEDDEPDLTPDDSENSVLLSQKRSIKSLKLPILKELEDSTTYNKLSKLHTDTTD 670

Query: 595 GTGDDNQTVKSRATIDDQIAKILALLPSSA---LELQKLTLVDLRVIAKELNLTKYHKLR 597
           G G  +  + +  +IDD   + +  LP      L L+K+ LVDLR +AK+ N+TKYHKLR
Sbjct: 671 GAGKQDLLIINSCSIDDSHDETIKSLPCPTPRRLSLEKMKLVDLRAMAKQHNMTKYHKLR 699

HSP 2 Score: 141.0 bits (354), Expect = 4.8e-30
Identity = 152/573 (26.53%), Postives = 244/573 (42.58%), Query Frame = 1


Query: 21  ESSYNLESGWQADFYFGNGKDVIEENAMNEKYCVQVLKILIRKADADIDDLEENLLLLQC 80
           ES   ++ GWQ DFYFG G D++EENA+NEK CVQVL+ILI KAD +ID+LE++L+LLQ 
Sbjct: 14  ESRCCIQPGWQCDFYFGYGFDMVEENALNEKSCVQVLRILITKADTEIDELEKDLVLLQS 73

Query: 81  NLAWTESRNQFEACCTALREKIDVLDHSMKSLRQSDKINTNDQSSLHRQQAEKLYEILKP 140
            LAW E     + CC  LR KID LD S++ LR  D+ +      +H +  EKL EI+K 
Sbjct: 74  ELAWAEHEEWSDICCNTLRAKIDCLDISIRKLRNKDENDIEFYLLMHTEPVEKLNEIVKA 133

Query: 141 FLGDNCEQDDGQDQHATVNNQ---SPDTEMELISPLCETSSILGSKVKSEETG--VKSIL 200
            L   C   D Q Q   V +    SP+   +L       +S      K E  G  V S  
Sbjct: 134 LLKSFCHGKDEQRQDVVVLDSSCGSPEQSADLHKNQKLRTSDSHFIAKEEFNGPIVTSSK 193

Query: 201 LAGDTMPNGSVQKHKENDCIHDIEVKAKITTGGFCLNSFVTEENSCLKTDDRKLVSKVKI 260
               +     ++K K N C    E  A         +S     +   + D++K+V+ + +
Sbjct: 194 NCTSSKSYTEIEKKKAN-C---SETLATTNVKNVIPHSLAPVAD---QFDEKKVVTNLDL 253

Query: 261 EEAKEHLINNSSKSRRLKSASNVVGECNLLKGQKQGKSVAEKANPDVPR----QRDGLSG 320
           E  K+  I +   + + K   NV+   +    QK+     ++A    P        GL  
Sbjct: 254 ETTKKQGIKDCGLTLKDK---NVIQNSSSKSAQKR-MHEPDRAKVKEPAAQVVNNSGLDA 313

Query: 321 SKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIGIGASSCL----SSNTIGMVDNYLK 380
           SKRS D ++ +K         R K ++  A   +  I AS  L    SSN  G   +  +
Sbjct: 314 SKRSAD-HLNKK------SASRLKIESEEATVHT-SISASDILILDSSSNPRGKRADLSR 373

Query: 381 ASETPKPGSFDSSNVLIMLLTKLQGQQGNV-MVRTHTKETDKLLPEDSNNVNVSREK--- 440
             +  +P +  + +   +   +  G    + M+  H  + +    ++     + + K   
Sbjct: 374 KVKDEQPANIIAKDFDSVACKQTTGHSNEMKMLCKHDLKVNGCEVQEHYTTTIGKSKITN 433

Query: 441 SHLNMDHKRKAFTERRGESKLHTSISKEKKSRKTGAIGEDVSLDRPLEWKPSQPKAEMQD 500
           S LN +HK       +  + +  +IS +     TG  G+  + D  L         + + 
Sbjct: 434 SCLNFEHKGNILKADKPANAVVKTISPDTLRHATGLNGKGNNSDSRL-----GAVGQAES 493

