Csa4G338960 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G338960
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRNA exonuclease; contains IPR012337 (Ribonuclease H-like domain)
LocationChr4 : 14007733 .. 14009096 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGTTTCATATCACTCTGTTCATCAGCCTAGATGTGGAGTCTGCCTAAAGCACTGCAAATCATTTGAATCATTGAGAGAACATCTAATGGGTGAGATAGTTTTGTGTATCTTTATGGTAATATATCATAACACCATCTCATTATTTCCAGTCTTTTAGGTCCACTTTCAAAATCAAATTGTTCAAAAATTTTCTCAGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGTCCGGAATCTCTCAGTGATCACCAAGACATTTGCTGCATAACAGCACCTGTTCACCAAGTAAGTCGCTCTCTATGCATCATATATCATATATGATAAATAATAAGGTTACTGGTAGTTCTCAAAAAAAGAAAAAGGTTTCGGGTAGTTTATATTTTTATATATCAAGTAATTGAGCCATTTATTATGATATCATACATGCATTTCAGAATTTGATTGGGGCTCTGTTTTAGGGAACAAGTCTACCACCAACTGATTTATCCGATTGTTACGAAGAAGATCGTTCTGATCGAGGCCTTGGAGCAATAGCTATTGATTGTGTAATGGCTGGTGGAGGAAGTGATGGTGCACTGGACATTTGTGTTTGGATATGCCTTGTTGATGAAGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAAATACCGATCACGAACTATAGGTACTTGTCTGTGGCATTATCTTGTTCTCTAAAGAAGGTTTTAGCTTTTAAAATCTAGCCTATAGATGCTCATTTCCCAGTCATGTTGTAGGCATGAAGTAACTGGGCTAAAGGAAGAACATATGAGGTATGCCATGCCACTGAAAAATGTCCAGGAAAAAGTATTGAAACTCTTGTTAAATGGAGAATCCATTGGGAGATTGAGATTGAATGGTGGTAAAGCTAAGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCCTGAGATTGAATTATCCCGATCATATGTTGAGGTGATTTTTACTAACTTGGTTTGTAATTTTGTGAGGTTTAGTTCACTTTTATTGAAAGTAAAATCCATTTGAACTTTGAAGTGATCTACTGAATATCGATGCACCAAAAAAAGAAAGAAAAACACTATCAACTACTACTTTTCAACCTTGCACATTATTTTCTCTGGAAATAATTCCCACCATTGAGAGAAGCCAACGTATTTTTGCTCTTTTTTCTTTAATCATTTTTCCTTTTTGTTTCGTTTTTTTATTGTTAAATGCACATTATTCATACACCTTTTGCCTGATATTTTTTTGCAGGGACACGGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGTCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTAA

mRNA sequence

ATGAGAGTTTCATATCACTCTGTTCATCAGCCTAGATGTGGAGTCTGCCTAAAGCACTGCAAATCATTTGAATCATTGAGAGAACATCTAATGGGTCCACTTTCAAAATCAAATTGTTCAAAAATTTTCTCAGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGTCCGGAATCTCTCAGTGATCACCAAGACATTTGCTGCATAACAGCACCTGTTCACCAAGGAACAAGTCTACCACCAACTGATTTATCCGATTGTTACGAAGAAGATCGTTCTGATCGAGGCCTTGGAGCAATAGCTATTGATTGTGTAATGGCTGGTGGAGGAAGTGATGGTGCACTGGACATTTGTGTTTGGATATGCCTTGTTGATGAAGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAAATACCGATCACGAACTATAGGCATGAAGTAACTGGGCTAAAGGAAGAACATATGAGGTATGCCATGCCACTGAAAAATGTCCAGGAAAAAGTATTGAAACTCTTGTTAAATGGAGAATCCATTGGGAGATTGAGATTGAATGGTGGTAAAGCTAAGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCCTGAGATTGAATTATCCCGATCATATGTTGAGGGACACGGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGTCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTAA

Coding sequence (CDS)

