Csa4G287540 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G287540
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionLipoxygenase; contains IPR013819 (Lipoxygenase, C-terminal)
LocationChr4 : 11161494 .. 11162284 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATTAGTGACAGTATATGTTTTGGTAGGGGGATGGCGGAAAGAAAGAAAGGTGACTACGGTCGTGATGTTCTTGAGTTGGCCATTAAAGACTACCCTTTTGCAAATGATGGTCTCCTGTTATGGAATGCTCTGTTGGAATGGGTGACAGAATATGTGAACCACTATTATGGAGATGATGAGAATGCAGTAATTAATGATAAAGAGCTGCAAGCTTGGTGGAATGAAATCCAAGAAAAAGGGCACCCAGATAAAAAGGAAGGATGGCCTACATTAAAAACCCGAAACGATCTCATTAAGATTGCATCAACCATTGCATGGGTAGGAAGTGGGCATCATGCATCTGTCAACTTCATTCAATATGCATATGCAGGCTATACTCCCAACCGACCGAGTATTGCAAGGACCAACATCCTCACAGAGGACTATCACCAACTTCCAGAAGAATTTATTGACCTACCTGAAAATGAGCTACTTCAAGTTTTTCCTTCAGTTGATCAGGCTTCTGTAGTGACAACAACTATGATTTTGTTGTCAGCACATTCTCCAGATGAGGAGTATATTGGGGATGAGATAGAGCCAGCCTGGGCTCTTGAGCCCTCCATAAGTAAGGCCTTCAAAAGGTTTCAAGCCAGCTTGAAGGATCTAGAGCAACAAATTGATGAAAATAATAAAAACAATAAGTTGAAGAATAGGCATGGAGCTGGTGTTGTGCCTTATGATGTTCTTAAACCAACTTCAACTTATGGAATTACTGGAAGGGGAGTTCCATACAGCGTTTCCACCTAA

mRNA sequence

ATGAAATTAGTGACAGTATATGTTTTGGTAGGGGGATGGCGGAAAGAAAGAAAGCCCTCCATAAGTAAGGCCTTCAAAAGGTTTCAAGCCAGCTTGAAGGATCTAGAGCAACAAATTGATGAAAATAATAAAAACAATAAGTTGAAGAATAGGCATGGAGCTGGTGTTGTGCCTTATGATGTTCTTAAACCAACTTCAACTTATGGAATTACTGGAAGGGGAGTTCCATACAGCGTTTCCACCTAA

Coding sequence (CDS)

ATGAAATTAGTGACAGTATATGTTTTGGTAGGGGGATGGCGGAAAGAAAGAAAGCCCTCCATAAGTAAGGCCTTCAAAAGGTTTCAAGCCAGCTTGAAGGATCTAGAGCAACAAATTGATGAAAATAATAAAAACAATAAGTTGAAGAATAGGCATGGAGCTGGTGTTGTGCCTTATGATGTTCTTAAACCAACTTCAACTTATGGAATTACTGGAAGGGGAGTTCCATACAGCGTTTCCACCTAA

Protein sequence

MKLVTVYVLVGGWRKERKPSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITGRGVPYSVST*
Homology
[Close]
BLAST of Csa4G287540 vs. Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.8e-14
Identity = 40/68 (58.82%), Postives = 47/68 (69.12%), Query Frame = 1 

Query: 13  WRKERKPSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITG 72
           W  E  P I+ AF+RF+  L+ LE  IDE N N  LKNR GAGVV Y++LKPTS +G+TG
Sbjct: 830 WANE--PVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEHGVTG 889

Query: 73  RGVPYSVS 81
            GVPYS+S
Sbjct: 890 MGVPYSIS 895

[Close]
BLAST of Csa4G287540 vs. Swiss-Prot
Match: LOX21_SOLTU (Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.3e-13
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 1 

Query: 19  PSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITGRGVPYS 78
           P I+ AF+ F   LK+LE  ID  N ++KL NR+GAGV+PY++LKP S  G+TG+GVPYS
Sbjct: 837 PVINAAFEVFSGKLKELEGIIDARNNDSKLSNRNGAGVMPYELLKPYSEPGVTGKGVPYS 896

Query: 79  VS 81
           +S
Sbjct: 897 IS 898

[Close]
BLAST of Csa4G287540 vs. Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 7.5e-12
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 1 

Query: 18  KPSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITGRGVPY 77
           +P +  AF++F   LK+ E  ID  N N + KNR GAG+VPY++LKP S  G+TGRG+P 
Sbjct: 833 EPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEPGVTGRGIPN 892

Query: 78  SVS 81
           S+S
Sbjct: 893 SIS 895

[Close]
BLAST of Csa4G287540 vs. Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, chloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 9.8e-12
Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = 1 

