Csa4G168980 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G168980
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRibosome biogenesis GTPase A; contains IPR016478 (GTPase, MTG1), IPR023179 (GTP-binding protein, orthogonal bundle domain), IPR027417 (P-loop containing nucleoside triphosphate hydrolase)
LocationChr4 : 8726349 .. 8729341 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAAAACCCCAAACCTCCGTCGTCGTCGGAGAGAACAAGAAATGAGAGGGATCACCGGAGTCGTGAAGAAGGCTCTTGGAGACATGGAGTTCACTGCCGGCGGTGGAGCCATCAATTGGTTCCCCGGCCACATGGCTGCAGCCACTCGTGCCATTCGTCATAGACTGAAGCTCGCGGACATGGTCATCGAGGTCAGGGATTCCCGAATTCCCTTGTCCTCGGCCAATCAAGACCTCCAGCCTCATCTCGCTTCCAAACGCCGCGTCATTGCCCTCAACAAGAAAGATTTGGCTAACCCTAATATCATGAATGTAAGACACCACTGAACCATTCTGTTTCATTGAGTTTTTGAAGTTTTGGCTATAGGATATGAAAATCATTTCCGAATTCGGAATCCTCTCTAACTATGAATTCTCAATATATATATTCTTCCGAATCTCCGTTTCAAAAGTCTGTAAATTGATATGTGAATGGATGTGTACGCTTGTGTATGTTCATTAATCAGTTTTTGTTTATAGTTTTTCTTTGTTCGCTTTGTTATCCTTACGACTTTAATTTTGCAGAAATGGGTTAACTTTTTTGACTCATGCAATCAAGATTGCGTACCAATTAACGCTCACAGTAAGAGTTCTGTTCGGAAGGTATTTTTCCTTTCTACAGTGCTGCAGTGGTATTCATTTATAGGTTGCAATTAATCTCGAGATTCTAGCACCTCATTTCCTATGATATATTGAATTGCTAGAACTATCGAAGATCGCATACTTTGTTGATACTTTTTTTTTTCTTTGGATGATGGCACTAGTTATGTTATTTATTATTTATTACTCACTTTAAAGATGAAAACTGATGAGTTAGACAAGTTTCTAGTTGTTTAGATTTTTCTTCATCCTTTCTGTTTTAAATTTAAAATTGAATGCTTATTAGTTTTGTGCATGTATGGTAAGTAAACTTAAAATGATCCTTTGACAACTCTTTAGACTTCTTTTTGTATTTACTTACACATTACATCTCAATGTTGAATTGTCAACTTGTCATAAGTGTATTGCAAATTGCAGTAGCTTATTATTGGATTTAGTGTTTAACTAGCTAGTTTGTTTGATTTAGTGTATTTCAATATTTATTTATTTTATTTTTCTGCTAAAAAGGCCTAACTGATTTTTTATTGATAAAAAAGCTTCTCGAGCTTGTGGAATTTAAACTGAAGGAAGCAATTTCAAGGGAACCTACTCTTCTTGTTATGGTCGTTGGTGTTCCGAATGTTGGGAAGTCGGCTTTAATTAATTCAATCCATCAAATTGCTTCTGAACGCTTTCCAGGTAAGACTAGTTCTTGGAGCAAGATGCCAATTTCTCTTTTCTATTGAAGTGTACATATTCTGTTTCGCTTGGTCTGGAGGCTTTGTTTATTAGACTTTTGTGGTTCAATAATTTTTCATAGTGCAGGAGAAAAGGAAGCGAGCTACTGTTGGTCCCTTGCCTGGGGTTACTCAAGATATAGCTGGCTACAAGGTAGTTTTGATCAACCACACATCTTCATTTTTAGTAATCAATTTCTACTTTTGCGTCTCCCCTCCTTTCTTCTTTGTGAGATGAAATCTTATAATCATGAAGTATCAACCATTTGCAATTCTTCTGATGTGCAGATTGCTCATCAACCTAGCATATATGTTCTAGACACTCCTGGTGTATTAGTTCCAAGTATCCAAGATATCGAGACAGGGTTAAAACTAGCACTTGCAGGTTGTTTCTAGTTTATAAGAATTTCTACTTTTTGTTTTTCAAACAACATTTTGGTAAGCTATATACTATAGCGTTATGGACACTGAGATATGCTATACAAGAATGATGTAATAATGTGAAATACTACTTGTGTGGTTGATTTCATTAACTATTACTGCTGCTGAAGTCACACATATGGATTATATAATAAATAATTAATCATGCAATCTGACAACAATAAACAAAATTTGGAAGTACCGAAACTTCTTAAATTATTCTAACTTTTAGTCTAGAGCTAGACAATTTGAGAGAGCATGGAGTCCTCATCCCCTCTACCAACTGAGCCCATTTTCCAAGCTTAGCAGGATCACAACTTGCGATACTTTACTAGTATTCTTGTGATGGATAATGTATGGGTTTGGAGTGATGGTTTTATTTCCTCATCGTATTTTTCTGTTTTTGTGGAAGGCAGATTCCTTTTTCATGTGTTTGATGGATTCCAGTTTCCACACCCATAACGTAGCTTTTTGGTCTGAGTCCGAATGAGATATTTTTGTTTTCCAACCTCCTGAATCATATAATTGGATCTCATTCATTGTCAGTTTGGTTTAGTTTTCTCTTATTATTGTGATAGGAATAGCATCAAAGGTATATTAAGGGTATGTTACTAATTAGTGGAGTAGTTTGTTAGGGAAGTTGGTTATAAATAGAGGGAATGGGGAGTGGAGAAGATAAACAATATTTGGGGAGTGAATTAGGACTTGAGAGTTATCTCATGATTGAGCAGGTTCAAGTAGTTTATCTTGTATTTTCATTATTGTTGATCTTTCAATGTATTCGGTTCTATGGCACCATCATGTTGATGTCAACTATATTGTGTACTGCATCTTCTTGTAGACTGATCCATAATTTTTCACATGGAAGCAGGATCTGTCAAGGATGCAGTGGTGGGTGAGGAGCGGATTGCTCAATATCTTCTGGCTGTTCTGAATTCTCGAAGGACTCCTTTCCATTGGAGGAGACATTTGAATAACAGAAGAGTGGAAGGTATTCGATATGAACCAGAGGAAAGGCACAAATTTAATCTTAATGACCTCCAGCCAAAGAGGAGGGCTCCTCCAAATAAGTCTGATGTGGTCTATGTTGAGGTAAGGAAAGAATTTCTTATTAGACTGATCAACTCCTAGAGTGTCTTTGGCTTCCAATGCTCCATGGGATCTTAATGAATAGTAGTTCACAATGGGAAGGAGAGAATTCCAGGTCTAGATAGT

