Csa4G192730 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G192730
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRibonuclease 3-like protein; contains IPR011907 (Ribonuclease III)
LocationChr4 : 9563328 .. 9564273 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAGGAACTCCATGACACCAATTGAGCGCATACTATCTTATAAGTTTAAGAACAAGAAGCTGTTGGAAGAAGCCCTCACCCACTCCTCCTACCTCAACTCTCCCTCCTATGACCGCCTCGAGTTCATCGGAGATTCAGCTATTGGCCTCGCTATTTCCACTTACTTTTTTCCCCTTTATCCGGACCTCAATCAAGGCCAACTCACTTTACTTAGAGCTGCTAACGTTAGCACCGAGAAGCTTGCTCGTGTTGCAGTCCTCCATAGATTGTATAGTTATGTTAGACGCAACGCAGACGATCTTGATGATAATGTTAGAGAGTTTGCCGATGCCGTCGCTCTAGAAGACAACTCAATTCCCTATGTTGGCTTGGTGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCTGTGGCTGGTGCTATCTATGTAGATGTTGAGTTTGATCTTCAAAAACTATGGGCGGTGAGTTCTTAGTTACATTTGAAGTATGTTTAATATTATTACTTTTACTAGCTACACACCAATTAGTTCTCTTTTTTTCTTTTTTTTTCAATATTTTGTAGATTATTAAGGATTTTTTAAAGCCTATCTATACTCCTGAAGACTTAGAGGCAGATCCCCAACCTGTAACTCTGCTCTTTGAAGATTGCCAGAAAAAAGGGAAGCAGGTTCATATTGAGAATCAGGAAAAGGGTTCCACGTACGTCGCGAAAGTCTATGTTGACTGTAGGCCTGTTGCTTCTGGCTTTTCGAAGCAAAAACCAATCGCAAGGCTTAATGCTGCCCGAGAAGCTCTTATCATACTGTCGGATTCTACGGATACCAAAATTAAAAGGGTTGTAACTATTGATGGTATTGATGGTTCGTTTGAAATTGAAGGGGCAAAGCAGAAGCTACATGATTTTTGTTGCAGGAAAAAGTGGCAGAGTCCAAGTTACAGGTAA

mRNA sequence

ATGACACCAATTGAGCGCATACTATCTTATAAGTTTAAGAACAAGAAGCTGTTGGAAGAAGCCCTCACCCACTCCTCCTACCTCAACTCTCCCTCCTATGACCGCCTCGAGTTCATCGGAGATTCAGCTATTGGCCTCGCTATTTCCACTTACTTTTTTCCCCTTTATCCGGACCTCAATCAAGGCCAACTCACTTTACTTAGAGCTGCTAACGTTAGCACCGAGAAGCTTGCTCGTGTTGCAGTCCTCCATAGATTGTATAGTTATGTTAGACGCAACGCAGACGATCTTGATGATAATGTTAGAGAGTTTGCCGATGCCGTCGCTCTAGAAGACAACTCAATTCCCTATGTTGGCTTGGTGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCTGTGGCTGGTGCTATCTATGTAGATGTTGAGTTTGATCTTCAAAAACTATGGGCGATTATTAAGGATTTTTTAAAGCCTATCTATACTCCTGAAGACTTAGAGGCAGATCCCCAACCTGTAACTCTGCTCTTTGAAGATTGCCAGAAAAAAGGGAAGCAGGTTCATATTGAGAATCAGGAAAAGGGTTCCACGTACGTCGCGAAAGTCTATGTTGACTGTAGGCCTGTTGCTTCTGGCTTTTCGAAGCAAAAACCAATCGCAAGGCTTAATGCTGCCCGAGAAGCTCTTATCATACTGTCGGATTCTACGGATACCAAAATTAAAAGGGTTGTAACTATTGATGGTATTGATGGTTCGTTTGAAATTGAAGGGGCAAAGCAGAAGCTACATGATTTTTGTTGCAGGAAAAAGTGGCAGAGTCCAAGTTACAGGTAA

Coding sequence (CDS)

ATGACACCAATTGAGCGCATACTATCTTATAAGTTTAAGAACAAGAAGCTGTTGGAAGAAGCCCTCACCCACTCCTCCTACCTCAACTCTCCCTCCTATGACCGCCTCGAGTTCATCGGAGATTCAGCTATTGGCCTCGCTATTTCCACTTACTTTTTTCCCCTTTATCCGGACCTCAATCAAGGCCAACTCACTTTACTTAGAGCTGCTAACGTTAGCACCGAGAAGCTTGCTCGTGTTGCAGTCCTCCATAGATTGTATAGTTATGTTAGACGCAACGCAGACGATCTTGATGATAATGTTAGAGAGTTTGCCGATGCCGTCGCTCTAGAAGACAACTCAATTCCCTATGTTGGCTTGGTGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCTGTGGCTGGTGCTATCTATGTAGATGTTGAGTTTGATCTTCAAAAACTATGGGCGATTATTAAGGATTTTTTAAAGCCTATCTATACTCCTGAAGACTTAGAGGCAGATCCCCAACCTGTAACTCTGCTCTTTGAAGATTGCCAGAAAAAAGGGAAGCAGGTTCATATTGAGAATCAGGAAAAGGGTTCCACGTACGTCGCGAAAGTCTATGTTGACTGTAGGCCTGTTGCTTCTGGCTTTTCGAAGCAAAAACCAATCGCAAGGCTTAATGCTGCCCGAGAAGCTCTTATCATACTGTCGGATTCTACGGATACCAAAATTAAAAGGGTTGTAACTATTGATGGTATTGATGGTTCGTTTGAAATTGAAGGGGCAAAGCAGAAGCTACATGATTTTTGTTGCAGGAAAAAGTGGCAGAGTCCAAGTTACAGGTAA