Query: 21  ISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITGRGVPYSVS 80
           + K F +F   L  +E+ I+E NK+ KLKNR GAG+ PY++L PTS +G+TGRG+P S+S
Sbjct: 857 VVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGRGIPNSIS 916

[Close]
BLAST of Csa4G287540 vs. Swiss-Prot
Match: LOX31_SOLTU (Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum GN=LOX3.1 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.3e-11
Identity = 34/60 (56.67%), Postives = 44/60 (73.33%), Query Frame = 1 

Query: 21  ISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITGRGVPYSVS 80
           I +AF +F A +  +E++IDE N N KLKNR GAGV+PY++L P+S  G+T RGVP SVS
Sbjct: 854 IVEAFYKFSAEIGRIEKEIDERNANTKLKNRCGAGVLPYELLAPSSGPGVTCRGVPNSVS 913

[Close]
BLAST of Csa4G287540 vs. TrEMBL
Match: A0A0A0L0K8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287540 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.5e-38
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1 

Query: 1  MKLVTVYVLVGGWRKERKPSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYD 60
          MKLVTVYVLVGGWRKERKPSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYD
Sbjct: 1  MKLVTVYVLVGGWRKERKPSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYD 60

Query: 61 VLKPTSTYGITGRGVPYSVST 82
          VLKPTSTYGITGRGVPYSVST
Sbjct: 61 VLKPTSTYGITGRGVPYSVST 81

[Close]
BLAST of Csa4G287540 vs. TrEMBL
Match: A0A0A0KZ93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287560 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.2e-16
Identity = 44/70 (62.86%), Postives = 59/70 (84.29%), Query Frame = 1 

Query: 13  WRKERK--PSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGI 72
           WRKE++   SISKAF++F+A+L DLE++IDE N+N  LKNR+GAG++PY+V+KP S  G+
Sbjct: 71  WRKEKEIQKSISKAFEKFKANLTDLEKKIDELNENKDLKNRYGAGIIPYEVMKPRSKPGV 130

Query: 73  TGRGVPYSVS 81
           TG GVPYSVS
Sbjct: 131 TGIGVPYSVS 140

[Close]
BLAST of Csa4G287540 vs. TrEMBL
Match: A0A0A0KX70_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287010 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.8e-16
Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 1 

Query: 13  WRKERK--PSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGI 72
           WRKE++   SISKAF++F+A+L DLE++IDE N+N  LKNR+GA ++PY+ +KP S  GI
Sbjct: 60  WRKEKEIQKSISKAFEKFKANLTDLEKKIDELNQNKDLKNRYGAAIIPYEAMKPRSKPGI 119

Query: 73  TGRGVPYSVS 81
           TG GVPYSVS
Sbjct: 120 TGSGVPYSVS 129

[Close]
BLAST of Csa4G287540 vs. TrEMBL
Match: A0A0A0L0J8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G286950 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.0e-15
Identity = 40/61 (65.57%), Postives = 53/61 (86.89%), Query Frame = 1 

Query: 21 ISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITGRGVPYSVS 80
          I+KAF +F+  L +LE+ ID+ N+NN+LKNR GAG+VPY+VLKPTS +G+TG+GVPYSVS
Sbjct: 2  IAKAFDKFKMKLDELEKTIDQRNENNELKNRRGAGLVPYEVLKPTSGFGVTGKGVPYSVS 61

Query: 81 T 82
          T
Sbjct: 62 T 62

[Close]
BLAST of Csa4G287540 vs. TrEMBL
Match: F6GUA7_VITVI (Lipoxygenase OS=Vitis vinifera GN=VIT_06s0004g01470 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.0e-15
Identity = 44/68 (64.71%), Postives = 52/68 (76.47%), Query Frame = 1 

Query: 13  WRKERKPSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITG 72
           W KE  P+I KAF+RF   LK+LE+ I+  NK+N LKNR GAGVVPYDVLKP S  G+TG
Sbjct: 837 WGKE--PAIKKAFERFAERLKELEKIINARNKDNSLKNRGGAGVVPYDVLKPFSKQGVTG 896

Query: 73  RGVPYSVS 81
            GVPYS+S
Sbjct: 897 EGVPYSIS 902

[Close]
BLAST of Csa4G287540 vs. TAIR10
Match: AT3G45140.1 (AT3G45140.1 lipoxygenase 2)

HSP 1 Score: 79.0 bits (193), Expect = 1.6e-15
Identity = 40/68 (58.82%), Postives = 47/68 (69.12%), Query Frame = 1 

Query: 13  WRKERKPSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITG 72
           W  E  P I+ AF+RF+  L+ LE  IDE N N  LKNR GAGVV Y++LKPTS +G+TG
Sbjct: 830 WANE--PVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEHGVTG 889

