Csa4G246410 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G246410
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Alcohol oxidase
Location	Chr4 : 10235278 .. 10237516 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGAACCTGGAAAGCGACCAAACCAAAATATGGGACATTTCTGTGCGGCGGTGATTGGCGGCGGCGGCGGCGGTGACGACGGGGAAACAAATCACCAACCCCACCAACACTGCGTGATAGAGCTCCACGGCGGTGCCGACAGCTTCCACGACGGAGCATCGGTAGAAATTTCACAACATGCAAACTCCAATAATGACTACTACTCCTCCGCCGGCCACCTCTCCGCCTCGGAAATGGAGTCTCTTGCTGCTCTATGCGATACATTTTTACCGTCCGTCGCTCCATCCACCGCTGCAGATAGATCCACTGCCTTTTTCTTTGAGACCTCCGCATCTGCTATTGGAACTCCTGACAGAGTAAGTTGAAAAATATCATTTTTTTTCTTTATACTTTAAATTATTATATATATATATATAATAATTAACTTACCATTATTAGTTGAATAATCTATATTTTCAAAACAAAATATACTTTGTATGTTGATGCATGCAAGTATATATACAAGTAGAAAGAAAAAAATTTAACCATTGACCATGGTTAATCATATAAAAAAATAAAATTTGGAAGGTCGGATTTGTTAACAATTTTTGTCTTTGATTTTCTTTTTTTCAAATTTACGCTTTTCTCGATTTCTTTATTAACATCTAAATTCTTTGTCTTTTTTTTTTTTTTTGTATTTTAAAAACTTATTTATTTTACATTCCAAAATCTTAGTCTGATTTTTTCAACTTATTTTTAGAAAATCAAGAAAAATATCAAGCTTTGCATGGTAACATTAGACTGTGCTTGACAACATTTTTTTTTTTTTTTGTTTTTTTGTTTTTTTGAAACTTTTATTCAATATTTCAAAATATTTGAACTACTTTTAGTTAACTTTTTTATAAAAAATTATATTAACTTTTTTTCTTTTTCTTAAGAAAAAAATCAATGATCTTCAAATAATTAGTTAACTTAGTATCTAAAATTTGTACATAACCGGGTGTTCAACCTTAGATCAAAACAAAGTTTATGGTGAAGTTTATGGGGCATTTGGATCAGGTTTCTAATATTTAGGATTTATATAAAAAAAAAAAATAGAACCATTTTTGTCCAAACATACACTTAAAAAGAATGAATTATTTTTAAAATAATAGATTTTAAGAATATTTAGAACTTATAGCAAATTTTATAACTGACAGTCAATAATATAATATGCTATAGTGATGAAAGAATATAAGTGATAGATTCAAAAATTTTGTTGTAATCTGTAAATATTTTAATTTATTTGTGCTATTTTTAAAAATATCTCTAAAATGAACTCGAAGTAAATAGTAAGAATAAGAATATATTGTATGCTTTTTTTTTTTAATTTTTCAGAATAAAAGAGTTAGAATTTCGAAAGGAAATTTTGTGATTGGACTTGACAGCAATAAATTCTTCCTACCATCTAACTATTGTACTACCTCAAAAATAGAAAAAGCAAAAAAAAGTAAAGATTTTTTATTTAGAAAAAGAAACTTTCTATTTGTTACAAAATGTGGTTTCTCTTCTCTCTCTATTCATCACCACATTATAGTTCTTACTTCCTAATTAGTAAAAGAAATAGTCGCTCTCCTAATTTACTTTCTTTTCATACTACCTACCTATATTTAGGGCTAATTGTTTGAAACTCTGAACCTAGTTCGAACTGTTATTTTATCCGGTGCTTATTAAACATCATGCAAATTCATTACCTAACTATGATTGTGAGACAAATATTATTTTGTAGTGATCTCATTAAATAACTCTTTTCTACTCTTGATGTTGTATAAAATAGAAAAGAAAAAAAAAAGAAAAACCCAACTTCTTAGTAATAGGTCTATATTTAATATGTAACAATTTAGTCTCTCAATTTTTAAAAACATTTTAAAGTTGGAATGTAATATTTTGATATATATGTAGGTAGGGGAGATGATAAAGGAGAGAGTTAAACATCCAAAGAAATGGCTAGTGAGAGTTACTCTATGGTTGTTATCAACATGGTATGGGACATACATTCTATGTGGTAATAAAAGCCTTTCAAACCATTTCCCATACTTTGAGAGATTTTCAAAAGTTCCTCAAAAGAAAAGAGAACAAATTGCACTCTCTTGGTCCCTAAGCTACTTTTTTCTACTTAGAATGTTGTTCAGAACCATTAAGATCTTTTGTCTTCTCGCTTTCTTTACACAGGTAAGTTCTTTCTTTCTGTTCGTTACGTTTATAAAAAATACTTAG