Protein sequence

MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDCQKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKIKRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYR*
Homology
[Close]
BLAST of Csa4G192730 vs. Swiss-Prot
Match: RTL2_ARATH (Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana GN=RTL2 PE=1 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.5e-75
Identity = 148/277 (53.43%), Postives = 200/277 (72.20%), Query Frame = 1 

Query: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60
           M  +E+IL+YKF NK LL+EA+TH+S  + PSY+RLEFIGDSAIGLAIS Y +  YP L 
Sbjct: 60  MEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSLE 119

Query: 61  QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDN-SIPYVG 120
              L+LLRAANVSTEKLARV++ H LYS++RRNA  LD+ V+EF++AV  ED+ S+ Y G
Sbjct: 120 PHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYGG 179

Query: 121 LVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFED 180
           LVKAPKVLAD+ ES+AGA+YVDV FDLQ+LW I +  L+PI T +DL+  PQPV++LF+ 
Sbjct: 180 LVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFKL 239

Query: 181 CQKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTK 240
           C K  K++ I+N + G+  +A +Y+D   +ASG ++ K IARL AA+EAL  LS+     
Sbjct: 240 CHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEV--FP 299

Query: 241 IKRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 277
           ++ V+  D ++   ++  AK KL++ C +KKW  P Y
Sbjct: 300 VEMVIDEDSVE--IQLTHAKTKLNEICLKKKWPKPIY 332

[Close]
BLAST of Csa4G192730 vs. Swiss-Prot
Match: RTL2_ORYSJ (Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0271300 PE=2 SV=2)

HSP 1 Score: 227.3 bits (578), Expect = 2.1e-58
Identity = 133/285 (46.67%), Postives = 179/285 (62.81%), Query Frame = 1 

Query: 4   IERILSYKFKNKKLLEEALTHSSYLNSP-SYDRLEFIGDSAIGLAISTYFFPLYPDLNQG 63
           +ER+L Y+F++ +LLEEALTH S+ +   SY RLEF+GDSA+GLA S + +   P L  G
Sbjct: 40  VERLLRYQFRDGRLLEEALTHQSFADDAVSYQRLEFVGDSALGLAFSNFLYLTNPTLGPG 99

Query: 64  QLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALED----NSIPYV 123
            L+ LRAAN+STEKLARVAV H LY  +RRN   LD  V +F + V  E     +++PY 
Sbjct: 100 PLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPEDDLSTVPYG 159

Query: 124 G-LVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLF 183
           G +VKAPKVLADIVE++A A+YVD +FDL+KLW + +   +PI T E +  D QPVT+L 
Sbjct: 160 GSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAETI--DEQPVTMLH 219

Query: 184 EDCQKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTD 243
           E CQK GK    +  +KG   V  V+V    V  G S+QK IA+LNAAR+A   L+ +  
Sbjct: 220 ELCQKHGKMAQFKTWQKGGMTVVNVFVAGELVGIGSSEQKVIAKLNAARDATRKLAGA-- 279

Query: 244 TKIKRVVTIDGI-----DGSFEIEGAKQKLHDFCCRKKWQSPSYR 278
              K+ V   G+     D   E+   KQKL++ C R+ W  P ++
Sbjct: 280 ---KKQVLTTGVGNGLGDEIGELRECKQKLNEQCSRQNWPKPIFK 317

[Close]
BLAST of Csa4G192730 vs. Swiss-Prot
Match: RTL3_ARATH (Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana GN=RTL3 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 9.6e-43
Identity = 107/273 (39.19%), Postives = 150/273 (54.95%), Query Frame = 1 

Query: 4   IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
           +E+IL+Y F NK LL+EA+T  S    P +DRLEF GDS + +A + Y    YP+L   +
Sbjct: 7   VEKILNYSFVNKTLLKEAITQKS----PLFDRLEFFGDSILEVAFTNYICHTYPNLKVKE 66

Query: 64  LTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGLVKA 123
           L  LR ANVS EK AR+AV H L+ ++      L   V+ FA+AV  ED+ +PY GLVKA
Sbjct: 67  LRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDPVPYGGLVKA 126

Query: 124 PKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQ-PVTLLFEDCQK 183
           PK+LAD +ES+A  +++DV +D+++LW I +  L+PIYTP+DL   P+ P   LF    K
Sbjct: 127 PKILADTLESIAATVFIDVNYDVKRLWEIFRSLLEPIYTPDDLLLQPKLPFLTLFRLADK 186

Query: 184 KGKQ-VHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDS--TDTK 243
            G +      +   ST +     DC  V     K K     +    +L  +S++  TD  
Sbjct: 187 HGSESTSGIRKMTTSTKILLRNKDCLDVDLEDVKGKSFEICSTELFSLSTVSENSLTDEM 246

Query: 244 IKRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQ 273
            +  V ID    + E E  K KL + C  +K Q
Sbjct: 247 SQEEVVIDEDSPNVEPEDVKGKLFEICYTRKLQ 275


HSP 2 Score: 152.9 bits (385), Expect = 5.1e-36
Identity = 97/265 (36.60%), Postives = 151/265 (56.98%), Query Frame = 1 

Query: 4   IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
           +E+IL+Y F NK LL+E LTH+   NSP +  L F+G+SA+ LA + + +  YP L    
Sbjct: 418 VEKILNYSFVNKTLLKELLTHN---NSPLFQGLMFVGESALSLAFTKHLYLTYPMLEPKD 477

Query: 64  LTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGLVKA 123
           L++LR AN   +K A VAV   +Y     +    +    +F + +  ED+  PY  +VKA
Sbjct: 478 LSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFIELMGKEDD--PY-RVVKA 537

Query: 124 PKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEAD-PQPVTLLFEDCQK 183
           PK+L +++  VAGA+Y+DV++++Q+L  I +  L+PIYT +DL     QP  +LF    K
Sbjct: 538 PKILVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQLKQPFLMLFRLADK 597

Query: 184 KGKQVHIENQEKGST--YVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 243
            GKQ+     + G +   +A+VY+D   +ASG +K+   A+L AA EA+  LS+     I
Sbjct: 598 HGKQIDFRYSKDGGSRKNIAQVYMDDMFIASGCAKRIDTAKLLAAEEAIQKLSEC--MPI 657

Query: 244 KRVVTIDGIDGSFEIEGAKQKLHDF 266
           ++++  D +DG     G+   L  F
Sbjct: 658 EKIIHQDNLDGEVIQTGSSSLLTAF 674

[Close]
BLAST of Csa4G192730 vs. Swiss-Prot
Match: DCL1_ARATH (Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana GN=DCL1 PE=1 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 3.7e-42
Identity = 110/292 (37.67%), Postives = 155/292 (53.08%), Query Frame = 1 

Query: 4    IERILSYKFKNKKLLEEALTHSSYLNS--PSYDRLEFIGDSAIGLAISTYFFPLYPDLNQ 63
            +ER L Y+FK K LL EA+TH+S  +S    Y RLEF+GD+ +   I+ + F  Y  L  
Sbjct: 1562 LERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPP 1621

Query: 64   GQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPY---- 123
            G+LT LRAA V+ E  ARVAV H+L+ Y+R  +  L+  +REF   V  E +   +    
Sbjct: 1622 GRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFG 1681

Query: 124  VGLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLF 183
            +G  KAPKVL DIVES+AGAI++D   D    W + +  L+P+ TPE L     PV  L 
Sbjct: 1682 LGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRELQ 1741

Query: 184  EDCQKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTD 243
            E CQ++ + +  +    G+T   +V++D   V    + QK +A+  AAR AL  L +   
Sbjct: 1742 ERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEKEI 1801

Query: 244  TKIKRVVTIDGIDGSFEIEG------------AKQKLHDFCCRKKWQSPSYR 278
             + K     +G  G  + E              +Q L+D C RK W  PSYR
Sbjct: 1802 AESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYR 1851


HSP 2 Score: 57.8 bits (138), Expect = 2.2e-07
Identity = 47/172 (27.33%), Postives = 77/172 (44.77%), Query Frame = 1 

Query: 4    IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
            ++ ++SY     K+L EALT +S   +  Y+R E +GD+ +   +S + F  YP  ++GQ
Sbjct: 1346 LKNLISYPIPTSKIL-EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQ 1405

Query: 64   LTLLRAANVSTEKLARVAVLHRLYSYVRRNA----------------DDLDDNVREFAD- 123
            LT +R   VS   L + A++  L SY++ +                 +D  D    F D 
Sbjct: 1406 LTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSSFFDE 1465

Query: 124  ---AVALEDNSIPYVG--------------LVKAPKVLADIVESVAGAIYVD 142
                V+ E++ +   G               V + K LAD+VE++ G  YV+
Sbjct: 1466 EQKPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVE 1516

[Close]
BLAST of Csa4G192730 vs. Swiss-Prot
Match: DCL1_ORYSJ (Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica GN=DCL1 PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 6.9e-41
Identity = 106/281 (37.72%), Postives = 158/281 (56.23%), Query Frame = 1 

Query: 4    IERILSYKFKNKKLLEEALTHSSYLNS--PSYDRLEFIGDSAIGLAISTYFFPLYPDLNQ 63
            ++ +L  +F+NK LL EA+TH+S  +S    Y RLEF+GD+ +   I+ + F  Y DL  
Sbjct: 1541 LKGVLGIEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPP 1600

Query: 64   GQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALE-----DNSIP 123
            G+LT LRAA V+ E  ARVAV H+L+ ++R  +  L+  +REF   V  E      NS  
Sbjct: 1601 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGFNSFG 1660

Query: 124  YVGLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLL 183
             +G  KAPKVL DIVES+AGAI++D  +D   +W + +  L P+ TPE L     PV  L
Sbjct: 1661 -LGDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPM--HPVREL 1720

Query: 184  FEDCQKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDST 243
             E CQ++ + +  +    G+    +V+VD   +    + QK +A+  AAR AL++L +  
Sbjct: 1721 QERCQQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNALVVLKEK- 1780

Query: 244  DTKIKRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYR 278
            +T  K+    DG   +      +Q L+D C R++W  P YR
Sbjct: 1781 ETATKKEDERDGEKKNGAQMFTRQTLNDICLRRQWPMPQYR 1817


HSP 2 Score: 50.8 bits (120), Expect = 2.7e-05
Identity = 30/88 (34.09%), Postives = 47/88 (53.41%), Query Frame = 1 

Query: 4    IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
            ++ I+ Y     K+L EALT +S   +  Y+R E +GD+ +   +S + F  YP  ++GQ
Sbjct: 1324 LKDIIDYPVPATKIL-EALTAASCQETLCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQ 1383

Query: 64   LTLLRAANVSTEKLARVAVLHRLYSYVR 92
            LT +R   VS   L + A+   L SY++
Sbjct: 1384 LTRMRQQMVSNMVLYQYALNKTLQSYIQ 1410

[Close]
BLAST of Csa4G192730 vs. TrEMBL
Match: A0A0A0L020_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192730 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 9.4e-154
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 1 

Query: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60
           MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN
Sbjct: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60

Query: 61  QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGL 120
           QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGL
Sbjct: 61  QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGL 120

Query: 121 VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDC 180
           VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDC
Sbjct: 121 VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDC 180

Query: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240
           QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI
Sbjct: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240

Query: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYR 278
           KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYR
Sbjct: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYR 277