Query: 501 GAFDVEKNLGPLSQSKGTSKMLVGEEFIDLSLVDTSSDQIKPNGGTGDDNQTVKSRATID 560
              D+E+ L   +      + +   +F      + S+   K  G   D  Q VK +   +
Sbjct: 494 LNCDMEQKLCDFAVKSARKRGIKELKFASTEQKEPSNSFFKGEGKRKDSLQVVKRK---E 553

Query: 561 DQIAKILALLPSSALELQKLTLVDLRVIAKELN 577
             ++       +S LELQ     D  ++  E N
Sbjct: 554 SPLSDNEHFALTSLLELQDERGKDKTILQMEGN 559

[Close]

BLAST of Csa4G338980 vs. TrEMBL
Match: A0A061EX46_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024613 PE=4 SV=1)

HSP 1 Score: 41.6 bits (96), Expect = 4.0e+00
Identity = 27/70 (38.57%), Postives = 36/70 (51.43%), Query Frame = 1


Query: 526 NGGTGDDNQTVKSRATIDDQIAKILALLPSSALELQKLTLVDLRVIAKELNLTKYHKLRK 585
           NG T   + ++ S A++D    K +   P     L K+ L DLR IAK   LTKY  LRK
Sbjct: 705 NGSTAKTDISI-SEASVDGSCIKGVTPQPFDTSNLMKMKLCDLRAIAKAQKLTKYSGLRK 764

Query: 586 TVLLDLLVSR 596
             L+  L +R
Sbjct: 765 EDLVKQLENR 773

HSP 2 Score: 138.7 bits (348), Expect = 2.4e-29
Identity = 114/380 (30.00%), Postives = 178/380 (46.84%), Query Frame = 1


Query: 13  GFSFFDANESSYNLESGWQADFYFGNGKDVIEENAMNEKYCVQVLKILIRKADADIDDLE 72
           G SF +   SS+ +++ WQ D YFG G D+IEENA+NEK C+QVL+ILI KAD +ID+LE
Sbjct: 7   GTSFTEEENSSF-IQTEWQYDLYFGYGIDMIEENALNEKSCIQVLRILIAKADTEIDELE 66

Query: 73  ENLLLLQCNLAWTESRNQFEACCTALREKIDVLDHSMKSLRQSDKINTNDQSSLHRQQAE 132
           ++L+LLQ  L W E     + CC ALR KI+ LD S++ LR  D+ +      +H +  E
Sbjct: 67  KDLVLLQSELVWAEHEEWHDICCNALRAKINCLDISIRKLRNKDENDIEVYLLMHTEPVE 126

Query: 133 KLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEMELISPLCETSSILGSKVKSEETGVK 192
           KL+EI+K  L   C +   Q      N QS D   +  S   E S+ L    K+++    
Sbjct: 127 KLHEIMKSLLKSFCNEKHEQ------NEQSQDVVPDSRSSSLEQSAAL---YKNQKLNSS 186

Query: 193 SILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTGGFCLNSFVTEENSCLKT-------- 252
                     NG     KEN    +  ++ ++       NS  T  N+ +K         
Sbjct: 187 DSCFIAKEENNGPNVTPKENFTSSNRSMELEVKKA----NSSETLANADVKDLMPHFLLP 246

Query: 253 -----DDRKLVSKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKGQKQGKSVAEKAN 312
                D++ +++ + +E  K+  +  S  + + K   NVV   +L   QK+      K N
Sbjct: 247 AAGQFDEKSIITLLDLETTKK--LKESGCALKDK---NVVRHFSLKSAQKR------KNN 306

Query: 313 PDVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQS----IGIGASSCL- 372
           P   + +D  +      D +  +     L + K+  S +   L +       I A+  L 
Sbjct: 307 PYRTKVKDAAAQCVNDSDLDASKHSAGRLKKKKKTSSSSLKILSEQATKHTSISAADMLI 361

[Close]

BLAST of Csa4G338980 vs. TrEMBL
Match: A0A0D2QD14_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G146100 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 5.3e-29
Identity = 113/376 (30.05%), Postives = 176/376 (46.81%), Query Frame = 1


Query: 13  GFSFFDANESSYNLESGWQADFYFGNGKDVIEENAMNEKYCVQVLKILIRKADADIDDLE 72
           G SF +   SS+ +++ WQ D YFG G D+IEENA+NEK C+QVL+ILI KAD +ID+LE
Sbjct: 7   GTSFTEEENSSF-IQTEWQYDLYFGYGIDMIEENALNEKSCIQVLRILIAKADTEIDELE 66