mRNA sequence

ATGTCTAAAACCCCAAACCTCCGTCGTCGTCGGAGAGAACAAGAAATGAGAGGGATCACCGGAGTCGTGAAGAAGGCTCTTGGAGACATGGAGTTCACTGCCGGCGGTGGAGCCATCAATTGGTTCCCCGGCCACATGGCTGCAGCCACTCGTGCCATTCGTCATAGACTGAAGCTCGCGGACATGGTCATCGAGGTCAGGGATTCCCGAATTCCCTTGTCCTCGGCCAATCAAGACCTCCAGCCTCATCTCGCTTCCAAACGCCGCGTCATTGCCCTCAACAAGAAAGATTTGGCTAACCCTAATATCATGAATAAATGGGTTAACTTTTTTGACTCATGCAATCAAGATTGCGTACCAATTAACGCTCACAGTAAGAGTTCTGTTCGGAAGCTTCTCGAGCTTGTGGAATTTAAACTGAAGGAAGCAATTTCAAGGGAACCTACTCTTCTTGTTATGGTCGTTGGTGTTCCGAATGTTGGGAAGTCGGCTTTAATTAATTCAATCCATCAAATTGCTTCTGAACGCTTTCCAGTGCAGGAGAAAAGGAAGCGAGCTACTGTTGGTCCCTTGCCTGGGGTTACTCAAGATATAGCTGGCTACAAGATTGCTCATCAACCTAGCATATATGTTCTAGACACTCCTGGTGTATTAGTTCCAAGTATCCAAGATATCGAGACAGGGTTAAAACTAGCACTTGCAGGATCTGTCAAGGATGCAGTGGTGGGTGAGGAGCGGATTGCTCAATATCTTCTGGCTGTTCTGAATTCTCGAAGGACTCCTTTCCATTGGAGGAGACATTTGAATAACAGAAGAGTGGAAGGTATTCGATATGAACCAGAGGAAAGGCACAAATTTAATCTTAATGACCTCCAGCCAAAGAGGAGGGCTCCTCCAAATAAGTCTGATGTGGTCTATGTTGAGGTAAGGAAAGAATTTCTTATTAGACTGATCAACTCCTAG

Coding sequence (CDS)

ATGTCTAAAACCCCAAACCTCCGTCGTCGTCGGAGAGAACAAGAAATGAGAGGGATCACCGGAGTCGTGAAGAAGGCTCTTGGAGACATGGAGTTCACTGCCGGCGGTGGAGCCATCAATTGGTTCCCCGGCCACATGGCTGCAGCCACTCGTGCCATTCGTCATAGACTGAAGCTCGCGGACATGGTCATCGAGGTCAGGGATTCCCGAATTCCCTTGTCCTCGGCCAATCAAGACCTCCAGCCTCATCTCGCTTCCAAACGCCGCGTCATTGCCCTCAACAAGAAAGATTTGGCTAACCCTAATATCATGAATAAATGGGTTAACTTTTTTGACTCATGCAATCAAGATTGCGTACCAATTAACGCTCACAGTAAGAGTTCTGTTCGGAAGCTTCTCGAGCTTGTGGAATTTAAACTGAAGGAAGCAATTTCAAGGGAACCTACTCTTCTTGTTATGGTCGTTGGTGTTCCGAATGTTGGGAAGTCGGCTTTAATTAATTCAATCCATCAAATTGCTTCTGAACGCTTTCCAGTGCAGGAGAAAAGGAAGCGAGCTACTGTTGGTCCCTTGCCTGGGGTTACTCAAGATATAGCTGGCTACAAGATTGCTCATCAACCTAGCATATATGTTCTAGACACTCCTGGTGTATTAGTTCCAAGTATCCAAGATATCGAGACAGGGTTAAAACTAGCACTTGCAGGATCTGTCAAGGATGCAGTGGTGGGTGAGGAGCGGATTGCTCAATATCTTCTGGCTGTTCTGAATTCTCGAAGGACTCCTTTCCATTGGAGGAGACATTTGAATAACAGAAGAGTGGAAGGTATTCGATATGAACCAGAGGAAAGGCACAAATTTAATCTTAATGACCTCCAGCCAAAGAGGAGGGCTCCTCCAAATAAGTCTGATGTGGTCTATGTTGAGGTAAGGAAAGAATTTCTTATTAGACTGATCAACTCCTAG