ATGAGAGTTTCATATCACTCTGTTCATCAGCCTAGATGTGGAGTCTGCCTAAAGCACTGCAAATCATTTGAATCATTGAGAGAACATCTAATGGGTCCACTTTCAAAATCAAATTGTTCAAAAATTTTCTCAGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGTCCGGAATCTCTCAGTGATCACCAAGACATTTGCTGCATAACAGCACCTGTTCACCAAGGAACAAGTCTACCACCAACTGATTTATCCGATTGTTACGAAGAAGATCGTTCTGATCGAGGCCTTGGAGCAATAGCTATTGATTGTGTAATGGCTGGTGGAGGAAGTGATGGTGCACTGGACATTTGTGTTTGGATATGCCTTGTTGATGAAGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAAATACCGATCACGAACTATAGGCATGAAGTAACTGGGCTAAAGGAAGAACATATGAGGTATGCCATGCCACTGAAAAATGTCCAGGAAAAAGTATTGAAACTCTTGTTAAATGGAGAATCCATTGGGAGATTGAGATTGAATGGTGGTAAAGCTAAGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCCTGAGATTGAATTATCCCGATCATATGTTGAGGGACACGGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGTCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTAA

Protein sequence

MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLG*
Homology
[Close]
BLAST of Csa4G338960 vs. Swiss-Prot
Match: REXO4_GIBZE (RNA exonuclease 4 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=REX4 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.0e-15
Identity = 50/144 (34.72%), Postives = 78/144 (54.17%), Query Frame = 1 

Query: 101 IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRY 160
           IAIDC M G G  G       + +VD     I++++V+P+  +TN+R  V+G+ ++ MR+
Sbjct: 134 IAIDCEMVGVGPGGHESALARVSIVDFHGVQIYDSYVKPKEKVTNWRTAVSGISQKSMRF 193

Query: 161 AMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTAR 220
           A   + VQ ++ KLL              + ++LVGHDL+HDL+ L L++P   +RDTA+
Sbjct: 194 ARDFEEVQAEIDKLL--------------RGRILVGHDLKHDLEALILSHPGKDIRDTAK 253

Query: 221 YHPLMK-TNLVSHSLKYLTRAYLG 244
           +    K  N    SL+ L +  LG
Sbjct: 254 FSGFKKYANGRKPSLRVLAQQLLG 263

[Close]
BLAST of Csa4G338960 vs. Swiss-Prot
Match: REXO4_YEAST (RNA exonuclease 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REX4 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.7e-14
Identity = 49/144 (34.03%), Postives = 75/144 (52.08%), Query Frame = 1 

Query: 101 IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRY 160
           IA+DC   G G +G       I +V+    ++ + FV+P+  +  +R  V+G+K EHM+ 
Sbjct: 122 IAMDCEFVGVGPEGKESALARISIVNYFGHVVLDEFVKPREKVVEWRTWVSGIKPEHMKN 181

Query: 161 AMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTAR 220
           A+  K  Q+K   +L              + ++LVGH L+HDL+ L L++P  +LRDT+R
Sbjct: 182 AITFKEAQKKTADIL--------------EGRILVGHALKHDLEALMLSHPKSLLRDTSR 241

Query: 221 YHPLMK--TNLVSHSLKYLTRAYL 243
           + P  K      + SLK LTR  L
Sbjct: 242 HLPFRKLYAKGKTPSLKKLTREVL 251

[Close]
BLAST of Csa4G338960 vs. Swiss-Prot
Match: REXO4_NEUCR (RNA exonuclease 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rex-4 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.2e-14
Identity = 51/162 (31.48%), Postives = 81/162 (50.00%), Query Frame = 1 

Query: 83  TDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIP 142
           TDL+   +  +S+     ++IDC M G G  GA  +     +VD     I++++V+P   
Sbjct: 199 TDLALILQATKSNTLGKYLSIDCEMVGTGPSGATSVLARCSIVDFHGHQIYDSYVRPTAF 258

Query: 143 ITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHD 202
           +T++R  V+G+ + HM  A   ++VQ  V  LL              K ++LVGHD++HD
Sbjct: 259 VTDWRTHVSGISKRHMASARSFESVQATVAALL--------------KGRILVGHDVKHD 318

Query: 203 LDCLRLNYPDHMLRDTARYHPLMK-TNLVSHSLKYLTRAYLG 244
           L+ L   +P   +RDTA+Y    K  +    SL+ L +  LG
Sbjct: 319 LEVLGFEHPHRDIRDTAKYSGFRKYGHGPKPSLRVLAKEVLG 346

[Close]
BLAST of Csa4G338960 vs. Swiss-Prot
Match: REXO4_HUMAN (RNA exonuclease 4 OS=Homo sapiens GN=REXO4 PE=1 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 2.8e-14
Identity = 47/146 (32.19%), Postives = 81/146 (55.48%), Query Frame = 1 