mRNA sequence

ATGAGCGAACCTGGAAAGCGACCAAACCAAAATATGGGACATTTCTGTGCGGCGGTGATTGGCGGCGGCGGCGGCGGTGACGACGGGGAAACAAATCACCAACCCCACCAACACTGCGTGATAGAGCTCCACGGCGGTGCCGACAGCTTCCACGACGGAGCATCGGTAGAAATTTCACAACATGCAAACTCCAATAATGACTACTACTCCTCCGCCGGCCACCTCTCCGCCTCGGAAATGGAGTCTCTTGCTGCTCTATGCGATACATTTTTACCGTCCGTCGCTCCATCCACCGCTGCAGATAGATCCACTGCCTTTTTCTTTGAGACCTCCGCATCTGCTATTGGAACTCCTGACAGAGTAGGGGAGATGATAAAGGAGAGAGTTAAACATCCAAAGAAATGGCTAGTGAGAGTTACTCTATGGTTGTTATCAACATGGTATGGGACATACATTCTATGTGGTAATAAAAGCCTTTCAAACCATTTCCCATACTTTGAGAGATTTTCAAAAGTTCCTCAAAAGAAAAGAGAACAAATTGCACTCTCTTGGTCCCTAAGCTACTTTTTTCTACTTAGAATGTTGTTCAGAACCATTAAGATCTTTTGTCTTCTCGCTTTCTTTACACAGGTAAGTTCTTTCTTTCTGTTCGTTACGTTTATAAAAAATACTTAG

Coding sequence (CDS)

ATGAGCGAACCTGGAAAGCGACCAAACCAAAATATGGGACATTTCTGTGCGGCGGTGATTGGCGGCGGCGGCGGCGGTGACGACGGGGAAACAAATCACCAACCCCACCAACACTGCGTGATAGAGCTCCACGGCGGTGCCGACAGCTTCCACGACGGAGCATCGGTAGAAATTTCACAACATGCAAACTCCAATAATGACTACTACTCCTCCGCCGGCCACCTCTCCGCCTCGGAAATGGAGTCTCTTGCTGCTCTATGCGATACATTTTTACCGTCCGTCGCTCCATCCACCGCTGCAGATAGATCCACTGCCTTTTTCTTTGAGACCTCCGCATCTGCTATTGGAACTCCTGACAGAGTAGGGGAGATGATAAAGGAGAGAGTTAAACATCCAAAGAAATGGCTAGTGAGAGTTACTCTATGGTTGTTATCAACATGGTATGGGACATACATTCTATGTGGTAATAAAAGCCTTTCAAACCATTTCCCATACTTTGAGAGATTTTCAAAAGTTCCTCAAAAGAAAAGAGAACAAATTGCACTCTCTTGGTCCCTAAGCTACTTTTTTCTACTTAGAATGTTGTTCAGAACCATTAAGATCTTTTGTCTTCTCGCTTTCTTTACACAGGTAAGTTCTTTCTTTCTGTTCGTTACGTTTATAAAAAATACTTAG

Protein sequence

MSEPGKRPNQNMGHFCAAVIGGGGGGDDGETNHQPHQHCVIELHGGADSFHDGASVEISQHANSNNDYYSSAGHLSASEMESLAALCDTFLPSVAPSTAADRSTAFFFETSASAIGTPDRVGEMIKERVKHPKKWLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQIALSWSLSYFFLLRMLFRTIKIFCLLAFFTQVSSFFLFVTFIKNT*

Homology

[Close]

BLAST of Csa4G246410 vs. Swiss-Prot
Match: FAO4A_ARATH (Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana GN=FAO4A PE=3 SV=2)

HSP 1 Score: 161.8 bits (408), Expect = 8.9e-39
Identity = 76/134 (56.72%), Postives = 94/134 (70.15%), Query Frame = 1


Query: 80  MESLAALCDTFLPSVAPSTAA--DRSTAFFFETSASAIGTPDRVGEMIKERVKHPKKWLV 139
           MESL A+CDTF+ S+  S     D   A +F  SAS  GTPDRV  ++ ER+ HPKKW++
Sbjct: 1   MESLVAICDTFISSIDDSGVGHVDDCVAGYFSASASQTGTPDRVARLMSERLHHPKKWIL 60

Query: 140 RVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQIALSWSLSYFFLLRMLFR 199
           R  LWLLSTW G+ +LCG +S +  FPYF RF ++P+K+RE+I L+WS SYF LLRMLFR
Sbjct: 61  RAGLWLLSTWIGSLVLCGWRSFTGEFPYFRRFCRLPEKRREEILLNWSSSYFSLLRMLFR 120

Query: 200 TIKIFCLLAFFTQV 212
           TIK+   L FFTQV
Sbjct: 121 TIKLISALVFFTQV 134

[Close]

BLAST of Csa4G246410 vs. Swiss-Prot
Match: FAO1_LOTJA (Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus GN=FAO1 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.7e-18
Identity = 53/145 (36.55%), Postives = 76/145 (52.41%), Query Frame = 1


Query: 76  SASEMESLAALCDTFLPSVAPST--------AADRSTAFFFETSASAIGTPDRVGEMIKE 135
           S+SEMESLA++C+  LP +             +     FF+ TSAS    P  V E++ +
Sbjct: 23  SSSEMESLASICEVILPPLPMDALKIKKHDDVSIEDVEFFWNTSASHYPIPHEVAEILSK 82