Query: 73  ENLLLLQCNLAWTESRNQFEACCTALREKIDVLDHSMKSLRQSDKINTNDQSSLHRQQAE 132
           ++L+LLQ  L W E     + CC ALR KI+ LD S++ LR  D+ +      +H +  E
Sbjct: 67  KDLVLLQSELVWAEHEEWHDICCNALRAKINCLDISIRKLRNKDENDIEVYLLMHTEPVE 126

Query: 133 KLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEMELISPLCETSSILGSKVKSEETGVK 192
           KL+EI+K  L   C +   Q      N QS D   +  S   E S+ L    K+++    
Sbjct: 127 KLHEIMKSLLKSFCNEKHEQ------NEQSQDVVPDSRSSSLEQSAAL---YKNQKLNSS 186

Query: 193 SILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTGGFCLNSFVTEENSCLKT-------- 252
                     NG     KEN    +  ++ ++       NS  T  N+ +K         
Sbjct: 187 DSCFIAKEENNGPNVTPKENFTSSNRSMELEVKKA----NSSETLANADVKDLMPHFLLP 246

Query: 253 -----DDRKLVSKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKGQKQGKSVAEKAN 312
                D++ +++ + +E  K+  +  S  + + K   NVV   +L   QK+      K N
Sbjct: 247 AAGQFDEKSIITLLDLETTKK--LKESGCALKDK---NVVRHFSLKSAQKR------KNN 306

Query: 313 PDVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQS----IGIGASSCL- 368
           P   + +D  +      D +  +     L + K+  S +   L +       I A+  L 
Sbjct: 307 PYRTKVKDAAAQCVNDSDLDASKHSAGRLKKKKKTSSSSLKILSEQATKHTSISAADMLI 357

[Close]

BLAST of Csa4G338980 vs. NCBI nr
Match: gi|778694149|ref|XP_011653753.1| (PREDICTED: uncharacterized protein LOC105434402 isoform X1 [Cucumis sativus])

HSP 1 Score: 1188.3 bits (3073), Expect = 0.0e+00
Identity = 599/599 (100.00%), Postives = 599/599 (100.00%), Query Frame = 1


Query: 1   MDEDLWDWPYDQGFSFFDANESSYNLESGWQADFYFGNGKDVIEENAMNEKYCVQVLKIL 60
           MDEDLWDWPYDQGFSFFDANESSYNLESGWQADFYFGNGKDVIEENAMNEKYCVQVLKIL
Sbjct: 1   MDEDLWDWPYDQGFSFFDANESSYNLESGWQADFYFGNGKDVIEENAMNEKYCVQVLKIL 60

Query: 61  IRKADADIDDLEENLLLLQCNLAWTESRNQFEACCTALREKIDVLDHSMKSLRQSDKINT 120
           IRKADADIDDLEENLLLLQCNLAWTESRNQFEACCTALREKIDVLDHSMKSLRQSDKINT
Sbjct: 61  IRKADADIDDLEENLLLLQCNLAWTESRNQFEACCTALREKIDVLDHSMKSLRQSDKINT 120

Query: 121 NDQSSLHRQQAEKLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEMELISPLCETSSIL 180
           NDQSSLHRQQAEKLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEMELISPLCETSSIL
Sbjct: 121 NDQSSLHRQQAEKLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEMELISPLCETSSIL 180

Query: 181 GSKVKSEETGVKSILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTGGFCLNSFVTEENS 240
           GSKVKSEETGVKSILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTGGFCLNSFVTEENS
Sbjct: 181 GSKVKSEETGVKSILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTGGFCLNSFVTEENS 240

Query: 241 CLKTDDRKLVSKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKGQKQGKSVAEKANP 300
           CLKTDDRKLVSKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKGQKQGKSVAEKANP
Sbjct: 241 CLKTDDRKLVSKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKGQKQGKSVAEKANP 300

Query: 301 DVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIGIGASSCLSSNTIG 360
           DVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIGIGASSCLSSNTIG
Sbjct: 301 DVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIGIGASSCLSSNTIG 360

Query: 361 MVDNYLKASETPKPGSFDSSNVLIMLLTKLQGQQGNVMVRTHTKETDKLLPEDSNNVNVS 420
           MVDNYLKASETPKPGSFDSSNVLIMLLTKLQGQQGNVMVRTHTKETDKLLPEDSNNVNVS
Sbjct: 361 MVDNYLKASETPKPGSFDSSNVLIMLLTKLQGQQGNVMVRTHTKETDKLLPEDSNNVNVS 420

Query: 421 REKSHLNMDHKRKAFTERRGESKLHTSISKEKKSRKTGAIGEDVSLDRPLEWKPSQPKAE 480
           REKSHLNMDHKRKAFTERRGESKLHTSISKEKKSRKTGAIGEDVSLDRPLEWKPSQPKAE
Sbjct: 421 REKSHLNMDHKRKAFTERRGESKLHTSISKEKKSRKTGAIGEDVSLDRPLEWKPSQPKAE 480

Query: 481 MQDGAFDVEKNLGPLSQSKGTSKMLVGEEFIDLSLVDTSSDQIKPNGGTGDDNQTVKSRA 540
           MQDGAFDVEKNLGPLSQSKGTSKMLVGEEFIDLSLVDTSSDQIKPNGGTGDDNQTVKSRA
Sbjct: 481 MQDGAFDVEKNLGPLSQSKGTSKMLVGEEFIDLSLVDTSSDQIKPNGGTGDDNQTVKSRA 540

Query: 541 TIDDQIAKILALLPSSALELQKLTLVDLRVIAKELNLTKYHKLRKTVLLDLLVSRLKSY 600
           TIDDQIAKILALLPSSALELQKLTLVDLRVIAKELNLTKYHKLRKTVLLDLLVSRLKSY
Sbjct: 541 TIDDQIAKILALLPSSALELQKLTLVDLRVIAKELNLTKYHKLRKTVLLDLLVSRLKSY 599

[Close]

BLAST of Csa4G338980 vs. NCBI nr
Match: gi|778694152|ref|XP_011653754.1| (PREDICTED: uncharacterized protein LOC105434402 isoform X2 [Cucumis sativus])

HSP 1 Score: 1129.0 bits (2919), Expect = 0.0e+00
Identity = 575/599 (95.99%), Postives = 575/599 (95.99%), Query Frame = 1


Query: 1   MDEDLWDWPYDQGFSFFDANESSYNLESGWQADFYFGNGKDVIEENAMNEKYCVQVLKIL 60
           MDEDLWDWPYDQGFSFFDANESSYNLESGWQADFYFGNGKD                   
Sbjct: 1   MDEDLWDWPYDQGFSFFDANESSYNLESGWQADFYFGNGKD------------------- 60

Query: 61  IRKADADIDDLEENLLLLQCNLAWTESRNQFEACCTALREKIDVLDHSMKSLRQSDKINT 120
                ADIDDLEENLLLLQCNLAWTESRNQFEACCTALREKIDVLDHSMKSLRQSDKINT
Sbjct: 61  -----ADIDDLEENLLLLQCNLAWTESRNQFEACCTALREKIDVLDHSMKSLRQSDKINT 120

Query: 121 NDQSSLHRQQAEKLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEMELISPLCETSSIL 180
           NDQSSLHRQQAEKLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEMELISPLCETSSIL
Sbjct: 121 NDQSSLHRQQAEKLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEMELISPLCETSSIL 180

Query: 181 GSKVKSEETGVKSILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTGGFCLNSFVTEENS 240
           GSKVKSEETGVKSILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTGGFCLNSFVTEENS
Sbjct: 181 GSKVKSEETGVKSILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTGGFCLNSFVTEENS 240

Query: 241 CLKTDDRKLVSKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKGQKQGKSVAEKANP 300
           CLKTDDRKLVSKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKGQKQGKSVAEKANP
Sbjct: 241 CLKTDDRKLVSKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKGQKQGKSVAEKANP 300

Query: 301 DVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIGIGASSCLSSNTIG 360
           DVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIGIGASSCLSSNTIG
Sbjct: 301 DVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIGIGASSCLSSNTIG 360

Query: 361 MVDNYLKASETPKPGSFDSSNVLIMLLTKLQGQQGNVMVRTHTKETDKLLPEDSNNVNVS 420
           MVDNYLKASETPKPGSFDSSNVLIMLLTKLQGQQGNVMVRTHTKETDKLLPEDSNNVNVS
Sbjct: 361 MVDNYLKASETPKPGSFDSSNVLIMLLTKLQGQQGNVMVRTHTKETDKLLPEDSNNVNVS 420

Query: 421 REKSHLNMDHKRKAFTERRGESKLHTSISKEKKSRKTGAIGEDVSLDRPLEWKPSQPKAE 480
           REKSHLNMDHKRKAFTERRGESKLHTSISKEKKSRKTGAIGEDVSLDRPLEWKPSQPKAE
Sbjct: 421 REKSHLNMDHKRKAFTERRGESKLHTSISKEKKSRKTGAIGEDVSLDRPLEWKPSQPKAE 480

Query: 481 MQDGAFDVEKNLGPLSQSKGTSKMLVGEEFIDLSLVDTSSDQIKPNGGTGDDNQTVKSRA 540
           MQDGAFDVEKNLGPLSQSKGTSKMLVGEEFIDLSLVDTSSDQIKPNGGTGDDNQTVKSRA
Sbjct: 481 MQDGAFDVEKNLGPLSQSKGTSKMLVGEEFIDLSLVDTSSDQIKPNGGTGDDNQTVKSRA 540

Query: 541 TIDDQIAKILALLPSSALELQKLTLVDLRVIAKELNLTKYHKLRKTVLLDLLVSRLKSY 600
           TIDDQIAKILALLPSSALELQKLTLVDLRVIAKELNLTKYHKLRKTVLLDLLVSRLKSY
Sbjct: 541 TIDDQIAKILALLPSSALELQKLTLVDLRVIAKELNLTKYHKLRKTVLLDLLVSRLKSY 575

[Close]

BLAST of Csa4G338980 vs. NCBI nr
Match: gi|778694155|ref|XP_011653755.1| (PREDICTED: uncharacterized protein LOC105434402 isoform X3 [Cucumis sativus])

HSP 1 Score: 1084.3 bits (2803), Expect = 0.0e+00
Identity = 552/552 (100.00%), Postives = 552/552 (100.00%), Query Frame = 1


Query: 48  MNEKYCVQVLKILIRKADADIDDLEENLLLLQCNLAWTESRNQFEACCTALREKIDVLDH 107
           MNEKYCVQVLKILIRKADADIDDLEENLLLLQCNLAWTESRNQFEACCTALREKIDVLDH
Sbjct: 1   MNEKYCVQVLKILIRKADADIDDLEENLLLLQCNLAWTESRNQFEACCTALREKIDVLDH 60

Query: 108 SMKSLRQSDKINTNDQSSLHRQQAEKLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEM 167
           SMKSLRQSDKINTNDQSSLHRQQAEKLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEM
Sbjct: 61  SMKSLRQSDKINTNDQSSLHRQQAEKLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEM 120

Query: 168 ELISPLCETSSILGSKVKSEETGVKSILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTG 227
           ELISPLCETSSILGSKVKSEETGVKSILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTG
Sbjct: 121 ELISPLCETSSILGSKVKSEETGVKSILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTG 180

Query: 228 GFCLNSFVTEENSCLKTDDRKLVSKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKG 287
           GFCLNSFVTEENSCLKTDDRKLVSKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKG
Sbjct: 181 GFCLNSFVTEENSCLKTDDRKLVSKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKG 240

Query: 288 QKQGKSVAEKANPDVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIG 347
           QKQGKSVAEKANPDVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIG
Sbjct: 241 QKQGKSVAEKANPDVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIG 300

Query: 348 IGASSCLSSNTIGMVDNYLKASETPKPGSFDSSNVLIMLLTKLQGQQGNVMVRTHTKETD 407
           IGASSCLSSNTIGMVDNYLKASETPKPGSFDSSNVLIMLLTKLQGQQGNVMVRTHTKETD
Sbjct: 301 IGASSCLSSNTIGMVDNYLKASETPKPGSFDSSNVLIMLLTKLQGQQGNVMVRTHTKETD 360

