Csa4G227360 (gene) Cucumber (Chinese Long) v2

NameCsa4G227360
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 9993608 .. 9993781 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAGATGGATCCGTGATGGATGCTGGTCCAAAGGAGGGTGGGCCGCATGTTTTGAATGTGAACCTATCAACGCCCATGGGTGGACCGACGAAGGGGTTGAAACAGATTGGTGTGGATGCAATTGTAGGGCTGAGAGCTCATGGGCCGCTGGAAGATGGGCCATCGGATGA

mRNA sequence

ATGTGGAGATGGATCCGTGATGGATGCTGGTCCAAAGGAGGGTGGGCCGCATGTTTTGAATGTGAACCTATCAACGCCCATGGGTGGACCGACGAAGGGGTTGAAACAGATTGGTGTGGATGCAATTGTAGGGCTGAGAGCTCATGGGCCGCTGGAAGATGGGCCATCGGATGA

Coding sequence (CDS)

ATGTGGAGATGGATCCGTGATGGATGCTGGTCCAAAGGAGGGTGGGCCGCATGTTTTGAATGTGAACCTATCAACGCCCATGGGTGGACCGACGAAGGGGTTGAAACAGATTGGTGTGGATGCAATTGTAGGGCTGAGAGCTCATGGGCCGCTGGAAGATGGGCCATCGGATGA

Protein sequence

MWRWIRDGCWSKGGWAACFECEPINAHGWTDEGVETDWCGCNCRAESSWAAGRWAIG*
BLAST of Csa4G227360 vs. TrEMBL
Match: A0A0A0KWJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G227360 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 5.5e-32
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1

Query: 1  MWRWIRDGCWSKGGWAACFECEPINAHGWTDEGVETDWCGCNCRAESSWAAGRWAIG 58
          MWRWIRDGCWSKGGWAACFECEPINAHGWTDEGVETDWCGCNCRAESSWAAGRWAIG
Sbjct: 1  MWRWIRDGCWSKGGWAACFECEPINAHGWTDEGVETDWCGCNCRAESSWAAGRWAIG 57

BLAST of Csa4G227360 vs. NCBI nr
Match: gi|700198822|gb|KGN53980.1| (hypothetical protein Csa_4G227360 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 7.9e-32
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1

Query: 1  MWRWIRDGCWSKGGWAACFECEPINAHGWTDEGVETDWCGCNCRAESSWAAGRWAIG 58
          MWRWIRDGCWSKGGWAACFECEPINAHGWTDEGVETDWCGCNCRAESSWAAGRWAIG
Sbjct: 1  MWRWIRDGCWSKGGWAACFECEPINAHGWTDEGVETDWCGCNCRAESSWAAGRWAIG 57

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KWJ8_CUCSA5.5e-32100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G227360 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700198822|gb|KGN53980.1|7.9e-32100.00hypothetical protein Csa_4G227360 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU096630cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G227360.1Csa4G227360.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU096630CU096630transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None