Query: 136 RVKHPKKWLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQIALSWSLS 195
           R       L+RV LWLL+T  GT++LCG    S  +P+   FS +  KKRE++   W  +
Sbjct: 83  RSLIEAVILIRVVLWLLATRLGTFLLCGLLCFSEKWPFINNFSSMSLKKRERVMQWWLKN 142

Query: 196 YFFL-LRMLFRTIKIFCLLAFFTQV 212
            F   +R+ F  +K+ CL A+FT V
Sbjct: 143 RFITPIRLAFAYLKVLCLFAYFTWV 167

[Close]

BLAST of Csa4G246410 vs. Swiss-Prot
Match: FAO4B_ARATH (Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana GN=FAO4B PE=2 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 3.4e-14
Identity = 49/138 (35.51%), Postives = 74/138 (53.62%), Query Frame = 1


Query: 76  SASEMESLAALCDTFLPSVAPSTAADRSTAFFFETSASAIGT-PDRVGEMIKERVKHPKK 135
           S S+++SLA +C TFLP   P T +++     F  ++S      D V EMI +  +    
Sbjct: 28  SPSQIQSLAVICQTFLP---PETTSEQQAVNSFHVASSTQPPFTDEVAEMIVKNGRSEAV 87

Query: 136 WLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQIALSWSLSYFFLL-- 195
            ++R+ L +LS  +GT +LCG+  L   +P+  +FS++P  KRE I  +WS    FLL  
Sbjct: 88  KVLRIILMILSFRFGTLLLCGSLCLDKSWPFVLKFSQLPLDKREAILRNWSRQSGFLLPF 147

Query: 196 RMLFRTIKIFCLLAFFTQ 211
           R+ F   K + L  FF+Q
Sbjct: 148 RITFFLAKFYTLFYFFSQ 162

[Close]

BLAST of Csa4G246410 vs. Swiss-Prot
Match: FAO2_LOTJA (Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus GN=FAO2 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.6e-11
Identity = 45/144 (31.25%), Postives = 73/144 (50.69%), Query Frame = 1


Query: 75  LSASEMESLAALCDTFLPSVA-----PSTAADRSTAFFFETSASAIGTPDRVGEMI-KER 134
           LS+S+M  +AA+C+   PS         ++ D++ + F+  S S    PD   E++ K  
Sbjct: 27  LSSSQMHVIAAICEALFPSQPLDSQNNQSSVDKALSAFYTASGSQAPLPDEAAELLFKFN 86

Query: 135 VKHPKKW-LVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQIALSWSLS 194
              P+   LV   L +LS   GT +LCG   L   +P+  +FS++P +KRE+I   WS  
Sbjct: 87  RSFPEALSLVSWVLLILSFRLGTLLLCGTLCLDWRWPFIHKFSEIPLEKREEILKRWSRE 146

Query: 195 YFFL-LRMLFRTIKIFCLLAFFTQ 211
             ++ LR++F   K+ C    F++
Sbjct: 147 KCWIPLRLVFVLTKLVCFYNLFSR 170

[Close]

BLAST of Csa4G246410 vs. Swiss-Prot
Match: FAO3_ARATH (Long-chain-alcohol oxidase FAO3 OS=Arabidopsis thaliana GN=FAO3 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 49/162 (30.25%), Postives = 80/162 (49.38%), Query Frame = 1


Query: 67  DYYSSAGH-----LSASEMESLAALCDTFLPSVAP-----STAADR-----STAFFFETS 126
           D Y  AG      ++ +EMESLA+ C+  LPSV P     S   D      +   F+ TS
Sbjct: 2   DKYKVAGKFGLPDITVAEMESLASFCEAVLPSVQPPPEELSGEGDNHRNKEALRSFYSTS 61

Query: 127 ASAIGTPDRVGEMIKERVKHPKKWLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSK 186
            S      +  E++ +R         R+ L+LL+T  GT ++CG + L + +P+ E+FS+
Sbjct: 62  GSKTPVLRQSIELVTKRGTIEAYIATRLILFLLATRLGTLLICGTECLVSRWPFVEKFSE 121

Query: 187 VPQKKREQIALSWSLSYFFL-LRMLFRTIKIFCLLAFFTQVS 213
           +  +KRE++      ++    +R  F  IK+  L  FF++V+
Sbjct: 122 LSLEKRERVLQKQFKNWILTPIRAAFVYIKVAFLFCFFSRVN 163

[Close]

BLAST of Csa4G246410 vs. TrEMBL
Match: A0A0A0KWN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G246410 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 4.2e-128
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1


Query: 1   MSEPGKRPNQNMGHFCAAVIGGGGGGDDGETNHQPHQHCVIELHGGADSFHDGASVEISQ 60
           MSEPGKRPNQNMGHFCAAVIGGGGGGDDGETNHQPHQHCVIELHGGADSFHDGASVEISQ
Sbjct: 1   MSEPGKRPNQNMGHFCAAVIGGGGGGDDGETNHQPHQHCVIELHGGADSFHDGASVEISQ 60