Query: 73  RGVPYSVS 81
            GVPYS+S
Sbjct: 890 MGVPYSIS 895

[Close]
BLAST of Csa4G287540 vs. TAIR10
Match: AT1G67560.1 (AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 70.5 bits (171), Expect = 5.5e-13
Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = 1 

Query: 21  ISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITGRGVPYSVS 80
           + K F +F   L  +E+ I+E NK+ KLKNR GAG+ PY++L PTS +G+TGRG+P S+S
Sbjct: 857 VVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGRGIPNSIS 916

[Close]
BLAST of Csa4G287540 vs. TAIR10
Match: AT1G55020.1 (AT1G55020.1 lipoxygenase 1)

HSP 1 Score: 61.2 bits (147), Expect = 3.4e-10
Identity = 30/68 (44.12%), Postives = 43/68 (63.24%), Query Frame = 1 

Query: 13  WRKERKPSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITG 72
           W  E++    +AF++F   +K++E+ IDE N +  LKNR G   +PY +L P+S  G+TG
Sbjct: 793 WAAEKEAL--EAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEGGVTG 852

Query: 73  RGVPYSVS 81
           RG+P SVS
Sbjct: 853 RGIPNSVS 858

[Close]
BLAST of Csa4G287540 vs. TAIR10
Match: AT1G72520.1 (AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 58.9 bits (141), Expect = 1.7e-09
Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 1 

Query: 21  ISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITGRGVPYSVS 80
           I  AF  F A +  +E++ID+ N++   +NR GAGV+PY+++ P+S  G+T RGVP SVS
Sbjct: 866 IVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGVLPYELMAPSSEPGVTCRGVPNSVS 925

[Close]
BLAST of Csa4G287540 vs. TAIR10
Match: AT1G17420.1 (AT1G17420.1 lipoxygenase 3)

HSP 1 Score: 56.6 bits (135), Expect = 8.3e-09
Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 1 

Query: 21  ISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITGRGVPYSVS 80
           I +AF  F A +  +E++I++ N +   +NR GAGV+PY++L P+S  G+T RGVP SVS
Sbjct: 859 IVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVPSSEPGVTCRGVPNSVS 918

[Close]
BLAST of Csa4G287540 vs. NCBI nr
Match: gi|700198974|gb|KGN54132.1| (hypothetical protein Csa_4G287540 [Cucumis sativus])

HSP 1 Score: 166.4 bits (420), Expect = 2.1e-38
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1 

Query: 1  MKLVTVYVLVGGWRKERKPSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYD 60
          MKLVTVYVLVGGWRKERKPSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYD
Sbjct: 1  MKLVTVYVLVGGWRKERKPSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYD 60

Query: 61 VLKPTSTYGITGRGVPYSVST 82
          VLKPTSTYGITGRGVPYSVST
Sbjct: 61 VLKPTSTYGITGRGVPYSVST 81

[Close]
BLAST of Csa4G287540 vs. NCBI nr
Match: gi|449448968|ref|XP_004142237.1| (PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-27
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 1 

Query: 18  KPSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITGRGVPY 77
           +PSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITGRGVPY
Sbjct: 767 EPSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITGRGVPY 826

Query: 78  SVST 82
           SVST
Sbjct: 827 SVST 830

[Close]
BLAST of Csa4G287540 vs. NCBI nr
Match: gi|659097677|ref|XP_008449754.1| (PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-23
Identity = 56/64 (87.50%), Postives = 60/64 (93.75%), Query Frame = 1 

Query: 18  KPSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITGRGVPY 77
           +P+I KAFKRFQA+LKDLEQQIDENNKN  LKNRHGAGVVPY+VLKPTST GITGRGVPY
Sbjct: 766 EPAIDKAFKRFQANLKDLEQQIDENNKNKSLKNRHGAGVVPYEVLKPTSTDGITGRGVPY 825

Query: 78  SVST 82
           SVST
Sbjct: 826 SVST 829

[Close]
BLAST of Csa4G287540 vs. NCBI nr
Match: gi|700198976|gb|KGN54134.1| (hypothetical protein Csa_4G287560 [Cucumis sativus])

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-16
Identity = 44/70 (62.86%), Postives = 59/70 (84.29%), Query Frame = 1 

Query: 13  WRKERK--PSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGI 72
           WRKE++   SISKAF++F+A+L DLE++IDE N+N  LKNR+GAG++PY+V+KP S  G+
Sbjct: 71  WRKEKEIQKSISKAFEKFKANLTDLEKKIDELNENKDLKNRYGAGIIPYEVMKPRSKPGV 130

