Csa4G242890 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G242890
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 10144691 .. 10145207 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTAATACTGATTCCCCTTGTCCCGAGGAGCCTGTTATTAATCCTTCTCAACCATCTGCTTCTACTGCACCTTGTCCTAAACATGAGGATCCTGTTCATGTTCCTAAGAATGCGAAGAAGTTCTCCAAAGGGCCTAACATAATTACCACACAAGCTGGAAGAAGAAAGCTACCTCCAAATATTCCATCTGATCAAGATGCTCCAGGGCCTGCTCCTAAAACTCTGTCTCACAGCTACACATTATTTCAAGTCTCTCATGCTCCAGATACTGAGCACTCAGTTCGACCTCCTCGAGGACCTCAATCTTCTGATACAGAGCATCTTAATATATCTTCCAACAGCCTTATTACCTCATTCCTTGGCCTCTCGGATCTTCAGCATCCTGTCTGCTGAGTCTCGAGCTCGGAATAGTACCATTAACACCTTAACAGAGAGAAGATCAGAAGTGGATTATCTTATTCGTCATTTCAAAGCTCTTCTCCCTTCTTCAAGTACTACAAATTCTTCTGAAGAATGA

mRNA sequence

ATGCTCCAGGGCCTGCTCCTAAAACTCTGTCTCACAGCTACACATTATTTCAAGTCTCTCATGCTCCAGATACTGAGCACTCAGTTCGACCTCCTCGAGGACCTCAATCTTCTGATACAGAGCATCTTAATATATCTTCCAACAGCCTTATTACCTCATTCCTTGGCCTCTCGGATCTTCAGCATCCTGTCTGCTGAGTCTCGAGCTCGGAATAGTACCATTAACACCTTAACAGAGAGAAGATCAGAAGTGGATTATCTTATTCGTCATTTCAAAGCTCTTCTCCCTTCTTCAAGTACTACAAATTCTTCTGAAGAATGA

Coding sequence (CDS)

ATGCTCCAGGGCCTGCTCCTAAAACTCTGTCTCACAGCTACACATTATTTCAAGTCTCTCATGCTCCAGATACTGAGCACTCAGTTCGACCTCCTCGAGGACCTCAATCTTCTGATACAGAGCATCTTAATATATCTTCCAACAGCCTTATTACCTCATTCCTTGGCCTCTCGGATCTTCAGCATCCTGTCTGCTGAGTCTCGAGCTCGGAATAGTACCATTAACACCTTAACAGAGAGAAGATCAGAAGTGGATTATCTTATTCGTCATTTCAAAGCTCTTCTCCCTTCTTCAAGTACTACAAATTCTTCTGAAGAATGA

Protein sequence

MLQGLLLKLCLTATHYFKSLMLQILSTQFDLLEDLNLLIQSILIYLPTALLPHSLASRIFSILSAESRARNSTINTLTERRSEVDYLIRHFKALLPSSSTTNSSEE*
Homology
[Close]
BLAST of Csa4G242890 vs. TrEMBL
Match: A0A0A0KYU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G242890 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 3.1e-49
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1 

Query: 1   MLQGLLLKLCLTATHYFKSLMLQILSTQFDLLEDLNLLIQSILIYLPTALLPHSLASRIF 60
           MLQGLLLKLCLTATHYFKSLMLQILSTQFDLLEDLNLLIQSILIYLPTALLPHSLASRIF
Sbjct: 1   MLQGLLLKLCLTATHYFKSLMLQILSTQFDLLEDLNLLIQSILIYLPTALLPHSLASRIF 60

Query: 61  SILSAESRARNSTINTLTERRSEVDYLIRHFKALLPSSSTTNSSEE 107
           SILSAESRARNSTINTLTERRSEVDYLIRHFKALLPSSSTTNSSEE
Sbjct: 61  SILSAESRARNSTINTLTERRSEVDYLIRHFKALLPSSSTTNSSEE 106

[Close]
BLAST of Csa4G242890 vs. NCBI nr
Match: gi|700198831|gb|KGN53989.1| (hypothetical protein Csa_4G242890 [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 4.5e-49
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1 

Query: 1   MLQGLLLKLCLTATHYFKSLMLQILSTQFDLLEDLNLLIQSILIYLPTALLPHSLASRIF 60
           MLQGLLLKLCLTATHYFKSLMLQILSTQFDLLEDLNLLIQSILIYLPTALLPHSLASRIF
Sbjct: 1   MLQGLLLKLCLTATHYFKSLMLQILSTQFDLLEDLNLLIQSILIYLPTALLPHSLASRIF 60

Query: 61  SILSAESRARNSTINTLTERRSEVDYLIRHFKALLPSSSTTNSSEE 107
           SILSAESRARNSTINTLTERRSEVDYLIRHFKALLPSSSTTNSSEE
Sbjct: 61  SILSAESRARNSTINTLTERRSEVDYLIRHFKALLPSSSTTNSSEE 106

The following BLAST results are available for this feature:
BLAST of Csa4G242890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYU5_CUCSA3.1e-49100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G242890 PE=4 SV=1[more]
BLAST of Csa4G242890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198831|gb|KGN53989.1|4.5e-49100.00hypothetical protein Csa_4G242890 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G242890.1Csa4G242890.1mRNA