Query: 61  HANSNNDYYSSAGHLSASEMESLAALCDTFLPSVAPSTAADRSTAFFFETSASAIGTPDR 120
           HANSNNDYYSSAGHLSASEMESLAALCDTFLPSVAPSTAADRSTAFFFETSASAIGTPDR
Sbjct: 61  HANSNNDYYSSAGHLSASEMESLAALCDTFLPSVAPSTAADRSTAFFFETSASAIGTPDR 120

Query: 121 VGEMIKERVKHPKKWLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQI 180
           VGEMIKERVKHPKKWLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQI
Sbjct: 121 VGEMIKERVKHPKKWLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQI 180

Query: 181 ALSWSLSYFFLLRMLFRTIKIFCLLAFFTQVSSFFLFVTFIKNT 225
           ALSWSLSYFFLLRMLFRTIKIFCLLAFFTQVSSFFLFVTFIKNT
Sbjct: 181 ALSWSLSYFFLLRMLFRTIKIFCLLAFFTQVSSFFLFVTFIKNT 224

[Close]

BLAST of Csa4G246410 vs. TrEMBL
Match: M5WR25_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014756mg PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.7e-42
Identity = 86/139 (61.87%), Postives = 108/139 (77.70%), Query Frame = 1


Query: 75  LSASEMESLAALCDTFLPSVAPS-TAADRSTAFFFETSASAIGTPDRVGEMIKERVKHPK 134
           LS+ EMESL ALCDTFLPS+  S T  + S   F+ TSAS  GTP RVG +I ER+KHPK
Sbjct: 52  LSSREMESLTALCDTFLPSIDVSDTTTNASLVAFYRTSASMAGTPQRVGGLISERMKHPK 111

Query: 135 KWLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQIALSWSLSYFFLLR 194
            WL+R+ LW LSTW G++ILCG  SLS+ FPYF+ F ++ Q+KRE+I LSWSLSYF+LLR
Sbjct: 112 LWLMRLALWFLSTWIGSFILCGRASLSSQFPYFQSFPQMSQQKREEILLSWSLSYFYLLR 171

Query: 195 MLFRTIKIFCLLAFFTQVS 213
           MLF+++K+  LL FFTQV+
Sbjct: 172 MLFKSMKLLTLLVFFTQVN 190

[Close]

BLAST of Csa4G246410 vs. TrEMBL
Match: A0A067KNM1_JATCU (Long-chain-alcohol oxidase OS=Jatropha curcas GN=JCGZ_06718 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-41
Identity = 88/140 (62.86%), Postives = 109/140 (77.86%), Query Frame = 1


Query: 75  LSASEMESLAALCDTFLPS---VAPSTAADRSTAFFFETSASAIGTPDRVGEMIKERVKH 134
           LS  EMESL+ALCDTFLPS   V+ S AAD S A FF +SAS  GTP R+G +I +R+KH
Sbjct: 31  LSFPEMESLSALCDTFLPSNDVVSSSAAADDSIAKFFLSSASMAGTPQRIGGLISQRLKH 90

Query: 135 PKKWLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQIALSWSLSYFFL 194
           PKKWL+RV LW+LST  GT+ILCG  S+S HFP+F +FS++   KRE+I  SWSLS+F L
Sbjct: 91  PKKWLIRVVLWMLSTRVGTFILCGLLSISTHFPFFLKFSQIHLHKREKILHSWSLSFFSL 150

Query: 195 LRMLFRTIKIFCLLAFFTQV 212
           LRMLF+T+K+ CLL FF+QV
Sbjct: 151 LRMLFKTVKLLCLLVFFSQV 170

[Close]

BLAST of Csa4G246410 vs. TrEMBL
Match: A0A061G722_THECC (Long-chain fatty alcohol dehydrogenase family protein OS=Theobroma cacao GN=TCM_016707 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.1e-40
Identity = 89/188 (47.34%), Postives = 126/188 (67.02%), Query Frame = 1


Query: 24  GGGDDGETNHQPHQHCVIELHGGADSFHDGASVEISQHANSNNDYYSSAGHLSASEMESL 83
           G  ++     +  Q  +IEL  G D        E  Q+ N    Y +S   +S+ EMESL
Sbjct: 342 GSMEENGVGRREEQTTMIELSTGIDIEKLPLWEEERQYRNC---YVNS---ISSREMESL 401

Query: 84  AALCDTFLPSVAPSTAADRSTAFFFETSASAIGTPDRVGEMIKERVKHPKKWLVRVTLWL 143
            A+CD FLPS+  S A   + A F+++SAS   TP+RVG ++ ER++HPKKW++R+ LWL
Sbjct: 402 TAICDAFLPSLHVSAADADAVATFYQSSASMAATPERVGGLLSERMEHPKKWMIRLALWL 461