Query: 73  TGRGVPYSVS 81
           TG GVPYSVS
Sbjct: 131 TGIGVPYSVS 140

[Close]
BLAST of Csa4G287540 vs. NCBI nr
Match: gi|778693083|ref|XP_011653576.1| (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 3.0e-16
Identity = 41/63 (65.08%), Postives = 54/63 (85.71%), Query Frame = 1 

Query: 19  PSISKAFKRFQASLKDLEQQIDENNKNNKLKNRHGAGVVPYDVLKPTSTYGITGRGVPYS 78
           P I+KAF +F+  L +LE+ ID+ N+NN+LKNR GAG+VPY+VLKPTS +G+TG+GVPYS
Sbjct: 769 PMIAKAFDKFKMKLDELEKTIDQRNENNELKNRRGAGLVPYEVLKPTSGFGVTGKGVPYS 828

Query: 79  VST 82
           VST
Sbjct: 829 VST 831

The following BLAST results are available for this feature:
BLAST of Csa4G287540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LOX2_ARATH2.8e-1458.82Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1[more]
LOX21_SOLTU2.3e-1356.45Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=... [more]
LOX23_HORVU7.5e-1250.79Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1[more]
LOX6_ARATH9.8e-1251.67Lipoxygenase 6, chloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=2 SV=1[more]
LOX31_SOLTU1.3e-1156.67Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum GN=LOX3.1 PE=... [more]
BLAST of Csa4G287540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0K8_CUCSA1.5e-38100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287540 PE=4 SV=1[more]
A0A0A0KZ93_CUCSA1.2e-1662.86Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287560 PE=4 SV=1[more]
A0A0A0KX70_CUCSA7.8e-1661.43Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287010 PE=4 SV=1[more]
A0A0A0L0J8_CUCSA1.0e-1565.57Uncharacterized protein OS=Cucumis sativus GN=Csa_4G286950 PE=4 SV=1[more]
F6GUA7_VITVI3.0e-1564.71Lipoxygenase OS=Vitis vinifera GN=VIT_06s0004g01470 PE=3 SV=1[more]
BLAST of Csa4G287540 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G45140.11.6e-1558.82 lipoxygenase 2[more]
AT1G67560.15.5e-1351.67 PLAT/LH2 domain-containing lipoxygenase family protein[more]
AT1G55020.13.4e-1044.12 lipoxygenase 1[more]
AT1G72520.11.7e-0946.67 PLAT/LH2 domain-containing lipoxygenase family protein[more]
AT1G17420.18.3e-0946.67 lipoxygenase 3[more]
BLAST of Csa4G287540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198974|gb|KGN54132.1|2.1e-38100.00hypothetical protein Csa_4G287540 [Cucumis sativus][more]
gi|449448968|ref|XP_004142237.1|1.3e-2798.44PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis sativus][more]
gi|659097677|ref|XP_008449754.1|1.5e-2387.50PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis melo][more]
gi|700198976|gb|KGN54134.1|1.7e-1662.86hypothetical protein Csa_4G287560 [Cucumis sativus][more]
gi|778693083|ref|XP_011653576.1|3.0e-1665.08PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000907LipOase
IPR013819LipOase_C
Vocabulary: Molecular Function
TermDefinition
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G287540.1Csa4G287540.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000907LipoxygenasePANTHERPTHR11771LIPOXYGENASEcoord: 16..81
score: 8.6
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 17..64
score: 2.0
IPR013819Lipoxygenase, C-terminalPROFILEPS51393LIPOXYGENASE_3coord: 1..81
score: 22
IPR013819Lipoxygenase, C-terminalunknownSSF48484Lipoxigenasecoord: 18..80
score: 9.81
NoneNo IPR availableunknownCoilCoilcoord: 25..52
scor
NoneNo IPR availableGENE3DG3DSA:1.20.245.10coord: 18..80
score: 1.1
NoneNo IPR availablePANTHERPTHR11771:SF42PROTEIN C13C4.7coord: 16..81
score: 8.6

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G287540Wax gourdcuwgoB390
Csa4G287540Cucurbita maxima (Rimu)cmacuB549
Csa4G287540Cucurbita moschata (Rifu)cmocuB538
Csa4G287540Cucurbita moschata (Rifu)cmocuB596
Csa4G287540Melon (DHL92) v3.5.1cumeB295
Csa4G287540Watermelon (Charleston Gray)cuwcgB292
Csa4G287540Watermelon (97103) v1cuwmB347
Csa4G287540Bottle gourd (USVL1VR-Ls)culsiB246
Csa4G287540Cucumber (Gy14) v2cgybcuB167
Csa4G287540Melon (DHL92) v3.6.1cumedB279
Csa4G287540Silver-seed gourdcarcuB0552
Csa4G287540Watermelon (97103) v2cuwmbB287