Query: 100 AIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMR 159
           A+A+DC M G G  G   +   + +V++  K +++ +V+P  P+T+YR  V+G++ E+++
Sbjct: 243 ALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLK 302

Query: 160 YAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTA 219
               L+ VQ++V ++L              K ++LVGH L +DL  L L++P   +RDT 
Sbjct: 303 QGEELEVVQKEVAEML--------------KGRILVGHALHNDLKVLFLDHPKKKIRDTQ 362

Query: 220 RYHPLMKTNLVS--HSLKYLTRAYLG 244
           +Y P  K+ + S   SL+ L+   LG
Sbjct: 363 KYKP-FKSQVKSGRPSLRLLSEKILG 373

[Close]
BLAST of Csa4G338960 vs. Swiss-Prot
Match: REXO4_USTMA (RNA exonuclease 4 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=REX4 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 8.2e-14
Identity = 52/163 (31.90%), Postives = 82/163 (50.31%), Query Frame = 1 

Query: 82  PTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQI 141
           P+D S   +E  +      +AIDC M G G  G+  I   + +V+     I++ FV+PQ 
Sbjct: 122 PSDASSAKKEPGN-----YLAIDCEMVGVGDKGSESILARVSIVNFHGATIYDQFVRPQE 181

Query: 142 PITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEH 201
            +T+YR  V+G++ + ++ A     VQ +V  L+              K K+LVGH +++
Sbjct: 182 KVTDYRTWVSGVRPKDLKGAPSFSQVQGEVANLI--------------KGKVLVGHAIQN 241

Query: 202 DLDCLRLNYPDHMLRDTARYHPLMKTNLVSH-SLKYLTRAYLG 244
           DL  L L++P  ++RDTA + PL       + SLK L +  LG
Sbjct: 242 DLKALLLSHPKVLIRDTATFQPLRDLAKTKYPSLKKLAKLVLG 265

[Close]
BLAST of Csa4G338960 vs. TrEMBL
Match: A0A0A0KYE9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G338960 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 1.2e-141
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES
Sbjct: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV
Sbjct: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES
Sbjct: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240
           IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240

Query: 241 YLG 244
           YLG
Sbjct: 241 YLG 243

[Close]
BLAST of Csa4G338960 vs. TrEMBL
Match: A0A0R0FUQ9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G023300 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.0e-95
Identity = 169/249 (67.87%), Postives = 204/249 (81.93%), Query Frame = 1 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           M+ SYHSVHQPRCGVC KHCKSFESLREHL GPL +  CSKIFS+QGC LCL + D P S
Sbjct: 1   MKTSYHSVHQPRCGVCQKHCKSFESLREHLTGPLPRGICSKIFSQQGCQLCLALFDSPGS 60

Query: 61  LSDHQDICCITAPVHQGTSLPPT-----DLSDCYEEDRSDRGLG-AIAIDCVMAGGGSDG 120
           L DH+ IC I+AP   GTS  P      D  D  +E+ +  G G A+A+DC M GGGSDG
Sbjct: 61  LIDHRKICRISAPTCPGTSALPYIDSQFDCQDFSDENHAGEGPGGAVAMDCEMVGGGSDG 120

Query: 121 ALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKL 180
           +L++C  +CLVDEDE+LIF+T+VQP+IP+TNYR+++TGL EEH+R AMPLK V+EK+L++
Sbjct: 121 SLELCARVCLVDEDERLIFHTYVQPEIPVTNYRYDITGLTEEHLRNAMPLKEVREKLLQI 180

Query: 181 LLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSL 240
           L NGESIG++RL+GGKA+LLVGHDL HDLDCL++NYPDHMLRDTA+Y PLMKTNLVSHSL
Sbjct: 181 LHNGESIGKVRLDGGKARLLVGHDLAHDLDCLKMNYPDHMLRDTAKYRPLMKTNLVSHSL 240

Query: 241 KYLTRAYLG 244
           KYLTR YLG
Sbjct: 241 KYLTRTYLG 249

[Close]
BLAST of Csa4G338960 vs. TrEMBL
Match: I1MCY4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G023300 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.0e-95
Identity = 169/249 (67.87%), Postives = 204/249 (81.93%), Query Frame = 1 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           M+ SYHSVHQPRCGVC KHCKSFESLREHL GPL +  CSKIFS+QGC LCL + D P S
Sbjct: 34  MKTSYHSVHQPRCGVCQKHCKSFESLREHLTGPLPRGICSKIFSQQGCQLCLALFDSPGS 93