Query: 144 LSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQIALSWSLSYFFLLRMLFRTIKIFC 203
           LSTW GT++LCG +SLS +FP+F  FS++ Q+KRE+I LSWSLS+F+ LRMLF++ K+  
Sbjct: 462 LSTWLGTFVLCGPRSLSTNFPFFHTFSQLSQQKREEILLSWSLSFFYHLRMLFKSTKLLT 521

Query: 204 LLAFFTQV 212
           LL FF+QV
Sbjct: 522 LLVFFSQV 523

[Close]

BLAST of Csa4G246410 vs. TrEMBL
Match: F6HJ27_VITVI (Long-chain-alcohol oxidase OS=Vitis vinifera GN=VIT_02s0087g00630 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.3e-39
Identity = 85/138 (61.59%), Postives = 103/138 (74.64%), Query Frame = 1


Query: 75  LSASEMESLAALCDTFLPSV-APSTAADRSTAFFFETSASAIGTPDRVGEMIKERVKHPK 134
           LS+ EMESL A+ DTFLPSV AP  AA      F+ TSAS  GTP  VG +I ER++HPK
Sbjct: 35  LSSREMESLIAISDTFLPSVEAPHNAAHAYVDKFYRTSASMAGTPHIVGGLISERLEHPK 94

Query: 135 KWLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQIALSWSLSYFFLLR 194
            WL RV LWLLSTW+GT+I+CG  S+S+HFPYF+ F +V   KR +I LSWSLSYF L+R
Sbjct: 95  LWLSRVVLWLLSTWFGTFIICGLASMSSHFPYFQSFPQVSPHKRHEIVLSWSLSYFSLIR 154

Query: 195 MLFRTIKIFCLLAFFTQV 212
           MLFR++K+  LL FFTQV
Sbjct: 155 MLFRSLKLVTLLVFFTQV 172

[Close]

BLAST of Csa4G246410 vs. TAIR10
Match: AT4G19380.1 (AT4G19380.1 Long-chain fatty alcohol dehydrogenase family protein)

HSP 1 Score: 161.8 bits (408), Expect = 5.0e-40
Identity = 76/134 (56.72%), Postives = 94/134 (70.15%), Query Frame = 1


Query: 80  MESLAALCDTFLPSVAPSTAA--DRSTAFFFETSASAIGTPDRVGEMIKERVKHPKKWLV 139
           MESL A+CDTF+ S+  S     D   A +F  SAS  GTPDRV  ++ ER+ HPKKW++
Sbjct: 1   MESLVAICDTFISSIDDSGVGHVDDCVAGYFSASASQTGTPDRVARLMSERLHHPKKWIL 60

Query: 140 RVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQIALSWSLSYFFLLRMLFR 199
           R  LWLLSTW G+ +LCG +S +  FPYF RF ++P+K+RE+I L+WS SYF LLRMLFR
Sbjct: 61  RAGLWLLSTWIGSLVLCGWRSFTGEFPYFRRFCRLPEKRREEILLNWSSSYFSLLRMLFR 120

Query: 200 TIKIFCLLAFFTQV 212
           TIK+   L FFTQV
Sbjct: 121 TIKLISALVFFTQV 134

[Close]

BLAST of Csa4G246410 vs. TAIR10
Match: AT4G28570.1 (AT4G28570.1 Long-chain fatty alcohol dehydrogenase family protein)

HSP 1 Score: 80.1 bits (196), Expect = 1.9e-15
Identity = 49/138 (35.51%), Postives = 74/138 (53.62%), Query Frame = 1


Query: 76  SASEMESLAALCDTFLPSVAPSTAADRSTAFFFETSASAIGT-PDRVGEMIKERVKHPKK 135
           S S+++SLA +C TFLP   P T +++     F  ++S      D V EMI +  +    
Sbjct: 28  SPSQIQSLAVICQTFLP---PETTSEQQAVNSFHVASSTQPPFTDEVAEMIVKNGRSEAV 87

Query: 136 WLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQIALSWSLSYFFLL-- 195
            ++R+ L +LS  +GT +LCG+  L   +P+  +FS++P  KRE I  +WS    FLL  
Sbjct: 88  KVLRIILMILSFRFGTLLLCGSLCLDKSWPFVLKFSQLPLDKREAILRNWSRQSGFLLPF 147

Query: 196 RMLFRTIKIFCLLAFFTQ 211
           R+ F   K + L  FF+Q
Sbjct: 148 RITFFLAKFYTLFYFFSQ 162

[Close]

BLAST of Csa4G246410 vs. TAIR10
Match: AT3G23410.1 (AT3G23410.1 fatty alcohol oxidase 3)

HSP 1 Score: 68.2 bits (165), Expect = 7.5e-12
Identity = 49/162 (30.25%), Postives = 80/162 (49.38%), Query Frame = 1


Query: 67  DYYSSAGH-----LSASEMESLAALCDTFLPSVAP-----STAADR-----STAFFFETS 126
           D Y  AG      ++ +EMESLA+ C+  LPSV P     S   D      +   F+ TS
Sbjct: 2   DKYKVAGKFGLPDITVAEMESLASFCEAVLPSVQPPPEELSGEGDNHRNKEALRSFYSTS 61