[Close]
BLAST of Csa4G192730 vs. TrEMBL
Match: A0A0A0L1E2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192230 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 7.0e-101
Identity = 189/273 (69.23%), Postives = 225/273 (82.42%), Query Frame = 1 

Query: 4   IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
           +ERILSY F NK LLEEALTH SY  S SY+RLEF+GDSAIGLA++ YFF   P L+QG 
Sbjct: 8   LERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLASPHLHQGH 67

Query: 64  LTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGLVKA 123
           L+LLRAANVSTEKLARVAV H LY+YVRR++  +DD V+EF D+VALE +S+PY G++KA
Sbjct: 68  LSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVPYGGMMKA 127

Query: 124 PKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDCQKK 183
           PKVLADIVESVAGA+YVDV FDLQKLW II+  L+PIYT E+L+ +PQPVT+LF+ CQ+ 
Sbjct: 128 PKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQVCQRN 187

Query: 184 GKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKIKRV 243
           GKQV I++ + GS  +A V+VD + VASG S QK IARLNAAREALI LSDS DT+IK  
Sbjct: 188 GKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSMDTRIKTF 247

Query: 244 VTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 277
           VTIDGID SFEIEGAKQKLHD C ++KWQ P+Y
Sbjct: 248 VTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNY 280

[Close]
BLAST of Csa4G192730 vs. TrEMBL
Match: V4TYN2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008694mg PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 2.2e-86
Identity = 169/274 (61.68%), Postives = 203/274 (74.09%), Query Frame = 1 

Query: 4   IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
           +E I++Y FKNK+LLEEALTHSSY +S SY RLEFIGD+A+GLA+S Y F  YP L+ GQ
Sbjct: 39  VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQ 98

Query: 64  LTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGLVKA 123
           L+LLRAAN+STEKLARVAV H  Y +VR +A  LDD VREFA+AV+ EDN+  Y G +KA
Sbjct: 99  LSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVREFAEAVSQEDNTAVYGGSIKA 158

Query: 124 PKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDCQKK 183
           PKVLADIVES+A AIYVD++FDLQKLW I +  L+PI T E+L+  PQPVTLLF+ CQK 
Sbjct: 159 PKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKN 218

Query: 184 GKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKIKRV 243
           GKQV I++  K    +A VYVD   VAS  S+QK IA+LNAAREAL  L+ S        
Sbjct: 219 GKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALEKLAQSMPVNCDVC 278

Query: 244 VTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYR 278
              D ID  FEIE AKQKLH+ C +KKW  PSY+
Sbjct: 279 EIFDDIDEKFEIEAAKQKLHELCGKKKWPKPSYK 312

[Close]
BLAST of Csa4G192730 vs. TrEMBL
Match: A0A067F3Y1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017515mg PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 4.9e-86
Identity = 168/274 (61.31%), Postives = 203/274 (74.09%), Query Frame = 1 

Query: 4   IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
           +E I++Y FKNK+LLEEALTHSSY +S SY RLEFIGD+A+GLA+S Y F  YP L+ GQ
Sbjct: 39  VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQ 98

Query: 64  LTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGLVKA 123
           L+LLRAAN+STEKLARVAV H  Y +VR +A  LDD V+EFA+AV+ EDN+  Y G +KA
Sbjct: 99  LSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKA 158

Query: 124 PKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDCQKK 183
           PKVLADIVES+A AIYVD++FDLQKLW I +  L+PI T E+L+  PQPVTLLF+ CQK 
Sbjct: 159 PKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKN 218

Query: 184 GKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKIKRV 243
           GKQV I++  K    +A VYVD   VAS  S+QK IA+LNAAREAL  L+ S        
Sbjct: 219 GKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALEKLAQSMPVNCDVC 278

Query: 244 VTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYR 278
              D ID  FEIE AKQKLH+ C +KKW  PSY+
Sbjct: 279 EIFDDIDEKFEIEAAKQKLHELCGKKKWPKPSYK 312

[Close]
BLAST of Csa4G192730 vs. TrEMBL
Match: A0A067F7H9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017515mg PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 4.9e-86
Identity = 168/274 (61.31%), Postives = 203/274 (74.09%), Query Frame = 1 

Query: 4   IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
           +E I++Y FKNK+LLEEALTHSSY +S SY RLEFIGD+A+GLA+S Y F  YP L+ GQ
Sbjct: 39  VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQ 98

Query: 64  LTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGLVKA 123
           L+LLRAAN+STEKLARVAV H  Y +VR +A  LDD V+EFA+AV+ EDN+  Y G +KA
Sbjct: 99  LSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKA 158

Query: 124 PKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDCQKK 183
           PKVLADIVES+A AIYVD++FDLQKLW I +  L+PI T E+L+  PQPVTLLF+ CQK 
Sbjct: 159 PKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKN 218

Query: 184 GKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKIKRV 243
           GKQV I++  K    +A VYVD   VAS  S+QK IA+LNAAREAL  L+ S        
Sbjct: 219 GKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALEKLAQSMPVNCDVC 278

Query: 244 VTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYR 278
              D ID  FEIE AKQKLH+ C +KKW  PSY+
Sbjct: 279 EIFDDIDEKFEIEAAKQKLHELCGKKKWPKPSYK 312

[Close]
BLAST of Csa4G192730 vs. TAIR10
Match: AT3G20420.1 (AT3G20420.1 RNAse THREE-like protein 2)

HSP 1 Score: 283.5 bits (724), Expect = 1.4e-76
Identity = 148/277 (53.43%), Postives = 200/277 (72.20%), Query Frame = 1 

Query: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60
           M  +E+IL+YKF NK LL+EA+TH+S  + PSY+RLEFIGDSAIGLAIS Y +  YP L 
Sbjct: 60  MEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSLE 119