Protein sequence

MSKTPNLRRRRREQEMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLELVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPGVTQDIAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDAVVGEERIAQYLLAVLNSRRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPNKSDVVYVEVRKEFLIRLINS*
Homology
[Close]
BLAST of Csa4G168980 vs. Swiss-Prot
Match: SIN2_ARATH (Short integuments 2, mitochondrial OS=Arabidopsis thaliana GN=SIN2 PE=1 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 2.8e-110
Identity = 208/305 (68.20%), Postives = 241/305 (79.02%), Query Frame = 1 

Query: 22  VVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDLQ 81
           V K  +G M F    G INWFPGHMAAATRAIR+RLKL+D+VIEVRD+RIPLSSAN+DLQ
Sbjct: 9   VKKGLIGGMSFAKDAGKINWFPGHMAAATRAIRNRLKLSDLVIEVRDARIPLSSANEDLQ 68

Query: 82  PHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLELVEFKLK 141
             +++KRR+IALNKKDLANPN++NKW   F+S  QDC+ INAHS+SSV KLL+LVE KLK
Sbjct: 69  SQMSAKRRIIALNKKDLANPNVLNKWTRHFESSKQDCIAINAHSRSSVMKLLDLVELKLK 128

Query: 142 EAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPGVTQDIAGY 201
           E I+REPTLLVMVVGVPNVGKSALINSIHQIA+ RFPVQE+ KRATVGPLPGVTQDIAG+
Sbjct: 129 EVIAREPTLLVMVVGVPNVGKSALINSIHQIAAARFPVQERLKRATVGPLPGVTQDIAGF 188

Query: 202 KIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDAVVGEERIAQYLLAVLNSRRTP 261
           KIAH+PSIYVLD+PGVLVPSI DIETGLKLAL+GSVKD+VVGEERIAQY LA+LN R TP
Sbjct: 189 KIAHRPSIYVLDSPGVLVPSIPDIETGLKLALSGSVKDSVVGEERIAQYFLAILNIRGTP 248

Query: 262 FHWRRHLNNRRVEGIRYEPE----ERHKFNLNDLQPKRRAPPNKSDVVYV-----EVRKE 318
            HW+       VEGI   P     ++  +NL DL+ +R   P+ S + YV     EV++ 
Sbjct: 249 LHWK-----YLVEGINEGPHADCIDKPSYNLKDLRHQRTKQPDSSALHYVGDMISEVQRS 308

[Close]
BLAST of Csa4G168980 vs. Swiss-Prot
Match: DGP2_ARATH (DAR GTPase 2, mitochondrial OS=Arabidopsis thaliana GN=DGP2 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.1e-42
Identity = 106/278 (38.13%), Postives = 161/278 (57.91%), Query Frame = 1 

Query: 41  WFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDLQPH--LASKRRVIALNKKDL 100
           W+  HMAAA RAI  R+ L D V+E+RD+RIPLSS  + L+    L SKR +I LNK +L
Sbjct: 28  WYGPHMAAAVRAISERIPLVDFVLEIRDARIPLSSEYELLRKFSPLPSKR-IIVLNKMEL 87

Query: 101 ANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLELVEFKLKE---AISREPTLLVMVV 160
           A+P  + K +++F+  N     +N+H+K  V++LL  ++ +++E   A     T  +M++
Sbjct: 88  ADPLELKKCIDYFEERNYLSYAVNSHNKDCVKQLLNFLQSQVRELHKAGHSGHTTTMMLL 147

Query: 161 GVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPGVTQDIAGYKIAHQPSIYVLDTP 220
           G+PNVGKSAL NS+H I       + K K  TV   PG T+DI   KI   P++YVLDTP
Sbjct: 148 GIPNVGKSALSNSLHHIGRISAAEKGKLKHTTVSSQPGDTKDIMSLKIGSHPNVYVLDTP 207

Query: 221 GVLVPSIQDIETGLKLALAGSVKDAVVGEERIAQYLLAVLNSRRTPFHWRRHLNNRRV-E 280
           G+  P++ D E   KLAL G++ D +VGE ++A+  L +LNS      W +   ++ + E
Sbjct: 208 GIFPPNLYDAEICAKLALTGAIPDDIVGELKLARLFLTILNSSHEYKKWAKLCKSQDLTE 267

Query: 281 GIRYEPEERHKFNLNDLQPKRR-APPNKSDVVYVEVRK 312
            +  E  +      +D + KR+ A  +  D +  +VR+
Sbjct: 268 SLSDESSK------SDAKHKRQYATDHTQDFIVYDVRR 298

[Close]
BLAST of Csa4G168980 vs. Swiss-Prot
Match: MTG1_MOUSE (Mitochondrial ribosome-associated GTPase 1 OS=Mus musculus GN=Mtg1 PE=1 SV=2)

HSP 1 Score: 154.5 bits (389), Expect = 2.0e-36
Identity = 99/249 (39.76%), Postives = 132/249 (53.01%), Query Frame = 1 