Query: 127 ASAIGTPDRVGEMIKERVKHPKKWLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSK 186
            S      +  E++ +R         R+ L+LL+T  GT ++CG + L + +P+ E+FS+
Sbjct: 62  GSKTPVLRQSIELVTKRGTIEAYIATRLILFLLATRLGTLLICGTECLVSRWPFVEKFSE 121

Query: 187 VPQKKREQIALSWSLSYFFL-LRMLFRTIKIFCLLAFFTQVS 213
           +  +KRE++      ++    +R  F  IK+  L  FF++V+
Sbjct: 122 LSLEKRERVLQKQFKNWILTPIRAAFVYIKVAFLFCFFSRVN 163

[Close]

BLAST of Csa4G246410 vs. TAIR10
Match: AT1G03990.1 (AT1G03990.1 Long-chain fatty alcohol dehydrogenase family protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-10
Identity = 41/146 (28.08%), Postives = 73/146 (50.00%), Query Frame = 1


Query: 76  SASEMESLAALCDTFLPSVAPSTAA----------DRSTAFFFETSASAIGTPDRVGEMI 135
           S S++++L+++CD  +P V   +            D   +FF  +S+ +   PD V E++
Sbjct: 29  SKSDLQALSSICDAIMPPVPLESLNLEMKLKVLRNDALLSFFKSSSSESHVRPDEVAELL 88

Query: 136 KERVKHPKKWLVRVTLWLLSTWYGTYILCGNKSL-SNHFPYFERFSKVPQKKREQIALSW 195
             +       +VR+ L +L+   GT +LCG   L   H+P+  +FS++  +KRE++   W
Sbjct: 89  ATKAIPLTVLVVRIVLRILTFRLGTLLLCGLVCLDKKHWPFLLKFSEMSLEKREKVLQRW 148

Query: 196 SLSYFF-LLRMLFRTIKIFCLLAFFT 210
           +  ++  L R+ F  IK   L  +FT
Sbjct: 149 NTQWYNPLARIGFMMIKAIFLFYYFT 174

[Close]

BLAST of Csa4G246410 vs. NCBI nr
Match: gi|700198837|gb|KGN53995.1| (hypothetical protein Csa_4G246410 [Cucumis sativus])

HSP 1 Score: 465.3 bits (1196), Expect = 6.0e-128
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1


Query: 1   MSEPGKRPNQNMGHFCAAVIGGGGGGDDGETNHQPHQHCVIELHGGADSFHDGASVEISQ 60
           MSEPGKRPNQNMGHFCAAVIGGGGGGDDGETNHQPHQHCVIELHGGADSFHDGASVEISQ
Sbjct: 1   MSEPGKRPNQNMGHFCAAVIGGGGGGDDGETNHQPHQHCVIELHGGADSFHDGASVEISQ 60

Query: 61  HANSNNDYYSSAGHLSASEMESLAALCDTFLPSVAPSTAADRSTAFFFETSASAIGTPDR 120
           HANSNNDYYSSAGHLSASEMESLAALCDTFLPSVAPSTAADRSTAFFFETSASAIGTPDR
Sbjct: 61  HANSNNDYYSSAGHLSASEMESLAALCDTFLPSVAPSTAADRSTAFFFETSASAIGTPDR 120

Query: 121 VGEMIKERVKHPKKWLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQI 180
           VGEMIKERVKHPKKWLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQI
Sbjct: 121 VGEMIKERVKHPKKWLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQI 180

Query: 181 ALSWSLSYFFLLRMLFRTIKIFCLLAFFTQVSSFFLFVTFIKNT 225
           ALSWSLSYFFLLRMLFRTIKIFCLLAFFTQVSSFFLFVTFIKNT
Sbjct: 181 ALSWSLSYFFLLRMLFRTIKIFCLLAFFTQVSSFFLFVTFIKNT 224

[Close]

BLAST of Csa4G246410 vs. NCBI nr
Match: gi|659087027|ref|XP_008444238.1| (PREDICTED: long-chain-alcohol oxidase FAO4A isoform X1 [Cucumis melo])

HSP 1 Score: 397.1 bits (1019), Expect = 2.0e-107
Identity = 190/211 (90.05%), Postives = 200/211 (94.79%), Query Frame = 1


Query: 1   MSEPGKRPNQNMGHFCAAVIGGGGGGDDGETNHQPHQHCVIELHGGADSFHDGASVEISQ 60
           MSEPGKR NQNMG+FCAA    GGGGDDGETNHQPH HCVIELHGGADSFHDGASVEISQ
Sbjct: 1   MSEPGKRRNQNMGYFCAAA--NGGGGDDGETNHQPHHHCVIELHGGADSFHDGASVEISQ 60

Query: 61  HANSNNDYYSSAGHLSASEMESLAALCDTFLPSVAPSTAADRSTAFFFETSASAIGTPDR 120
           HANSNNDYYSSAGHLSA+EMESLAALCDTFLPSVAP+TAADRSTA FFETSASA+GTP+R
Sbjct: 61  HANSNNDYYSSAGHLSAAEMESLAALCDTFLPSVAPATAADRSTAVFFETSASAVGTPER 120

Query: 121 VGEMIKERVKHPKKWLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQI 180
           VGEMI ERV+HPKKWLVRV+LW+LSTWYGTYILCGN+SLSNHFPYF+RFSKV QKKREQI
Sbjct: 121 VGEMIMERVRHPKKWLVRVSLWMLSTWYGTYILCGNESLSNHFPYFKRFSKVSQKKREQI 180

Query: 181 ALSWSLSYFFLLRMLFRTIKIFCLLAFFTQV 212
           ALSWSLSYFFLLRM FRTIKI CLLAFFTQV
Sbjct: 181 ALSWSLSYFFLLRMFFRTIKILCLLAFFTQV 209

[Close]

BLAST of Csa4G246410 vs. NCBI nr
Match: gi|659087029|ref|XP_008444239.1| (PREDICTED: long-chain-alcohol oxidase FAO4A isoform X2 [Cucumis melo])

HSP 1 Score: 228.0 bits (580), Expect = 1.6e-56
Identity = 110/123 (89.43%), Postives = 115/123 (93.50%), Query Frame = 1


Query: 1   MSEPGKRPNQNMGHFCAAVIGGGGGGDDGETNHQPHQHCVIELHGGADSFHDGASVEISQ 60
           MSEPGKR NQNMG+FCAA    GGGGDDGETNHQPH HCVIELHGGADSFHDGASVEISQ
Sbjct: 1   MSEPGKRRNQNMGYFCAAA--NGGGGDDGETNHQPHHHCVIELHGGADSFHDGASVEISQ 60

Query: 61  HANSNNDYYSSAGHLSASEMESLAALCDTFLPSVAPSTAADRSTAFFFETSASAIGTPDR 120
           HANSNNDYYSSAGHLSA+EMESLAALCDTFLPSVAP+TAADRSTA FFETSASA+GTP+R
Sbjct: 61  HANSNNDYYSSAGHLSAAEMESLAALCDTFLPSVAPATAADRSTAVFFETSASAVGTPER 120

Query: 121 VGE 124
           V E
Sbjct: 121 VDE 121

[Close]

BLAST of Csa4G246410 vs. NCBI nr
Match: gi|1009157794|ref|XP_015896944.1| (PREDICTED: long-chain-alcohol oxidase FAO4A-like [Ziziphus jujuba])

HSP 1 Score: 183.0 bits (463), Expect = 6.0e-43
Identity = 102/215 (47.44%), Postives = 131/215 (60.93%), Query Frame = 1


Query: 5   GKRPNQNMGHFCAAVIGGGGGGDDGETNHQPHQHCVIELHGGADSFHDGASVEISQHANS 64
           GK  NQN          GG        ++   +H  IEL  G + + D      +Q    
Sbjct: 3   GKSMNQN----------GGRDAAFSSMSNGKQEHTDIEL--GNNGYVD------TQRLLL 62

Query: 65  NNDYYSSAGHLSASEMESLAALCDTFLPSVAPST-AADRSTAFFFETSASAIGTPDRVGE 124
             D    A  L++ EM+SL ALCDTFLPS+  S   +D S   F+  SAS  GTP R+  
Sbjct: 63  GGDKQLYANSLTSREMQSLTALCDTFLPSIPVSDLVSDESVIKFYTASASMAGTPQRLAG 122

Query: 125 MIKERVKHPKKWLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQIALS 184
           +I  R+KHPK+WL+R+TLW LSTW GT+ILCGN SLS+ FPYF+ F  V QKKRE+IALS
Sbjct: 123 LISNRLKHPKQWLMRLTLWALSTWIGTFILCGNLSLSSRFPYFQSFPMVSQKKREEIALS 182

Query: 185 WSLSYFFLLRMLFRTIKIFCLLAFFTQVSSFFLFV 219
           WSLSYF+LLRM F+++K+  LL +FTQV  F  F+
Sbjct: 183 WSLSYFYLLRMFFKSMKLLTLLVYFTQVLFFVSFL 199

[Close]

BLAST of Csa4G246410 vs. NCBI nr
Match: gi|595857537|ref|XP_007210564.1| (hypothetical protein PRUPE_ppa014756mg [Prunus persica])

HSP 1 Score: 180.3 bits (456), Expect = 3.9e-42
Identity = 86/139 (61.87%), Postives = 108/139 (77.70%), Query Frame = 1


Query: 75  LSASEMESLAALCDTFLPSVAPS-TAADRSTAFFFETSASAIGTPDRVGEMIKERVKHPK 134
           LS+ EMESL ALCDTFLPS+  S T  + S   F+ TSAS  GTP RVG +I ER+KHPK
Sbjct: 52  LSSREMESLTALCDTFLPSIDVSDTTTNASLVAFYRTSASMAGTPQRVGGLISERMKHPK 111

Query: 135 KWLVRVTLWLLSTWYGTYILCGNKSLSNHFPYFERFSKVPQKKREQIALSWSLSYFFLLR 194
            WL+R+ LW LSTW G++ILCG  SLS+ FPYF+ F ++ Q+KRE+I LSWSLSYF+LLR
Sbjct: 112 LWLMRLALWFLSTWIGSFILCGRASLSSQFPYFQSFPQMSQQKREEILLSWSLSYFYLLR 171