Query: 61  QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDN-SIPYVG 120
              L+LLRAANVSTEKLARV++ H LYS++RRNA  LD+ V+EF++AV  ED+ S+ Y G
Sbjct: 120 PHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYGG 179

Query: 121 LVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFED 180
           LVKAPKVLAD+ ES+AGA+YVDV FDLQ+LW I +  L+PI T +DL+  PQPV++LF+ 
Sbjct: 180 LVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFKL 239

Query: 181 CQKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTK 240
           C K  K++ I+N + G+  +A +Y+D   +ASG ++ K IARL AA+EAL  LS+     
Sbjct: 240 CHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEV--FP 299

Query: 241 IKRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 277
           ++ V+  D ++   ++  AK KL++ C +KKW  P Y
Sbjct: 300 VEMVIDEDSVE--IQLTHAKTKLNEICLKKKWPKPIY 332

[Close]
BLAST of Csa4G192730 vs. TAIR10
Match: AT5G45150.1 (AT5G45150.1 RNAse THREE-like protein 3)

HSP 1 Score: 175.3 bits (443), Expect = 5.4e-44
Identity = 107/273 (39.19%), Postives = 150/273 (54.95%), Query Frame = 1 

Query: 4   IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
           +E+IL+Y F NK LL+EA+T  S    P +DRLEF GDS + +A + Y    YP+L   +
Sbjct: 7   VEKILNYSFVNKTLLKEAITQKS----PLFDRLEFFGDSILEVAFTNYICHTYPNLKVKE 66

Query: 64  LTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGLVKA 123
           L  LR ANVS EK AR+AV H L+ ++      L   V+ FA+AV  ED+ +PY GLVKA
Sbjct: 67  LRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDPVPYGGLVKA 126

Query: 124 PKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQ-PVTLLFEDCQK 183
           PK+LAD +ES+A  +++DV +D+++LW I +  L+PIYTP+DL   P+ P   LF    K
Sbjct: 127 PKILADTLESIAATVFIDVNYDVKRLWEIFRSLLEPIYTPDDLLLQPKLPFLTLFRLADK 186

Query: 184 KGKQ-VHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDS--TDTK 243
            G +      +   ST +     DC  V     K K     +    +L  +S++  TD  
Sbjct: 187 HGSESTSGIRKMTTSTKILLRNKDCLDVDLEDVKGKSFEICSTELFSLSTVSENSLTDEM 246

Query: 244 IKRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQ 273
            +  V ID    + E E  K KL + C  +K Q
Sbjct: 247 SQEEVVIDEDSPNVEPEDVKGKLFEICYTRKLQ 275


HSP 2 Score: 152.9 bits (385), Expect = 2.9e-37
Identity = 97/265 (36.60%), Postives = 151/265 (56.98%), Query Frame = 1 

Query: 4   IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
           +E+IL+Y F NK LL+E LTH+   NSP +  L F+G+SA+ LA + + +  YP L    
Sbjct: 418 VEKILNYSFVNKTLLKELLTHN---NSPLFQGLMFVGESALSLAFTKHLYLTYPMLEPKD 477

Query: 64  LTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGLVKA 123
           L++LR AN   +K A VAV   +Y     +    +    +F + +  ED+  PY  +VKA
Sbjct: 478 LSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFIELMGKEDD--PY-RVVKA 537

Query: 124 PKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEAD-PQPVTLLFEDCQK 183
           PK+L +++  VAGA+Y+DV++++Q+L  I +  L+PIYT +DL     QP  +LF    K
Sbjct: 538 PKILVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQLKQPFLMLFRLADK 597

Query: 184 KGKQVHIENQEKGST--YVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 243
            GKQ+     + G +   +A+VY+D   +ASG +K+   A+L AA EA+  LS+     I
Sbjct: 598 HGKQIDFRYSKDGGSRKNIAQVYMDDMFIASGCAKRIDTAKLLAAEEAIQKLSEC--MPI 657

Query: 244 KRVVTIDGIDGSFEIEGAKQKLHDF 266
           ++++  D +DG     G+   L  F
Sbjct: 658 EKIIHQDNLDGEVIQTGSSSLLTAF 674

[Close]
BLAST of Csa4G192730 vs. TAIR10
Match: AT1G01040.2 (AT1G01040.2 dicer-like 1)

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-43
Identity = 110/292 (37.67%), Postives = 155/292 (53.08%), Query Frame = 1 

Query: 4    IERILSYKFKNKKLLEEALTHSSYLNS--PSYDRLEFIGDSAIGLAISTYFFPLYPDLNQ 63
            +ER L Y+FK K LL EA+TH+S  +S    Y RLEF+GD+ +   I+ + F  Y  L  
Sbjct: 1563 LERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPP 1622

Query: 64   GQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPY---- 123
            G+LT LRAA V+ E  ARVAV H+L+ Y+R  +  L+  +REF   V  E +   +    
Sbjct: 1623 GRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFG 1682

Query: 124  VGLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLF 183
            +G  KAPKVL DIVES+AGAI++D   D    W + +  L+P+ TPE L     PV  L 
Sbjct: 1683 LGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRELQ 1742

Query: 184  EDCQKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTD 243
            E CQ++ + +  +    G+T   +V++D   V    + QK +A+  AAR AL  L +   
Sbjct: 1743 ERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEKEI 1802

Query: 244  TKIKRVVTIDGIDGSFEIEG------------AKQKLHDFCCRKKWQSPSYR 278
             + K     +G  G  + E              +Q L+D C RK W  PSYR
Sbjct: 1803 AESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYR 1852


HSP 2 Score: 57.8 bits (138), Expect = 1.3e-08
Identity = 47/172 (27.33%), Postives = 77/172 (44.77%), Query Frame = 1 

Query: 4    IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
            ++ ++SY     K+L EALT +S   +  Y+R E +GD+ +   +S + F  YP  ++GQ
Sbjct: 1347 LKNLISYPIPTSKIL-EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQ 1406