Query: 21  GVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDL 80
           G V+ A  +     G     WFPGHMA   + ++  LK  D VIEV D+RIP S  N   
Sbjct: 9   GAVRGAWRECFPLQGHDVARWFPGHMAKGLKKMQSSLKSVDCVIEVHDARIPFSGRNPLF 68

Query: 81  QPHLASKRRVIALNKKDLANPNIMNKWVN----------FFDSCNQDCVPINAHSKSSVR 140
           Q  L  K  ++ LNK DLA+     K V            F +C +D      + K  V 
Sbjct: 69  QELLGLKPHLLVLNKMDLADLTEQQKIVQRLEEKGLSNVLFTNCVKD-----ENIKQIVP 128

Query: 141 KLLELVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEKR--KRATV 200
           K++EL+    +   +  P   +MVVGVPNVGKS+LINS+ +        Q  R  K A V
Sbjct: 129 KVMELIRCSYRYHRAETPEYCIMVVGVPNVGKSSLINSLRR--------QHLRTGKAARV 188

Query: 201 GPLPGVTQDIAG-YKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDAVVGEERI 257
           G  PG+T+ +    ++  +P +++LDTPGVL P I+ +ETGLKLAL G+V D +VGEE +
Sbjct: 189 GGEPGITRAVTSRIQVCERPLVFLLDTPGVLAPRIESVETGLKLALCGTVLDHLVGEETM 244

[Close]
BLAST of Csa4G168980 vs. Swiss-Prot
Match: RBGA_ANOFW (Ribosome biogenesis GTPase A OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rbgA PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.2e-35
Identity = 83/225 (36.89%), Postives = 132/225 (58.67%), Query Frame = 1 

Query: 39  INWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDLQPHLASKRRVIALNKKDL 98
           I WFPGHMA A R +  +LKL D+V E+ D+RIP+SS N  +   +A+K R+I LNK D+
Sbjct: 6   IQWFPGHMAKAKREVTEKLKLIDIVFELVDARIPMSSRNPLIDEIVANKPRIILLNKADM 65

Query: 99  ANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLELVEFKLK--------EAISREPTL 158
           A+P++  +WV+FF +   D + I++ S + V++++ + + KL+        + + R   +
Sbjct: 66  ADPDVTKQWVDFFAAQQIDAIAIDSQSGTGVKQMVAVAKEKLRSKFEKMMAKGMKRPRAM 125

Query: 159 LVMVVGVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPGVTQDIAGYKIAHQPSIY 218
             ++VG+PNVGKS LIN   ++A +          A  G  PGVT+     K+  +  + 
Sbjct: 126 RALIVGIPNVGKSTLIN---RLAGKHI--------AKTGDTPGVTKAQQWIKVGKE--LE 185

Query: 219 VLDTPGVLVPSIQDIETGLKLALAGSVKDAVVGEERIAQYLLAVL 256
           +LDTPG+L P  +D E G KLA  G++KD ++  + +A Y L  L
Sbjct: 186 LLDTPGILWPKFEDEEVGYKLATTGAIKDTILNLQDVAVYALRFL 217

[Close]
BLAST of Csa4G168980 vs. Swiss-Prot
Match: MTG1_HUMAN (Mitochondrial ribosome-associated GTPase 1 OS=Homo sapiens GN=MTG1 PE=1 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 3.2e-34
Identity = 90/231 (38.96%), Postives = 130/231 (56.28%), Query Frame = 1 

Query: 35  GGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDLQPHLASKRRVIALN 94
           G     WFPGHMA   + ++  LKL D +IEV D+RIPLS  N   Q  L  K  ++ LN
Sbjct: 24  GRDVARWFPGHMAKGLKKMQSSLKLVDCIIEVHDARIPLSGRNPLFQETLGLKPHLLVLN 83

Query: 95  KKDLANPNIMNKWVNFFDSCN-QDCVPINAHSKSSVRKLLELVEFKLKEA--ISREPTL- 154
           K DLA+     K +   +    ++ +  N     +V++++ +V   +  +    R+  L 
Sbjct: 84  KMDLADLTEQQKIMQHLEGEGLKNVIFTNCVKDENVKQIIPMVTELIGRSHRYHRKENLE 143

Query: 155 -LVMVVGVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPGVTQDIAG-YKIAHQPS 214
             +MV+GVPNVGKS+LINS+      R     K K   VG  PG+T+ +    +++ +P 
Sbjct: 144 YCIMVIGVPNVGKSSLINSL------RRQHLRKGKATRVGGEPGITRAVMSKIQVSERPL 203

Query: 215 IYVLDTPGVLVPSIQDIETGLKLALAGSVKDAVVGEERIAQYLLAVLNSRR 260
           +++LDTPGVL P I+ +ETGLKLAL G+V D +VGEE +A YLL  LN  +
Sbjct: 204 MFLLDTPGVLAPRIESVETGLKLALCGTVLDHLVGEETMADYLLYTLNKHQ 248

[Close]
BLAST of Csa4G168980 vs. TrEMBL
Match: A0A0A0L141_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G168980 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 7.4e-179
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 1 

Query: 1   MSKTPNLRRRRREQEMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLA 60
           MSKTPNLRRRRREQEMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLA
Sbjct: 1   MSKTPNLRRRRREQEMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLA 60