Query: 61  LSDHQDICCITAPVHQGTSLPPT-----DLSDCYEEDRSDRGLG-AIAIDCVMAGGGSDG 120
           L DH+ IC I+AP   GTS  P      D  D  +E+ +  G G A+A+DC M GGGSDG
Sbjct: 94  LIDHRKICRISAPTCPGTSALPYIDSQFDCQDFSDENHAGEGPGGAVAMDCEMVGGGSDG 153

Query: 121 ALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKL 180
           +L++C  +CLVDEDE+LIF+T+VQP+IP+TNYR+++TGL EEH+R AMPLK V+EK+L++
Sbjct: 154 SLELCARVCLVDEDERLIFHTYVQPEIPVTNYRYDITGLTEEHLRNAMPLKEVREKLLQI 213

Query: 181 LLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSL 240
           L NGESIG++RL+GGKA+LLVGHDL HDLDCL++NYPDHMLRDTA+Y PLMKTNLVSHSL
Sbjct: 214 LHNGESIGKVRLDGGKARLLVGHDLAHDLDCLKMNYPDHMLRDTAKYRPLMKTNLVSHSL 273

Query: 241 KYLTRAYLG 244
           KYLTR YLG
Sbjct: 274 KYLTRTYLG 282

[Close]
BLAST of Csa4G338960 vs. TrEMBL
Match: A0A0B2RL39_GLYSO (RNA exonuclease 4 OS=Glycine soja GN=glysoja_022365 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.3e-95
Identity = 168/249 (67.47%), Postives = 204/249 (81.93%), Query Frame = 1 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           M+ SYHSVHQPRCGVC KHCKSFESLREHL GPL +  CSKIFS+QGC LCL + D P S
Sbjct: 34  MKTSYHSVHQPRCGVCQKHCKSFESLREHLTGPLPRGICSKIFSQQGCQLCLALFDSPGS 93

Query: 61  LSDHQDICCITAPVHQGTSLPPT-----DLSDCYEEDRSDRGLG-AIAIDCVMAGGGSDG 120
           L DH+ IC I+AP   GTS  P      D  D  +E+ +  G G A+A+DC M GGGSDG
Sbjct: 94  LIDHRKICRISAPTCPGTSALPYIDSQFDCQDSSDENHAGEGPGGAVAMDCEMVGGGSDG 153

Query: 121 ALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKL 180
           +L++C  +CLVDEDE+LIF+T+VQP+IP+TNYR+++TGL EEH+R AMPLK V+EK+L++
Sbjct: 154 SLELCARVCLVDEDERLIFHTYVQPEIPVTNYRYDITGLTEEHLRNAMPLKEVREKLLQI 213

Query: 181 LLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSL 240
           L NGESIG++RL+GGKA+LLVGHDL HD+DCL++NYPDHMLRDTA+Y PLMKTNLVSHSL
Sbjct: 214 LHNGESIGKVRLDGGKARLLVGHDLAHDMDCLKMNYPDHMLRDTAKYRPLMKTNLVSHSL 273

Query: 241 KYLTRAYLG 244
           KYLTR YLG
Sbjct: 274 KYLTRTYLG 282

[Close]
BLAST of Csa4G338960 vs. TrEMBL
Match: C6THA2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G351300 PE=2 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 3.3e-94
Identity = 165/249 (66.27%), Postives = 203/249 (81.53%), Query Frame = 1 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           M+ SYHSVHQPRCGVC KHCKSFESLREHL GPL +  CSKIFS+QGC LCL + D P S
Sbjct: 34  MKTSYHSVHQPRCGVCQKHCKSFESLREHLTGPLPRGICSKIFSQQGCQLCLALFDSPGS 93

Query: 61  LSDHQDICCITAPVHQGTSLPPT-----DLSDCYEEDRSDRGLG-AIAIDCVMAGGGSDG 120
           L  H++ C ++AP   GTS  P      D  D  +E+ +  G G A+AIDC M GGGSDG
Sbjct: 94  LIGHRETCRLSAPTCPGTSALPYIDSQFDCQDSSDENHAGEGPGGAVAIDCEMVGGGSDG 153