Query: 408 KLLPEDSNNVNVSREKSHLNMDHKRKAFTERRGESKLHTSISKEKKSRKTGAIGEDVSLD 467
           KLLPEDSNNVNVSREKSHLNMDHKRKAFTERRGESKLHTSISKEKKSRKTGAIGEDVSLD
Sbjct: 361 KLLPEDSNNVNVSREKSHLNMDHKRKAFTERRGESKLHTSISKEKKSRKTGAIGEDVSLD 420

Query: 468 RPLEWKPSQPKAEMQDGAFDVEKNLGPLSQSKGTSKMLVGEEFIDLSLVDTSSDQIKPNG 527
           RPLEWKPSQPKAEMQDGAFDVEKNLGPLSQSKGTSKMLVGEEFIDLSLVDTSSDQIKPNG
Sbjct: 421 RPLEWKPSQPKAEMQDGAFDVEKNLGPLSQSKGTSKMLVGEEFIDLSLVDTSSDQIKPNG 480

Query: 528 GTGDDNQTVKSRATIDDQIAKILALLPSSALELQKLTLVDLRVIAKELNLTKYHKLRKTV 587
           GTGDDNQTVKSRATIDDQIAKILALLPSSALELQKLTLVDLRVIAKELNLTKYHKLRKTV
Sbjct: 481 GTGDDNQTVKSRATIDDQIAKILALLPSSALELQKLTLVDLRVIAKELNLTKYHKLRKTV 540

Query: 588 LLDLLVSRLKSY 600
           LLDLLVSRLKSY
Sbjct: 541 LLDLLVSRLKSY 552

[Close]

BLAST of Csa4G338980 vs. NCBI nr
Match: gi|659129283|ref|XP_008464610.1| (PREDICTED: uncharacterized protein LOC103502451 isoform X1 [Cucumis melo])

HSP 1 Score: 830.9 bits (2145), Expect = 1.5e-237
Identity = 418/455 (91.87%), Postives = 430/455 (94.51%), Query Frame = 1


Query: 1   MDEDLWDWPYDQGFSFFDANESSYNLESGWQADFYFGNGKDVIEENAMNEKYCVQVLKIL 60
           MD+DLWDWPYDQGFSFFDA+ESSYNLESGWQADFYFGNGKDVIEENAMNEKYCVQVLKIL
Sbjct: 1   MDDDLWDWPYDQGFSFFDADESSYNLESGWQADFYFGNGKDVIEENAMNEKYCVQVLKIL 60

Query: 61  IRKADADIDDLEENLLLLQCNLAWTESRNQFEACCTALREKIDVLDHSMKSLRQSDKINT 120
           IRKADADIDDLEENLLLL C+LAWTESRNQ EACC ALREKIDVLDHSMKS RQSDKINT
Sbjct: 61  IRKADADIDDLEENLLLLHCDLAWTESRNQLEACCNALREKIDVLDHSMKSWRQSDKINT 120

Query: 121 NDQSSLHRQQAEKLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEMELISPLCETSSIL 180
           NDQSSLHRQQAEKLYEILKPFLGD+CEQDDGQDQHATVNN+SPDTEMELISPLCETSSI 
Sbjct: 121 NDQSSLHRQQAEKLYEILKPFLGDDCEQDDGQDQHATVNNRSPDTEMELISPLCETSSIP 180

Query: 181 GSKVKSEETGVKSILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTGGFCLNSFVTEENS 240
           GSKVK EETGVKSILLA D MPNGSV+KHKEND IHDIEVK +I TGG  LNSFVTEENS
Sbjct: 181 GSKVKREETGVKSILLAVDAMPNGSVRKHKENDSIHDIEVKPRIVTGGVRLNSFVTEENS 240

Query: 241 CLKTDDRKLVSKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKGQKQGKSVAEKANP 300
           CLK D+ K VSKVKIEEAKEHLINNS KSRRLKSASNVVGE NLLKGQKQGKSVAEKANP
Sbjct: 241 CLKPDNLKPVSKVKIEEAKEHLINNSFKSRRLKSASNVVGERNLLKGQKQGKSVAEKANP 300