Query: 64   LTLLRAANVSTEKLARVAVLHRLYSYVRRNA----------------DDLDDNVREFAD- 123
            LT +R   VS   L + A++  L SY++ +                 +D  D    F D 
Sbjct: 1407 LTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSSFFDE 1466

Query: 124  ---AVALEDNSIPYVG--------------LVKAPKVLADIVESVAGAIYVD 142
                V+ E++ +   G               V + K LAD+VE++ G  YV+
Sbjct: 1467 EQKPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVE 1517

[Close]
BLAST of Csa4G192730 vs. TAIR10
Match: AT4G15417.1 (AT4G15417.1 RNAse II-like 1)

HSP 1 Score: 148.3 bits (373), Expect = 7.1e-36
Identity = 97/230 (42.17%), Postives = 137/230 (59.57%), Query Frame = 1 

Query: 4   IERILSYKFKNKKLLEEALTHSSYLN--SPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQ 63
           +E+IL+YKFK+K LL +A T +SY++  S SY+ LE +GDS + + I   F  LYP    
Sbjct: 32  LEKILNYKFKDKSLLLKAFTDASYVDDKSESYELLELLGDSILNMGIIYDFIKLYPKEAP 91

Query: 64  GQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGLV 123
           G LT LRA NV TEKLARVAV H+LYSY+R     L++ + EF +  A+E   +   GL+
Sbjct: 92  GPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFVE--AMEKYPLHSNGLL 151

Query: 124 KAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDCQ 183
           K PKVLADIVES  GAI++D     + +W +IK  L+PI   + +++   P+T L E CQ
Sbjct: 152 KVPKVLADIVESTIGAIFMDCN-STETVWKVIKPLLEPIIHLDKMKS--HPMTELNEMCQ 211

Query: 184 KKG-KQVHIENQEKGSTYVAKVYVDCRPVASGFSK-QKPIARLNAAREAL 230
           K+  K    +  E+  TY    +++ + V  G    +K  AR  AA+ A+
Sbjct: 212 KRNLKLTSKDTWEENQTYC--FHIEDKFVGCGHHPVKKETARNFAAKNAI 254

[Close]
BLAST of Csa4G192730 vs. TAIR10
Match: AT3G43920.2 (AT3G43920.2 dicer-like 3)

HSP 1 Score: 129.0 bits (323), Expect = 4.5e-30
Identity = 81/307 (26.38%), Postives = 139/307 (45.28%), Query Frame = 1 

Query: 4    IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
            +ER + ++F  K LL+EA+THSS   S SY+RLEF+GDS +   I+ + F  Y     G+
Sbjct: 1201 LERKIQHEFSAKFLLKEAITHSSLRESYSYERLEFLGDSVLDFLITRHLFNTYEQTGPGE 1260

Query: 64   LTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGLVKA 123
            +T LR+A V+ E  A+VAV + L+++++R A  L+  + ++  +    D +   +  ++ 
Sbjct: 1261 MTDLRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRSIPSIQG 1320

Query: 124  PKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDCQKK 183
            PK L D+VES+AGA+ +D   DL ++W + +  L P+ TP+ L+    P   L E C   
Sbjct: 1321 PKALGDVVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQL--PPYRELNELCDSL 1380

Query: 184  GKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKIKRV 243
            G    ++    G    A + +    V       +   +L   + A  +L+      I R 
Sbjct: 1381 GYFFRVKCSNDGVKAQATIQLQLDDVLLTGDGSEQTNKLALGKAASHLLTQLEKRNISRK 1440

Query: 244  VTIDGIDGSFEIE----------------------------------GAKQKLHDFCCRK 277
             ++     S ++                                   G +  LH+FC + 
Sbjct: 1441 TSLGDNQSSMDVNLACNHSDRETLTSETTEIQSIVIPFIGPINMKKGGPRGTLHEFCKKH 1500


HSP 2 Score: 50.8 bits (120), Expect = 1.5e-06
Identity = 27/75 (36.00%), Postives = 39/75 (52.00%), Query Frame = 1 

Query: 20   EALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQLTLLRAANVSTEKLAR 79
            EA+T  +   S S +RLE +GDS +    S + F  YPD ++GQL+  R + +S   L R
Sbjct: 1008 EAVTTLTCPESFSMERLELLGDSVLKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHR 1067

Query: 80   VAVLHRLYSYVRRNA 95
            +    +L  Y+R  A
Sbjct: 1068 LTTSRKLQGYIRNGA 1082

[Close]
BLAST of Csa4G192730 vs. NCBI nr
Match: gi|778697607|ref|XP_011654357.1| (PREDICTED: ribonuclease 3-like protein 2 [Cucumis sativus])

HSP 1 Score: 550.8 bits (1418), Expect = 1.3e-153
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 1 

Query: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60
           MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN
Sbjct: 380 MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 439

Query: 61  QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGL 120
           QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGL
Sbjct: 440 QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGL 499

Query: 121 VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDC 180
           VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDC
Sbjct: 500 VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDC 559

Query: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240
           QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI
Sbjct: 560 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 619

Query: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYR 278
           KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYR
Sbjct: 620 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYR 656

[Close]
BLAST of Csa4G192730 vs. NCBI nr
Match: gi|778697607|ref|XP_011654357.1| (PREDICTED: ribonuclease 3-like protein 2 [Cucumis sativus])

HSP 1 Score: 375.2 bits (962), Expect = 1.0e-100
Identity = 189/273 (69.23%), Postives = 225/273 (82.42%), Query Frame = 1 

Query: 4   IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
           +ERILSY F NK LLEEALTH SY  S SY+RLEF+GDSAIGLA++ YFF   P L+QG 
Sbjct: 8   LERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLASPHLHQGH 67