Query: 121 ALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKL 180
           +L++C  +CLVDEDE+LIF+T+VQP+IP+TNYR+++TGL EEH++ A+PLK V+EK+L++
Sbjct: 154 SLELCARVCLVDEDERLIFHTYVQPEIPVTNYRYDITGLTEEHLKNAIPLKKVREKLLQI 213

Query: 181 LLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSL 240
           L NGESIG++RL+GGKA+LLVGHDL HDLDCL++NYPDHMLRDTA+Y PLMKTNLVSHSL
Sbjct: 214 LQNGESIGKVRLDGGKARLLVGHDLAHDLDCLKMNYPDHMLRDTAKYRPLMKTNLVSHSL 273

Query: 241 KYLTRAYLG 244
           KYLTR YLG
Sbjct: 274 KYLTRTYLG 282

[Close]
BLAST of Csa4G338960 vs. TAIR10
Match: AT2G48100.1 (AT2G48100.1 Exonuclease family protein)

HSP 1 Score: 272.7 bits (696), Expect = 2.2e-73
Identity = 132/245 (53.88%), Postives = 175/245 (71.43%), Query Frame = 1 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGP--LSKSNCSKIFSEQGCGLCLRVLDGP 60
           M++SYHS+HQPRCGVCLKHCKSFES+REHL  P  LSK NC  IF+++GC LCL++ +  
Sbjct: 36  MKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCKAIFTKRGCTLCLQIFEEA 95

Query: 61  ESLSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDI 120
            +L++H++ C ++ P   GTS      S       +   L A+A+DC M GGG+DG +D 
Sbjct: 96  FALAEHKNKCHLSPPRPLGTSTQRNPSSSL-----AGSRLKAMALDCEMVGGGADGTIDQ 155

Query: 121 CVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNG 180
           C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGL +E ++  MPL++V+E+V   L  G
Sbjct: 156 CASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTKEDLKDGMPLEHVRERVFSFLCGG 215

Query: 181 ESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLT 240
           ++ G  RL      LLVGHDL HD+ CL+L YP H+LRDTA+Y PLMKTNLVS SLKYLT
Sbjct: 216 QNDGAGRL------LLVGHDLRHDMSCLKLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLT 269

Query: 241 RAYLG 244
           ++YLG
Sbjct: 276 KSYLG 269

[Close]
BLAST of Csa4G338960 vs. TAIR10
Match: AT3G27970.1 (AT3G27970.1 Exonuclease family protein)

HSP 1 Score: 268.9 bits (686), Expect = 3.2e-72
Identity = 128/246 (52.03%), Postives = 174/246 (70.73%), Query Frame = 1 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           M++SYHS H+P CGVC KHC+SFESLREHL+GPL K  C  IFS +GC  C+ +L+ P S
Sbjct: 34  MKISYHSGHEPTCGVCKKHCRSFESLREHLIGPLPKQECKNIFSLRGCRFCMTILESPNS 93

Query: 61  LSDHQDICCITAPVHQG--TSLPPTDLSDCYEED-RSDRGLGAIAIDCVMAGGGSDGALD 120
              HQ+ C  ++ V+ G  T +    L D    D  S R    +A+ C M GGGSDG+LD
Sbjct: 94  RRIHQERCQFSS-VNSGLTTRMAALGLRDKAMIDYTSSRSPRVVALSCKMVGGGSDGSLD 153

Query: 121 ICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLN 180
           +C  +C+ DE + +IF+T+V+P + +T+YR+E TG++ E++R AMPLK VQ K+ + L N
Sbjct: 154 LCARVCITDESDNVIFHTYVKPSMAVTSYRYETTGIRPENLRDAMPLKQVQRKIQEFLCN 213

Query: 181 GESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYL 240
           GE + ++R  GGKA++LVGH L+HDLD L+L YP  M+RDTA+Y PLMKT+ +S+SLKYL
Sbjct: 214 GEPMWKIRPRGGKARILVGHGLDHDLDRLQLEYPSSMIRDTAKYPPLMKTSKLSNSLKYL 273

Query: 241 TRAYLG 244
           T+AYLG
Sbjct: 274 TQAYLG 278

[Close]
BLAST of Csa4G338960 vs. TAIR10
Match: AT5G40310.1 (AT5G40310.1 Exonuclease family protein)