Query: 61  DMVIEVRDSRIPLSSANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVP 120
           DMVIEVRDSRIPLSSANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVP
Sbjct: 61  DMVIEVRDSRIPLSSANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVP 120

Query: 121 INAHSKSSVRKLLELVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQ 180
           INAHSKSSVRKLLELVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQ
Sbjct: 121 INAHSKSSVRKLLELVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQ 180

Query: 181 EKRKRATVGPLPGVTQDIAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDA 240
           EKRKRATVGPLPGVTQDIAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDA
Sbjct: 181 EKRKRATVGPLPGVTQDIAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDA 240

Query: 241 VVGEERIAQYLLAVLNSRRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPN 300
           VVGEERIAQYLLAVLNSRRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPN
Sbjct: 241 VVGEERIAQYLLAVLNSRRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPN 300

Query: 301 KSDVVYVEVRKEFLIRLINS 321
           KSDVVYVEVRKEFLIRLINS
Sbjct: 301 KSDVVYVEVRKEFLIRLINS 320

[Close]
BLAST of Csa4G168980 vs. TrEMBL
Match: A0A151TTU8_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_009722 PE=4 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 1.0e-135
Identity = 241/295 (81.69%), Postives = 273/295 (92.54%), Query Frame = 1 

Query: 16  MRGITGVVKKALG--DMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPL 75
           MRG+ G+VKK LG  DM F AGGGAINWFPGHMAAA RAIRHRLKL+D+VIEVRD+RIPL
Sbjct: 1   MRGLKGLVKKGLGLGDMAFNAGGGAINWFPGHMAAAARAIRHRLKLSDLVIEVRDARIPL 60

Query: 76  SSANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLL 135
           SSAN DLQPHL++KRRV+ALNKKDLANPNIM+KW ++F++C QDC+PINAHSKSSV+KLL
Sbjct: 61  SSANPDLQPHLSAKRRVVALNKKDLANPNIMHKWTHYFETCKQDCIPINAHSKSSVKKLL 120

Query: 136 ELVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPG 195
           ELVEFKLKE ISREPTLLVMVVGVPNVGKSALINSIHQIA  RFPVQEK+KRATVGPLPG
Sbjct: 121 ELVEFKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIAQSRFPVQEKKKRATVGPLPG 180

Query: 196 VTQDIAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDAVVGEERIAQYLLA 255
           VTQDIAG+KIAH+PSIYVLDTPGVLVPSI DIETGLKLALAGSVKD+VVGEERIAQYLLA
Sbjct: 181 VTQDIAGFKIAHKPSIYVLDTPGVLVPSISDIETGLKLALAGSVKDSVVGEERIAQYLLA 240

Query: 256 VLNSRRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPNKSDVVYVE 309
           VL++R TP HW ++LNNRR++GI YE EE H+++L +L+PKRR PPN+SD+VYVE
Sbjct: 241 VLDTRGTPLHW-KYLNNRRIDGIEYEAEENHEYSLKNLKPKRRNPPNRSDLVYVE 294

[Close]
BLAST of Csa4G168980 vs. TrEMBL
Match: V7CXT9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G130500g PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 1.4e-132
Identity = 236/295 (80.00%), Postives = 268/295 (90.85%), Query Frame = 1 

Query: 16  MRGITGVVKKALG--DMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPL 75
           M G+  ++KK LG  DM F AGGGAI+WFPGHMAAATRAIRHRLKL+D+VIEVRD+RIPL
Sbjct: 1   MSGLKELLKKGLGLGDMAFNAGGGAISWFPGHMAAATRAIRHRLKLSDLVIEVRDARIPL 60

Query: 76  SSANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLL 135
           SSAN DLQPHL++KRRV+ALNKKDLANPNIM+KW ++F++C QDC+PINAHSKSSV KLL
Sbjct: 61  SSANADLQPHLSAKRRVVALNKKDLANPNIMHKWTHYFETCKQDCIPINAHSKSSVNKLL 120

Query: 136 ELVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPG 195
           ELVEFKLKE I REPTLLVMVVGVPNVGKSALINSIHQIA  RFP QEK KRA VGPLPG
Sbjct: 121 ELVEFKLKEVICREPTLLVMVVGVPNVGKSALINSIHQIAKSRFPAQEKMKRAAVGPLPG 180

Query: 196 VTQDIAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDAVVGEERIAQYLLA 255
           VTQDIAG+KIAH+PSIYVLD+PGVLVPSI DIETGLKLALAGSVKD+VVGEERIAQYLLA
Sbjct: 181 VTQDIAGFKIAHKPSIYVLDSPGVLVPSISDIETGLKLALAGSVKDSVVGEERIAQYLLA 240

Query: 256 VLNSRRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPNKSDVVYVE 309
           VLN+R TP HW +HLNNRR++GI+YE EE H+++L +L+PKRR PPN+SD+VYVE
Sbjct: 241 VLNTRGTPLHW-KHLNNRRIDGIKYEAEENHEYSLKNLKPKRRNPPNRSDLVYVE 294

[Close]
BLAST of Csa4G168980 vs. TrEMBL
Match: B9H9S8_POPTR (GTP-binding family protein OS=Populus trichocarpa GN=POPTR_0006s04750g PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 6.8e-132
Identity = 236/291 (81.10%), Postives = 265/291 (91.07%), Query Frame = 1 