Query: 301 DVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIGIGASSCLSSNTIG 360
           DVPRQRDGLSG+KRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIG GASSCLSSNT G
Sbjct: 301 DVPRQRDGLSGNKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIGSGASSCLSSNTKG 360

Query: 361 MVDNYLKASETPKPGSFDSSNVLIMLLTKLQGQQGNVMVRTHTKETDKLLPEDSNNVNVS 420
           MVDNYLK SETPKPGSFDSSNVL+MLLTKLQGQQGNVMVRT TKETDKLLPEDS NVNVS
Sbjct: 361 MVDNYLKVSETPKPGSFDSSNVLVMLLTKLQGQQGNVMVRTRTKETDKLLPEDSKNVNVS 420

Query: 421 REKSHLNMDHKRKAFTERRGESKLHTSISKEKKSR 456
           REKSHLNMDHK+KAFTE RGESKLHTSISKEK+ R
Sbjct: 421 REKSHLNMDHKQKAFTEWRGESKLHTSISKEKRLR 455

[Close]

BLAST of Csa4G338980 vs. NCBI nr
Match: gi|659129289|ref|XP_008464613.1| (PREDICTED: uncharacterized protein LOC103502451 isoform X2 [Cucumis melo])

HSP 1 Score: 729.9 bits (1883), Expect = 3.5e-207
Identity = 373/408 (91.42%), Postives = 383/408 (93.87%), Query Frame = 1


Query: 48  MNEKYCVQVLKILIRKADADIDDLEENLLLLQCNLAWTESRNQFEACCTALREKIDVLDH 107
           MNEKYCVQVLKILIRKADADIDDLEENLLLL C+LAWTESRNQ EACC ALREKIDVLDH
Sbjct: 1   MNEKYCVQVLKILIRKADADIDDLEENLLLLHCDLAWTESRNQLEACCNALREKIDVLDH 60

Query: 108 SMKSLRQSDKINTNDQSSLHRQQAEKLYEILKPFLGDNCEQDDGQDQHATVNNQSPDTEM 167
           SMKS RQSDKINTNDQSSLHRQQAEKLYEILKPFLGD+CEQDDGQDQHATVNN+SPDTEM
Sbjct: 61  SMKSWRQSDKINTNDQSSLHRQQAEKLYEILKPFLGDDCEQDDGQDQHATVNNRSPDTEM 120

Query: 168 ELISPLCETSSILGSKVKSEETGVKSILLAGDTMPNGSVQKHKENDCIHDIEVKAKITTG 227
           ELISPLCETSSI GSKVK EETGVKSILLA D MPNGSV+KHKEND IHDIEVK +I TG
Sbjct: 121 ELISPLCETSSIPGSKVKREETGVKSILLAVDAMPNGSVRKHKENDSIHDIEVKPRIVTG 180

Query: 228 GFCLNSFVTEENSCLKTDDRKLVSKVKIEEAKEHLINNSSKSRRLKSASNVVGECNLLKG 287
           G  LNSFVTEENSCLK D+ K VSKVKIEEAKEHLINNS KSRRLKSASNVVGE NLLKG
Sbjct: 181 GVRLNSFVTEENSCLKPDNLKPVSKVKIEEAKEHLINNSFKSRRLKSASNVVGERNLLKG 240

Query: 288 QKQGKSVAEKANPDVPRQRDGLSGSKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIG 347
           QKQGKSVAEKANPDVPRQRDGLSG+KRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIG
Sbjct: 241 QKQGKSVAEKANPDVPRQRDGLSGNKRSFDPNIEEKLIDFLLRTKRNKSDAGPALPQSIG 300

Query: 348 IGASSCLSSNTIGMVDNYLKASETPKPGSFDSSNVLIMLLTKLQGQQGNVMVRTHTKETD 407
            GASSCLSSNT GMVDNYLK SETPKPGSFDSSNVL+MLLTKLQGQQGNVMVRT TKETD
Sbjct: 301 SGASSCLSSNTKGMVDNYLKVSETPKPGSFDSSNVLVMLLTKLQGQQGNVMVRTRTKETD 360