Query: 195 MLFRTIKIFCLLAFFTQVS 213
           MLF+++K+  LL FFTQV+
Sbjct: 172 MLFKSMKLLTLLVFFTQVN 190

The following BLAST results are available for this feature:

BLAST of Csa4G246410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FAO4A_ARATH	8.9e-39	56.72	Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana GN=FAO4A PE=3 SV=2	[more]
FAO1_LOTJA	1.7e-18	36.55	Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus GN=FAO1 PE=1 SV=1	[more]
FAO4B_ARATH	3.4e-14	35.51	Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana GN=FAO4B PE=2 SV=2	[more]
FAO2_LOTJA	1.6e-11	31.25	Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus GN=FAO2 PE=2 SV=1	[more]
FAO3_ARATH	1.3e-10	30.25	Long-chain-alcohol oxidase FAO3 OS=Arabidopsis thaliana GN=FAO3 PE=1 SV=1	[more]

BLAST of Csa4G246410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWN1_CUCSA	4.2e-128	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G246410 PE=4 SV=1	[more]
M5WR25_PRUPE	2.7e-42	61.87	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014756mg PE=4 SV=1	[more]
A0A067KNM1_JATCU	1.7e-41	62.86	Long-chain-alcohol oxidase OS=Jatropha curcas GN=JCGZ_06718 PE=3 SV=1	[more]
A0A061G722_THECC	1.1e-40	47.34	Long-chain fatty alcohol dehydrogenase family protein OS=Theobroma cacao GN=TCM_...	[more]
F6HJ27_VITVI	1.3e-39	61.59	Long-chain-alcohol oxidase OS=Vitis vinifera GN=VIT_02s0087g00630 PE=3 SV=1	[more]

BLAST of Csa4G246410 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19380.1	5.0e-40	56.72	Long-chain fatty alcohol dehydrogenase family protein	[more]
AT4G28570.1	1.9e-15	35.51	Long-chain fatty alcohol dehydrogenase family protein	[more]
AT3G23410.1	7.5e-12	30.25	fatty alcohol oxidase 3	[more]
AT1G03990.1	1.4e-10	28.08	Long-chain fatty alcohol dehydrogenase family protein	[more]

BLAST of Csa4G246410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700198837\|gb\|KGN53995.1\|	6.0e-128	100.00	hypothetical protein Csa_4G246410 [Cucumis sativus]	[more]
gi\|659087027\|ref\|XP_008444238.1\|	2.0e-107	90.05	PREDICTED: long-chain-alcohol oxidase FAO4A isoform X1 [Cucumis melo]	[more]
gi\|659087029\|ref\|XP_008444239.1\|	1.6e-56	89.43	PREDICTED: long-chain-alcohol oxidase FAO4A isoform X2 [Cucumis melo]	[more]
gi\|1009157794\|ref\|XP_015896944.1\|	6.0e-43	47.44	PREDICTED: long-chain-alcohol oxidase FAO4A-like [Ziziphus jujuba]	[more]
gi\|595857537\|ref\|XP_007210564.1\|	3.9e-42	61.87	hypothetical protein PRUPE_ppa014756mg [Prunus persica]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa4G246410.1	Csa4G246410.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa4G246410	Cucurbita moschata (Rifu)	cmocuB014
Csa4G246410	Cucurbita moschata (Rifu)	cmocuB459
Csa4G246410	Cucurbita moschata (Rifu)	cmocuB853
Csa4G246410	Melon (DHL92) v3.5.1	cumeB278
Csa4G246410	Melon (DHL92) v3.5.1	cumeB308
Csa4G246410	Watermelon (Charleston Gray)	cuwcgB284
Csa4G246410	Watermelon (97103) v1	cuwmB355
Csa4G246410	Cucurbita pepo (Zucchini)	cpecuB502
Csa4G246410	Cucurbita pepo (Zucchini)	cpecuB577
Csa4G246410	Cucurbita pepo (Zucchini)	cpecuB785
Csa4G246410	Bottle gourd (USVL1VR-Ls)	culsiB264
Csa4G246410	Bottle gourd (USVL1VR-Ls)	culsiB294
Csa4G246410	Cucumber (Gy14) v2	cgybcuB168
Csa4G246410	Melon (DHL92) v3.6.1	cumedB294
Csa4G246410	Melon (DHL92) v3.6.1	cumedB316
Csa4G246410	Silver-seed gourd	carcuB0508
Csa4G246410	Silver-seed gourd	carcuB0690
Csa4G246410	Silver-seed gourd	carcuB1059
Csa4G246410	Watermelon (97103) v2	cuwmbB285
Csa4G246410	Wax gourd	cuwgoB421
Csa4G246410	Cucurbita maxima (Rimu)	cmacuB023
Csa4G246410	Cucurbita maxima (Rimu)	cmacuB470
Csa4G246410	Cucurbita maxima (Rimu)	cmacuB865