Query: 18  GITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSAN 77
           G+ G+VKK +G+M F AGGGAINWFPGHMAAATRAIR RLKLAD+VIEVRDSRIPLSS N
Sbjct: 4   GLKGIVKKGIGEMGFNAGGGAINWFPGHMAAATRAIRDRLKLADLVIEVRDSRIPLSSTN 63

Query: 78  QDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLELVE 137
           +DLQP LA+KRRVIALNKKDLANPNIM+KW+ +FDSC QDC+PI+AHSKSSV+KLLE+VE
Sbjct: 64  EDLQPQLAAKRRVIALNKKDLANPNIMHKWIRYFDSCKQDCIPISAHSKSSVQKLLEVVE 123

Query: 138 FKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPGVTQD 197
           FKLKE ISREPTLLVMVVGVPNVGKSALINSIHQIA  RF VQ K+KRATVGPLPGVTQD
Sbjct: 124 FKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIALSRFAVQGKKKRATVGPLPGVTQD 183

Query: 198 IAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDAVVGEERIAQYLLAVLNS 257
           IAGYKIAH+PSIYVLDTPGVLVPSI DIETGLKL+LAGSVKD+VVGEERIA+YLLAVLN+
Sbjct: 184 IAGYKIAHKPSIYVLDTPGVLVPSIPDIETGLKLSLAGSVKDSVVGEERIARYLLAVLNT 243

Query: 258 RRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPNKSDVVYVE 309
           R TP HW +H NNR+++GIRYE EE+HK++  DL+P  R PP+ SDVVYVE
Sbjct: 244 RGTPLHW-KHWNNRKMDGIRYESEEKHKYDPKDLRPNMRKPPSVSDVVYVE 293

[Close]
BLAST of Csa4G168980 vs. TrEMBL
Match: B9T5C1_RICCO (GTP binding protein, putative OS=Ricinus communis GN=RCOM_0770010 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 1.5e-131
Identity = 236/292 (80.82%), Postives = 263/292 (90.07%), Query Frame = 1 

Query: 17  RGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSA 76
           RG+  +VKK LG+M F + GG INWFPGHMAAATRAIR RLKLAD+VIEVRDSRIPLSSA
Sbjct: 3   RGLREIVKKGLGEMSFNSEGGVINWFPGHMAAATRAIRSRLKLADLVIEVRDSRIPLSSA 62

Query: 77  NQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLELV 136
           N DLQPHL SKRRVIALNKKDLAN N+M+KWV++F+SC QD +P+N+HSKSSV KLLELV
Sbjct: 63  NNDLQPHLNSKRRVIALNKKDLANANVMHKWVHYFNSCKQDSIPVNSHSKSSVMKLLELV 122

Query: 137 EFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPGVTQ 196
           E KLKE ISREPTLLVMVVGVPNVGKSALINSIHQIAS RFPVQEK+KRATVGPLPGVTQ
Sbjct: 123 ELKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIASSRFPVQEKKKRATVGPLPGVTQ 182

Query: 197 DIAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDAVVGEERIAQYLLAVLN 256
           DIAGYKIAHQPSIYVLDTPGVLVPSI DIETGLKLALAGSVKD+ VGEERIAQYLLAVLN
Sbjct: 183 DIAGYKIAHQPSIYVLDTPGVLVPSIPDIETGLKLALAGSVKDSAVGEERIAQYLLAVLN 242

Query: 257 SRRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPNKSDVVYVE 309
           +R TP HW RH NNR+++GI+Y  +++H+ NL DL+PKR+ PPN SDV+YVE
Sbjct: 243 TRGTPLHW-RHWNNRKMDGIKYNSQDKHECNLKDLRPKRKRPPNLSDVLYVE 293

[Close]
BLAST of Csa4G168980 vs. TAIR10
Match: AT2G41670.1 (AT2G41670.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 399.8 bits (1026), Expect = 1.6e-111
Identity = 208/305 (68.20%), Postives = 241/305 (79.02%), Query Frame = 1 

Query: 22  VVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDLQ 81
           V K  +G M F    G INWFPGHMAAATRAIR+RLKL+D+VIEVRD+RIPLSSAN+DLQ
Sbjct: 9   VKKGLIGGMSFAKDAGKINWFPGHMAAATRAIRNRLKLSDLVIEVRDARIPLSSANEDLQ 68

Query: 82  PHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLELVEFKLK 141
             +++KRR+IALNKKDLANPN++NKW   F+S  QDC+ INAHS+SSV KLL+LVE KLK
Sbjct: 69  SQMSAKRRIIALNKKDLANPNVLNKWTRHFESSKQDCIAINAHSRSSVMKLLDLVELKLK 128

Query: 142 EAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPGVTQDIAGY 201
           E I+REPTLLVMVVGVPNVGKSALINSIHQIA+ RFPVQE+ KRATVGPLPGVTQDIAG+
Sbjct: 129 EVIAREPTLLVMVVGVPNVGKSALINSIHQIAAARFPVQERLKRATVGPLPGVTQDIAGF 188

Query: 202 KIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDAVVGEERIAQYLLAVLNSRRTP 261
           KIAH+PSIYVLD+PGVLVPSI DIETGLKLAL+GSVKD+VVGEERIAQY LA+LN R TP
Sbjct: 189 KIAHRPSIYVLDSPGVLVPSIPDIETGLKLALSGSVKDSVVGEERIAQYFLAILNIRGTP 248