Query: 408 KLLPEDSNNVNVSREKSHLNMDHKRKAFTERRGESKLHTSISKEKKSR 456
           KLLPEDS NVNVSREKSHLNMDHK+KAFTE RGESKLHTSISKEK+ R
Sbjct: 361 KLLPEDSKNVNVSREKSHLNMDHKQKAFTEWRGESKLHTSISKEKRLR 408

The following BLAST results are available for this feature:

BLAST of Csa4G338980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY13_CUCSA	0.0e+00	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G338980 PE=4 SV=1	[more]
A5AZY9_VITVI	8.8e-32	27.24	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026888 PE=4 SV=1	[more]
A5AZY9_VITVI	6.1e-09	21.24	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026888 PE=4 SV=1	[more]
A0A061EX46_THECC	4.0e+00	38.57	Uncharacterized protein OS=Theobroma cacao GN=TCM_024613 PE=4 SV=1	[more]
A0A0D2QD14_GOSRA	5.3e-29	30.05	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G146100 PE=4 SV=1	[more]

BLAST of Csa4G338980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778694149\|ref\|XP_011653753.1\|	0.0e+00	100.00	PREDICTED: uncharacterized protein LOC105434402 isoform X1 [Cucumis sativus]	[more]
gi\|778694152\|ref\|XP_011653754.1\|	0.0e+00	95.99	PREDICTED: uncharacterized protein LOC105434402 isoform X2 [Cucumis sativus]	[more]
gi\|778694155\|ref\|XP_011653755.1\|	0.0e+00	100.00	PREDICTED: uncharacterized protein LOC105434402 isoform X3 [Cucumis sativus]	[more]
gi\|659129283\|ref\|XP_008464610.1\|	1.5e-237	91.87	PREDICTED: uncharacterized protein LOC103502451 isoform X1 [Cucumis melo]	[more]
gi\|659129289\|ref\|XP_008464613.1\|	3.5e-207	91.42	PREDICTED: uncharacterized protein LOC103502451 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011112	Rho_N
IPR011112	Rho_N
IPR011112	Rho_N

Vocabulary: **Biological Process**
Term	Definition
GO:0006353	DNA-templated transcription, termination
GO:0006353	DNA-templated transcription, termination
GO:0006353	DNA-templated transcription, termination

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU159876	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa4G338980.1	Csa4G338980.1	mRNA
Csa4G338980.2	Csa4G338980.2	mRNA
Csa4G338980.3	Csa4G338980.3	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU159876	CU159876	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011112	Rho termination factor, N-terminal	PFAM	PF07498	Rho_N	coord: 393..419 score: 1.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa4G338980	Cla006845	Watermelon (97103) v1	cuwmB342
Csa4G338980	ClCG04G003660	Watermelon (Charleston Gray)	cuwcgB297
Csa4G338980	Cla97C04G070660	Watermelon (97103) v2	cuwmbB294
Csa4G338980	Bhi03G001955	Wax gourd	cuwgoB393
Csa4G338980	CSPI04G17100	Wild cucumber (PI 183967)	cpicuB181
Csa4G338980	Cucsa.018010	Cucumber (Gy14) v1	cgycuB380
Csa4G338980	CmaCh07G013360	Cucurbita maxima (Rimu)	cmacuB863
Csa4G338980	CmoCh07G013790	Cucurbita moschata (Rifu)	cmocuB851
Csa4G338980	Cp4.1LG19g00480	Cucurbita pepo (Zucchini)	cpecuB501
Csa4G338980	CsGy4G016330	Cucumber (Gy14) v2	cgybcuB167
Csa4G338980	Carg21127	Silver-seed gourd	carcuB0507

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa4G338980	Cucurbita maxima (Rimu)	cmacuB873
Csa4G338980	Cucurbita moschata (Rifu)	cmocuB665
Csa4G338980	Cucurbita moschata (Rifu)	cmocuB860
Csa4G338980	Watermelon (97103) v1	cuwmB345
Csa4G338980	Cucurbita pepo (Zucchini)	cpecuB076
Csa4G338980	Cucurbita pepo (Zucchini)	cpecuB493
Csa4G338980	Silver-seed gourd	carcuB0506
Csa4G338980	Silver-seed gourd	carcuB0555
Csa4G338980	Cucurbita maxima (Rimu)	cmacuB675