HSP 1 Score: 258.1 bits (658), Expect = 5.6e-69
Identity = 122/246 (49.59%), Postives = 171/246 (69.51%), Query Frame = 1 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           MR+SYHSVH+P CG+C KHC+SF+SLREHL+GPL K  C  IFS +GC  CL +L+ P +
Sbjct: 25  MRISYHSVHEPTCGICNKHCRSFDSLREHLIGPLPKQECKNIFSIRGCRFCLTILESPNA 84

Query: 61  LSDHQDICCITAPVHQGTSLPPTDL---SDCYEEDRSDRGLGAIAIDCVMAGGGSDGALD 120
              HQ+ C ++  V  G  +    L   ++   +  S R    +A+ C M GGGSDG+LD
Sbjct: 85  RRIHQERCQLSN-VTSGLMIRMAALGLRNNSTIDYTSSRSPRVVALSCKMVGGGSDGSLD 144

Query: 121 ICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLN 180
           +C  +C+ DE E ++F+T+V+P IP+TNYR+E+TG++ E++R AM LK+ Q KV + L N
Sbjct: 145 LCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIRPENLRDAMRLKHAQRKVQEFLCN 204

Query: 181 GESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYL 240
           GE + ++R   GKA++LVGH L++ LD L+L Y   M+RDTA Y PLMK++ +S+SLKYL
Sbjct: 205 GEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSMIRDTAEYPPLMKSSKLSNSLKYL 264

Query: 241 TRAYLG 244
           T+AYLG
Sbjct: 265 TQAYLG 269

[Close]
BLAST of Csa4G338960 vs. TAIR10
Match: AT3G50100.1 (AT3G50100.1 small RNA degrading nuclease 1)

HSP 1 Score: 58.9 bits (141), Expect = 5.0e-09
Identity = 45/147 (30.61%), Postives = 74/147 (50.34%), Query Frame = 1 

Query: 101 IAIDC--VMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHM 160
           +A+DC  V+   G++G + + V    VD D K+I + FV+P  P+ +YR ++TG+  E +
Sbjct: 141 VAVDCEMVLCEDGTEGLVRVGV----VDRDLKVILDEFVKPNKPVVDYRTDITGITAEDI 200

Query: 161 RYA-MPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRD 220
             A + + ++QE +   L  G              +LVGH L  DL+ L++++P   + D
Sbjct: 201 ENASLSVVDIQETLQPFLSTG-------------TILVGHSLNRDLEVLKIDHP--KVID 260

Query: 221 TARYHPLMKT-NLVSHSLKYLTRAYLG 244
           TA       T  L   SL  L ++ LG
Sbjct: 261 TALVFKYPNTRKLRRPSLNNLCKSILG 268

[Close]
BLAST of Csa4G338960 vs. TAIR10
Match: AT5G05540.1 (AT5G05540.1 small RNA degrading nuclease 2)

HSP 1 Score: 53.9 bits (128), Expect = 1.6e-07
Identity = 46/150 (30.67%), Postives = 70/150 (46.67%), Query Frame = 1 

Query: 101 IAIDC--VMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHM 160
           IAIDC  V+   GS+      V +  VD D K+I + FV+P  P+ +YR  +TGL  + +
Sbjct: 143 IAIDCEMVLCEDGSEAV----VRVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLTAQDL 202

Query: 161 RYA-MPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYP---DHM 220
             A + + ++QEK+L  +              +  +LVG  L HDL  L++++    D  
Sbjct: 203 EKATISVVDIQEKLLMFI-------------SEDTILVGQSLNHDLKVLKVDHARVIDTS 262

Query: 221 LRDTARYHPLMK-TNLVSHSLKYLTRAYLG 244
           L     Y    +   L   SL YL +  LG
Sbjct: 263 LVFKYNYDGTRRPLRLKRPSLNYLCKCILG 275

[Close]
BLAST of Csa4G338960 vs. NCBI nr
Match: gi|778694140|ref|XP_011653750.1| (PREDICTED: apoptosis-enhancing nuclease isoform X1 [Cucumis sativus])

HSP 1 Score: 510.4 bits (1313), Expect = 1.8e-141
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES
Sbjct: 34  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 93

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV
Sbjct: 94  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 153

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES
Sbjct: 154 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 213

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240
           IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 214 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 273

Query: 241 YLG 244
           YLG
Sbjct: 274 YLG 276

[Close]
BLAST of Csa4G338960 vs. NCBI nr
Match: gi|700199335|gb|KGN54493.1| (hypothetical protein Csa_4G338960 [Cucumis sativus])