Query: 262 FHWRRHLNNRRVEGIRYEPE----ERHKFNLNDLQPKRRAPPNKSDVVYV-----EVRKE 318
            HW+       VEGI   P     ++  +NL DL+ +R   P+ S + YV     EV++ 
Sbjct: 249 LHWK-----YLVEGINEGPHADCIDKPSYNLKDLRHQRTKQPDSSALHYVGDMISEVQRS 308

[Close]
BLAST of Csa4G168980 vs. TAIR10
Match: AT4G10650.1 (AT4G10650.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 175.3 bits (443), Expect = 6.3e-44
Identity = 106/278 (38.13%), Postives = 161/278 (57.91%), Query Frame = 1 

Query: 41  WFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDLQPH--LASKRRVIALNKKDL 100
           W+  HMAAA RAI  R+ L D V+E+RD+RIPLSS  + L+    L SKR +I LNK +L
Sbjct: 28  WYGPHMAAAVRAISERIPLVDFVLEIRDARIPLSSEYELLRKFSPLPSKR-IIVLNKMEL 87

Query: 101 ANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLELVEFKLKE---AISREPTLLVMVV 160
           A+P  + K +++F+  N     +N+H+K  V++LL  ++ +++E   A     T  +M++
Sbjct: 88  ADPLELKKCIDYFEERNYLSYAVNSHNKDCVKQLLNFLQSQVRELHKAGHSGHTTTMMLL 147

Query: 161 GVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPGVTQDIAGYKIAHQPSIYVLDTP 220
           G+PNVGKSAL NS+H I       + K K  TV   PG T+DI   KI   P++YVLDTP
Sbjct: 148 GIPNVGKSALSNSLHHIGRISAAEKGKLKHTTVSSQPGDTKDIMSLKIGSHPNVYVLDTP 207

Query: 221 GVLVPSIQDIETGLKLALAGSVKDAVVGEERIAQYLLAVLNSRRTPFHWRRHLNNRRV-E 280
           G+  P++ D E   KLAL G++ D +VGE ++A+  L +LNS      W +   ++ + E
Sbjct: 208 GIFPPNLYDAEICAKLALTGAIPDDIVGELKLARLFLTILNSSHEYKKWAKLCKSQDLTE 267

Query: 281 GIRYEPEERHKFNLNDLQPKRR-APPNKSDVVYVEVRK 312
            +  E  +      +D + KR+ A  +  D +  +VR+
Sbjct: 268 SLSDESSK------SDAKHKRQYATDHTQDFIVYDVRR 298

[Close]
BLAST of Csa4G168980 vs. TAIR10
Match: AT4G02790.1 (AT4G02790.1 GTP-binding family protein)

HSP 1 Score: 108.6 bits (270), Expect = 7.2e-24
Identity = 72/240 (30.00%), Postives = 116/240 (48.33%), Query Frame = 1 

Query: 39  INWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDLQPHLASKRRVIALNKKDL 98
           + W+PGH+    + +R +LKL D+VIEVRD+RIPLS+ +  +   L +++R++ LN++D+
Sbjct: 96  VQWYPGHIMKTEKELREQLKLMDVVIEVRDARIPLSTTHPKMDAWLGNRKRILVLNREDM 155

Query: 99  ANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLEL-------VEFKLKEAISREPTLL 158
            + +  N W  +F       +  N        KL  L       V  K +E      ++ 
Sbjct: 156 ISNDDRNDWARYFAKQGIKVIFTNGKLGMGAMKLGRLAKSLAGDVNGKRREKGLLPRSVR 215

Query: 159 VMVVGVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPGVTQDIAGYKIAHQPSIYV 218
             ++G PNVGKS+LIN +            KRK     P PGVT+++   K+     + +
Sbjct: 216 AGIIGYPNVGKSSLINRL-----------LKRKICAAAPRPGVTREMKWVKLG--KDLDL 275

Query: 219 LDTPGVLVPSIQDIETGLKLALAGSVKDAVVGEERIAQYLLAVLNSRRTPFHWRRHLNNR 272
           LD+PG+L   I D    +KLA+   + +       +A  L+ +L   R P    + L NR
Sbjct: 276 LDSPGMLPMRIDDQAAAIKLAICDDIGEKAYDFTDVAGILVQML--ARIPEVGAKALYNR 320

[Close]
BLAST of Csa4G168980 vs. NCBI nr
Match: gi|700198698|gb|KGN53856.1| (hypothetical protein Csa_4G168980 [Cucumis sativus])

HSP 1 Score: 634.4 bits (1635), Expect = 1.1e-178
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 1 

Query: 1   MSKTPNLRRRRREQEMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLA 60
           MSKTPNLRRRRREQEMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLA
Sbjct: 1   MSKTPNLRRRRREQEMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLA 60

Query: 61  DMVIEVRDSRIPLSSANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVP 120
           DMVIEVRDSRIPLSSANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVP
Sbjct: 61  DMVIEVRDSRIPLSSANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVP 120

Query: 121 INAHSKSSVRKLLELVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQ 180
           INAHSKSSVRKLLELVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQ
Sbjct: 121 INAHSKSSVRKLLELVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQ 180

Query: 181 EKRKRATVGPLPGVTQDIAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDA 240
           EKRKRATVGPLPGVTQDIAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDA
Sbjct: 181 EKRKRATVGPLPGVTQDIAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDA 240

