Csa4G252920 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G252920
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 10303282 .. 10303548 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGTTAAGAGCATACGGCCATGAGTGGCAAGGATGGCTAGTCGAGAAGGGCAAAGCTAGGCATTTAGGGATGTCACGAACCTCTAAAGAGGTTAGCATGCAGCCAACGAACTCCCAGACAAGTTGGGCATGCAGTCATGACAAGGCATGTAAGGAGAGTGAGGTAGGCGGCAAGAACTGTCAAAAGAACCTCTTAAGGCAAATGGTTTGGCGGCCAATAATGTTAAAGGCGTTATGGACTAGAGGTAAAGTGGAGTACAAATGA

mRNA sequence

ATGCCGTTAAGAGCATACGGCCATGAGTGGCAAGGATGGCTAGTCGAGAAGGGCAAAGCTAGGCATTTAGGGATGTCACGAACCTCTAAAGAGGTTAGCATGCAGCCAACGAACTCCCAGACAAGTTGGGCATGCAGTCATGACAAGGCATGTAAGGAGAGTGAGGTAGGCGGCAAGAACTGTCAAAAGAACCTCTTAAGGCAAATGGTTTGGCGGCCAATAATGTTAAAGGCGTTATGGACTAGAGGTAAAGTGGAGTACAAATGA

Coding sequence (CDS)

ATGCCGTTAAGAGCATACGGCCATGAGTGGCAAGGATGGCTAGTCGAGAAGGGCAAAGCTAGGCATTTAGGGATGTCACGAACCTCTAAAGAGGTTAGCATGCAGCCAACGAACTCCCAGACAAGTTGGGCATGCAGTCATGACAAGGCATGTAAGGAGAGTGAGGTAGGCGGCAAGAACTGTCAAAAGAACCTCTTAAGGCAAATGGTTTGGCGGCCAATAATGTTAAAGGCGTTATGGACTAGAGGTAAAGTGGAGTACAAATGA

Protein sequence

MPLRAYGHEWQGWLVEKGKARHLGMSRTSKEVSMQPTNSQTSWACSHDKACKESEVGGKNCQKNLLRQMVWRPIMLKALWTRGKVEYK*
Homology
[Close]
BLAST of Csa4G252920 vs. TrEMBL
Match: A0A0A0KYY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G252920 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.7e-46
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 

Query: 1  MPLRAYGHEWQGWLVEKGKARHLGMSRTSKEVSMQPTNSQTSWACSHDKACKESEVGGKN 60
          MPLRAYGHEWQGWLVEKGKARHLGMSRTSKEVSMQPTNSQTSWACSHDKACKESEVGGKN
Sbjct: 1  MPLRAYGHEWQGWLVEKGKARHLGMSRTSKEVSMQPTNSQTSWACSHDKACKESEVGGKN 60

Query: 61 CQKNLLRQMVWRPIMLKALWTRGKVEYK 89
          CQKNLLRQMVWRPIMLKALWTRGKVEYK
Sbjct: 61 CQKNLLRQMVWRPIMLKALWTRGKVEYK 88

[Close]
BLAST of Csa4G252920 vs. NCBI nr
Match: gi|700198841|gb|KGN53999.1| (hypothetical protein Csa_4G252920 [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 3.9e-46
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 

Query: 1  MPLRAYGHEWQGWLVEKGKARHLGMSRTSKEVSMQPTNSQTSWACSHDKACKESEVGGKN 60
          MPLRAYGHEWQGWLVEKGKARHLGMSRTSKEVSMQPTNSQTSWACSHDKACKESEVGGKN
Sbjct: 1  MPLRAYGHEWQGWLVEKGKARHLGMSRTSKEVSMQPTNSQTSWACSHDKACKESEVGGKN 60

Query: 61 CQKNLLRQMVWRPIMLKALWTRGKVEYK 89
          CQKNLLRQMVWRPIMLKALWTRGKVEYK
Sbjct: 61 CQKNLLRQMVWRPIMLKALWTRGKVEYK 88

The following BLAST results are available for this feature:
BLAST of Csa4G252920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYY4_CUCSA2.7e-46100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G252920 PE=4 SV=1[more]
BLAST of Csa4G252920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198841|gb|KGN53999.1|3.9e-46100.00hypothetical protein Csa_4G252920 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G252920.1Csa4G252920.1mRNA