HSP 1 Score: 510.4 bits (1313), Expect = 1.8e-141
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES
Sbjct: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV
Sbjct: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES
Sbjct: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240
           IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240

Query: 241 YLG 244
           YLG
Sbjct: 241 YLG 243

[Close]
BLAST of Csa4G338960 vs. NCBI nr
Match: gi|659111761|ref|XP_008455895.1| (PREDICTED: uncharacterized protein LOC103495972 isoform X1 [Cucumis melo])

HSP 1 Score: 476.1 bits (1224), Expect = 3.7e-131
Identity = 226/243 (93.00%), Postives = 237/243 (97.53%), Query Frame = 1 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLRE+LMGPLSKS+CSKIFSEQGCGLCLRVLD P++
Sbjct: 34  MRVSYHSVHQPRCGVCLKHCKSFESLREYLMGPLSKSSCSKIFSEQGCGLCLRVLDSPKT 93

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LS+H +ICCITAPVHQGTSL PTDLSDCYEEDRSDRGLGAIA+DCVMAGGGSDGALDICV
Sbjct: 94  LSEHLNICCITAPVHQGTSLLPTDLSDCYEEDRSDRGLGAIAMDCVMAGGGSDGALDICV 153

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDE EKLIFNTFVQPQIPITNYRHEVTGLKEEH+RYAMPL+NVQEKVLKLLLNGES
Sbjct: 154 WICLVDEHEKLIFNTFVQPQIPITNYRHEVTGLKEEHLRYAMPLRNVQEKVLKLLLNGES 213

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240
           IGRLR NGGKAKLLVGHDLEHDLD LR+NYPDHMLRDTARYHPL+KTNLVSHSLKYLTRA
Sbjct: 214 IGRLRSNGGKAKLLVGHDLEHDLDYLRMNYPDHMLRDTARYHPLIKTNLVSHSLKYLTRA 273

Query: 241 YLG 244
           YLG
Sbjct: 274 YLG 276

[Close]
BLAST of Csa4G338960 vs. NCBI nr
Match: gi|449449811|ref|XP_004142658.1| (PREDICTED: apoptosis-enhancing nuclease isoform X2 [Cucumis sativus])

HSP 1 Score: 474.9 bits (1221), Expect = 8.2e-131
Identity = 230/243 (94.65%), Postives = 230/243 (94.65%), Query Frame = 1 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLM             EQGCGLCLRVLDGPES
Sbjct: 34  MRVSYHSVHQPRCGVCLKHCKSFESLREHLM-------------EQGCGLCLRVLDGPES 93

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV
Sbjct: 94  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 153

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES
Sbjct: 154 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 213

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240
           IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 214 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 263

Query: 241 YLG 244
           YLG
Sbjct: 274 YLG 263

[Close]
BLAST of Csa4G338960 vs. NCBI nr
Match: gi|659111763|ref|XP_008455896.1| (PREDICTED: uncharacterized protein LOC103495972 isoform X2 [Cucumis melo])

HSP 1 Score: 450.3 bits (1157), Expect = 2.2e-123
Identity = 213/230 (92.61%), Postives = 224/230 (97.39%), Query Frame = 1 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLRE+LMGPLSKS+CSKIFSEQGCGLCLRVLD P++
Sbjct: 34  MRVSYHSVHQPRCGVCLKHCKSFESLREYLMGPLSKSSCSKIFSEQGCGLCLRVLDSPKT 93

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LS+H +ICCITAPVHQGTSL PTDLSDCYEEDRSDRGLGAIA+DCVMAGGGSDGALDICV
Sbjct: 94  LSEHLNICCITAPVHQGTSLLPTDLSDCYEEDRSDRGLGAIAMDCVMAGGGSDGALDICV 153

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDE EKLIFNTFVQPQIPITNYRHEVTGLKEEH+RYAMPL+NVQEKVLKLLLNGES
Sbjct: 154 WICLVDEHEKLIFNTFVQPQIPITNYRHEVTGLKEEHLRYAMPLRNVQEKVLKLLLNGES 213

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLV 231
           IGRLR NGGKAKLLVGHDLEHDLD LR+NYPDHMLRDTARYHPL+KTNLV
Sbjct: 214 IGRLRSNGGKAKLLVGHDLEHDLDYLRMNYPDHMLRDTARYHPLIKTNLV 263