Query: 64  LTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGLVKA 123
           L+LLRAANVSTEKLARVAV H LY+YVRR++  +DD V+EF D+VALE +S+PY G++KA
Sbjct: 68  LSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVPYGGMMKA 127

Query: 124 PKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDCQKK 183
           PKVLADIVESVAGA+YVDV FDLQKLW II+  L+PIYT E+L+ +PQPVT+LF+ CQ+ 
Sbjct: 128 PKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQVCQRN 187

Query: 184 GKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKIKRV 243
           GKQV I++ + GS  +A V+VD + VASG S QK IARLNAAREALI LSDS DT+IK  
Sbjct: 188 GKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSMDTRIKTF 247

Query: 244 VTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 277
           VTIDGID SFEIEGAKQKLHD C ++KWQ P+Y
Sbjct: 248 VTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNY 280


HSP 2 Score: 550.8 bits (1418), Expect = 1.3e-153
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 1 

Query: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60
           MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN
Sbjct: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60

Query: 61  QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGL 120
           QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGL
Sbjct: 61  QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGL 120

Query: 121 VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDC 180
           VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDC
Sbjct: 121 VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDC 180

Query: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240
           QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI
Sbjct: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240

Query: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYR 278
           KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYR
Sbjct: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYR 277

[Close]
BLAST of Csa4G192730 vs. NCBI nr
Match: gi|659096535|ref|XP_008449149.1| (PREDICTED: ribonuclease 3-like protein 2 isoform X3 [Cucumis melo])

HSP 1 Score: 463.4 bits (1191), Expect = 2.8e-127
Identity = 242/277 (87.36%), Postives = 251/277 (90.61%), Query Frame = 1 

Query: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60
           MT IER LSYKFKNKKLLE ALTHSSY N+ SYDRLEFIGDSAIGLAIS YFF LYPDL+
Sbjct: 1   MTAIERKLSYKFKNKKLLEVALTHSSYPNTASYDRLEFIGDSAIGLAISNYFFSLYPDLD 60

Query: 61  QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGL 120
           QG+LTLLRAANVSTEKLARVAVLH LY YVRR+A DLDDNVREFADAVALEDNSIPY GL
Sbjct: 61  QGRLTLLRAANVSTEKLARVAVLHGLYDYVRRSAADLDDNVREFADAVALEDNSIPYGGL 120

Query: 121 VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDC 180
            KAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKD LKPIYTPEDLEA+PQPVTLLFE C
Sbjct: 121 KKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDLLKPIYTPEDLEAEPQPVTLLFEVC 180

Query: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240
           QK GKQV I+NQEKGS  VA+VYVD   VASG SKQKPIARLNAAR+ALIILSDS DTKI
Sbjct: 181 QKNGKQVVIKNQEKGSWNVARVYVDRTLVASGSSKQKPIARLNAARQALIILSDSMDTKI 240

Query: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYR 278
           K VVTIDGIDGSFEIEGA QKLHDFC RKKWQ+PSYR
Sbjct: 241 KTVVTIDGIDGSFEIEGATQKLHDFCSRKKWQNPSYR 277

[Close]
BLAST of Csa4G192730 vs. NCBI nr
Match: gi|659096531|ref|XP_008449147.1| (PREDICTED: ribonuclease 3-like protein 2 isoform X1 [Cucumis melo])

HSP 1 Score: 461.5 bits (1186), Expect = 1.1e-126
Identity = 241/276 (87.32%), Postives = 250/276 (90.58%), Query Frame = 1 

Query: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60
           MT IER LSYKFKNKKLLE ALTHSSY N+ SYDRLEFIGDSAIGLAIS YFF LYPDL+
Sbjct: 1   MTAIERKLSYKFKNKKLLEVALTHSSYPNTASYDRLEFIGDSAIGLAISNYFFSLYPDLD 60

Query: 61  QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGL 120
           QG+LTLLRAANVSTEKLARVAVLH LY YVRR+A DLDDNVREFADAVALEDNSIPY GL
Sbjct: 61  QGRLTLLRAANVSTEKLARVAVLHGLYDYVRRSAADLDDNVREFADAVALEDNSIPYGGL 120

Query: 121 VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDC 180
            KAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKD LKPIYTPEDLEA+PQPVTLLFE C
Sbjct: 121 KKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDLLKPIYTPEDLEAEPQPVTLLFEVC 180

Query: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240
           QK GKQV I+NQEKGS  VA+VYVD   VASG SKQKPIARLNAAR+ALIILSDS DTKI
Sbjct: 181 QKNGKQVVIKNQEKGSWNVARVYVDRTLVASGSSKQKPIARLNAARQALIILSDSMDTKI 240

Query: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 277
           K VVTIDGIDGSFEIEGA QKLHDFC RKKWQ+PSY
Sbjct: 241 KTVVTIDGIDGSFEIEGATQKLHDFCSRKKWQNPSY 276

[Close]
BLAST of Csa4G192730 vs. NCBI nr
Match: gi|659096533|ref|XP_008449148.1| (PREDICTED: ribonuclease 3-like protein 2 isoform X2 [Cucumis melo])

HSP 1 Score: 461.5 bits (1186), Expect = 1.1e-126
Identity = 241/276 (87.32%), Postives = 250/276 (90.58%), Query Frame = 1 

Query: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60
           MT IER LSYKFKNKKLLE ALTHSSY N+ SYDRLEFIGDSAIGLAIS YFF LYPDL+
Sbjct: 1   MTAIERKLSYKFKNKKLLEVALTHSSYPNTASYDRLEFIGDSAIGLAISNYFFSLYPDLD 60

Query: 61  QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGL 120
           QG+LTLLRAANVSTEKLARVAVLH LY YVRR+A DLDDNVREFADAVALEDNSIPY GL
Sbjct: 61  QGRLTLLRAANVSTEKLARVAVLHGLYDYVRRSAADLDDNVREFADAVALEDNSIPYGGL 120