The following BLAST results are available for this feature:
BLAST of Csa4G338960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
REXO4_GIBZE2.0e-1534.72RNA exonuclease 4 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / ... [more]
REXO4_YEAST1.7e-1434.03RNA exonuclease 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RE... [more]
REXO4_NEUCR2.2e-1431.48RNA exonuclease 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708... [more]
REXO4_HUMAN2.8e-1432.19RNA exonuclease 4 OS=Homo sapiens GN=REXO4 PE=1 SV=2[more]
REXO4_USTMA8.2e-1431.90RNA exonuclease 4 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=REX4 PE=3 SV=1[more]
BLAST of Csa4G338960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYE9_CUCSA1.2e-141100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G338960 PE=4 SV=1[more]
A0A0R0FUQ9_SOYBN1.0e-9567.87Uncharacterized protein OS=Glycine max GN=GLYMA_15G023300 PE=4 SV=1[more]
I1MCY4_SOYBN1.0e-9567.87Uncharacterized protein OS=Glycine max GN=GLYMA_15G023300 PE=4 SV=1[more]
A0A0B2RL39_GLYSO1.3e-9567.47RNA exonuclease 4 OS=Glycine soja GN=glysoja_022365 PE=4 SV=1[more]
C6THA2_SOYBN3.3e-9466.27Uncharacterized protein OS=Glycine max GN=GLYMA_13G351300 PE=2 SV=1[more]
BLAST of Csa4G338960 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G48100.12.2e-7353.88 Exonuclease family protein[more]
AT3G27970.13.2e-7252.03 Exonuclease family protein[more]
AT5G40310.15.6e-6949.59 Exonuclease family protein[more]
AT3G50100.15.0e-0930.61 small RNA degrading nuclease 1[more]
AT5G05540.11.6e-0730.67 small RNA degrading nuclease 2[more]
BLAST of Csa4G338960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778694140|ref|XP_011653750.1|1.8e-141100.00PREDICTED: apoptosis-enhancing nuclease isoform X1 [Cucumis sativus][more]
gi|700199335|gb|KGN54493.1|1.8e-141100.00hypothetical protein Csa_4G338960 [Cucumis sativus][more]
gi|659111761|ref|XP_008455895.1|3.7e-13193.00PREDICTED: uncharacterized protein LOC103495972 isoform X1 [Cucumis melo][more]
gi|449449811|ref|XP_004142658.1|8.2e-13194.65PREDICTED: apoptosis-enhancing nuclease isoform X2 [Cucumis sativus][more]
gi|659111763|ref|XP_008455896.1|2.2e-12392.61PREDICTED: uncharacterized protein LOC103495972 isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR013520Exonuclease_RNaseT/DNA_pol3
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006364 rRNA processing
cellular_component GO:0005575 cellular_component
molecular_function GO:0004527 exonuclease activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008408 3'-5' exonuclease activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU122046cucumber EST collection version 3.0transcribed_cluster
CU168789cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G338960.1Csa4G338960.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU168789CU168789transcribed_cluster
CU122046CU122046transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 100..243
score: 1.7
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 101..242
score: 2.39
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 99..243
score: 8.
NoneNo IPR availablePANTHERPTHR12801EXONUCLEASEcoord: 1..243
score: 1.3E
NoneNo IPR availablePANTHERPTHR12801:SF66EXONUCLEASE-LIKE PROTEINcoord: 1..243
score: 1.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa4G338960CSPI04G17080Wild cucumber (PI 183967)cpicuB181
Csa4G338960Cucsa.017980Cucumber (Gy14) v1cgycuB380
Csa4G338960CsGy4G016310Cucumber (Gy14) v2cgybcuB167
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G338960Cucurbita pepo (Zucchini)cpecuB076
Csa4G338960Cucurbita pepo (Zucchini)cpecuB493
Csa4G338960Silver-seed gourdcarcuB0506
Csa4G338960Silver-seed gourdcarcuB0555
Csa4G338960Cucurbita maxima (Rimu)cmacuB675
Csa4G338960Cucurbita maxima (Rimu)cmacuB873
Csa4G338960Cucurbita moschata (Rifu)cmocuB665
Csa4G338960Cucurbita moschata (Rifu)cmocuB860
Csa4G338960Watermelon (97103) v1cuwmB345