Query: 121 VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDC 180
            KAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKD LKPIYTPEDLEA+PQPVTLLFE C
Sbjct: 121 KKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDLLKPIYTPEDLEAEPQPVTLLFEVC 180

Query: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240
           QK GKQV I+NQEKGS  VA+VYVD   VASG SKQKPIARLNAAR+ALIILSDS DTKI
Sbjct: 181 QKNGKQVVIKNQEKGSWNVARVYVDRTLVASGSSKQKPIARLNAARQALIILSDSMDTKI 240

Query: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 277
           K VVTIDGIDGSFEIEGA QKLHDFC RKKWQ+PSY
Sbjct: 241 KTVVTIDGIDGSFEIEGATQKLHDFCSRKKWQNPSY 276

The following BLAST results are available for this feature:
BLAST of Csa4G192730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RTL2_ARATH2.5e-7553.43Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana GN=RTL2 PE=1 SV=1[more]
RTL2_ORYSJ2.1e-5846.67Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0271300 PE... [more]
RTL3_ARATH9.6e-4339.19Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana GN=RTL3 PE=2 SV=1[more]
DCL1_ARATH3.7e-4237.67Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana GN=DCL1 PE=1 SV=2[more]
DCL1_ORYSJ6.9e-4137.72Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica GN=DCL1 PE=3 SV... [more]
BLAST of Csa4G192730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L020_CUCSA9.4e-154100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192730 PE=4 SV=1[more]
A0A0A0L1E2_CUCSA7.0e-10169.23Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192230 PE=4 SV=1[more]
V4TYN2_9ROSI2.2e-8661.68Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008694mg PE=4 SV=1[more]
A0A067F3Y1_CITSI4.9e-8661.31Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017515mg PE=4 SV=1[more]
A0A067F7H9_CITSI4.9e-8661.31Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017515mg PE=4 SV=1[more]
BLAST of Csa4G192730 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G20420.11.4e-7653.43 RNAse THREE-like protein 2[more]
AT5G45150.15.4e-4439.19 RNAse THREE-like protein 3[more]
AT1G01040.22.1e-4337.67 dicer-like 1[more]
AT4G15417.17.1e-3642.17 RNAse II-like 1[more]
AT3G43920.24.5e-3026.38 dicer-like 3[more]
BLAST of Csa4G192730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778697607|ref|XP_011654357.1|1.3e-153100.00PREDICTED: ribonuclease 3-like protein 2 [Cucumis sativus][more]
gi|778697607|ref|XP_011654357.1|1.0e-10069.23PREDICTED: ribonuclease 3-like protein 2 [Cucumis sativus][more]
gi|659096535|ref|XP_008449149.1|2.8e-12787.36PREDICTED: ribonuclease 3-like protein 2 isoform X3 [Cucumis melo][more]
gi|659096531|ref|XP_008449147.1|1.1e-12687.32PREDICTED: ribonuclease 3-like protein 2 isoform X1 [Cucumis melo][more]
gi|659096533|ref|XP_008449148.1|1.1e-12687.32PREDICTED: ribonuclease 3-like protein 2 isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000999RNase_III_dom
IPR014720dsRBD_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004525ribonuclease III activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0006396 RNA processing
cellular_component GO:0005575 cellular_component
molecular_function GO:0004525 ribonuclease III activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G192730.1Csa4G192730.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000999Ribonuclease III domainGENE3DG3DSA:1.10.1520.10coord: 3..165
score: 2.9
IPR000999Ribonuclease III domainPFAMPF00636Ribonuclease_3coord: 34..141
score: 6.4
IPR000999Ribonuclease III domainSMARTSM00535riboneu5coord: 16..166
score: 4.6
IPR000999Ribonuclease III domainPROFILEPS50142RNASE_3_2coord: 1..143
score: 35
IPR000999Ribonuclease III domainunknownSSF69065RNase III domain-likecoord: 3..164
score: 2.09
IPR014720Double-stranded RNA-binding domainGENE3DG3DSA:3.30.160.20coord: 188..240
score: 1.
IPR014720Double-stranded RNA-binding domainPROFILEPS50137DS_RBDcoord: 171..234
score: 8
NoneNo IPR availablePANTHERPTHR14950HELICASE-RELATEDcoord: 4..253
score: 9.7E
NoneNo IPR availablePANTHERPTHR14950:SF22SUBFAMILY NOT NAMEDcoord: 4..253
score: 9.7E
NoneNo IPR availableunknownSSF54768dsRNA-binding domain-likecoord: 125..232
score: 8.33

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G192730Cucumber (Gy14) v1cgycuB487
Csa4G192730Cucurbita maxima (Rimu)cmacuB664
Csa4G192730Cucurbita maxima (Rimu)cmacuB860
Csa4G192730Cucurbita moschata (Rifu)cmocuB652
Csa4G192730Cucurbita moschata (Rifu)cmocuB848
Csa4G192730Melon (DHL92) v3.5.1cumeB324
Csa4G192730Watermelon (Charleston Gray)cuwcgB302
Csa4G192730Watermelon (97103) v1cuwmB339
Csa4G192730Cucurbita pepo (Zucchini)cpecuB079
Csa4G192730Cucurbita pepo (Zucchini)cpecuB497
Csa4G192730Bottle gourd (USVL1VR-Ls)culsiB258
Csa4G192730Cucumber (Gy14) v2cgybcuB168
Csa4G192730Melon (DHL92) v3.6.1cumedB311
Csa4G192730Silver-seed gourdcarcuB0310
Csa4G192730Silver-seed gourdcarcuB0651
Csa4G192730Watermelon (97103) v2cuwmbB299
Csa4G192730Wax gourdcuwgoB406