Query: 241 VVGEERIAQYLLAVLNSRRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPN 300
           VVGEERIAQYLLAVLNSRRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPN
Sbjct: 241 VVGEERIAQYLLAVLNSRRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPN 300

Query: 301 KSDVVYVEVRKEFLIRLINS 321
           KSDVVYVEVRKEFLIRLINS
Sbjct: 301 KSDVVYVEVRKEFLIRLINS 320

[Close]
BLAST of Csa4G168980 vs. NCBI nr
Match: gi|778692268|ref|XP_004149387.2| (PREDICTED: mitochondrial ribosome-associated GTPase 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 612.8 bits (1579), Expect = 3.3e-172
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 1 

Query: 1   MSKTPNLRRRRREQEMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLA 60
           MSKTPNLRRRRREQEMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLA
Sbjct: 1   MSKTPNLRRRRREQEMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLA 60

Query: 61  DMVIEVRDSRIPLSSANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVP 120
           DMVIEVRDSRIPLSSANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVP
Sbjct: 61  DMVIEVRDSRIPLSSANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVP 120

Query: 121 INAHSKSSVRKLLELVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQ 180
           INAHSKSSVRKLLELVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQ
Sbjct: 121 INAHSKSSVRKLLELVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQ 180

Query: 181 EKRKRATVGPLPGVTQDIAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDA 240
           EKRKRATVGPLPGVTQDIAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDA
Sbjct: 181 EKRKRATVGPLPGVTQDIAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDA 240

Query: 241 VVGEERIAQYLLAVLNSRRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPN 300
           VVGEERIAQYLLAVLNSRRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPN
Sbjct: 241 VVGEERIAQYLLAVLNSRRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPN 300

Query: 301 KSDVVYVE 309
           KSDVVYVE
Sbjct: 301 KSDVVYVE 308

[Close]
BLAST of Csa4G168980 vs. NCBI nr
Match: gi|659121629|ref|XP_008460756.1| (PREDICTED: mitochondrial GTPase 1 isoform X1 [Cucumis melo])

HSP 1 Score: 556.2 bits (1432), Expect = 3.7e-155
Identity = 278/293 (94.88%), Postives = 285/293 (97.27%), Query Frame = 1 

Query: 16  MRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSS 75
           MRGI GV+KKALGDMEFTAGGGAINWFPGHMAAA RAIRHRLKLADMVIEVRDSRIPLSS
Sbjct: 1   MRGINGVMKKALGDMEFTAGGGAINWFPGHMAAAIRAIRHRLKLADMVIEVRDSRIPLSS 60

Query: 76  ANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLEL 135
           ANQDLQPHL+SKRRVIALNKKDLAN NIMNKWV+FFDSCNQDC+PINAHSKSSVRKLLEL
Sbjct: 61  ANQDLQPHLSSKRRVIALNKKDLANSNIMNKWVDFFDSCNQDCIPINAHSKSSVRKLLEL 120

Query: 136 VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPGVT 195
           VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPGVT
Sbjct: 121 VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPGVT 180

Query: 196 QDIAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDAVVGEERIAQYLLAVL 255
           QDIAGYKIAHQPSIYVLDTPGVLVPSIQD ETGLKLALAGSVKD VVGEERIAQYLLAVL
Sbjct: 181 QDIAGYKIAHQPSIYVLDTPGVLVPSIQDTETGLKLALAGSVKDEVVGEERIAQYLLAVL 240

Query: 256 NSRRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPNKSDVVYVE 309
           NSRRTP HWRRHLNNRR+EGI+YEPEERH+FNLNDLQPKRRA PNKSD VYVE
Sbjct: 241 NSRRTPLHWRRHLNNRRMEGIQYEPEERHRFNLNDLQPKRRALPNKSDAVYVE 293

[Close]
BLAST of Csa4G168980 vs. NCBI nr
Match: gi|1012359318|gb|KYP70502.1| (hypothetical protein KK1_009722 [Cajanus cajan])

HSP 1 Score: 491.1 bits (1263), Expect = 1.5e-135
Identity = 241/295 (81.69%), Postives = 273/295 (92.54%), Query Frame = 1 

Query: 16  MRGITGVVKKALG--DMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPL 75
           MRG+ G+VKK LG  DM F AGGGAINWFPGHMAAA RAIRHRLKL+D+VIEVRD+RIPL
Sbjct: 1   MRGLKGLVKKGLGLGDMAFNAGGGAINWFPGHMAAAARAIRHRLKLSDLVIEVRDARIPL 60

Query: 76  SSANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLL 135
           SSAN DLQPHL++KRRV+ALNKKDLANPNIM+KW ++F++C QDC+PINAHSKSSV+KLL
Sbjct: 61  SSANPDLQPHLSAKRRVVALNKKDLANPNIMHKWTHYFETCKQDCIPINAHSKSSVKKLL 120

Query: 136 ELVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPG 195
           ELVEFKLKE ISREPTLLVMVVGVPNVGKSALINSIHQIA  RFPVQEK+KRATVGPLPG
Sbjct: 121 ELVEFKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIAQSRFPVQEKKKRATVGPLPG 180

Query: 196 VTQDIAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDAVVGEERIAQYLLA 255
           VTQDIAG+KIAH+PSIYVLDTPGVLVPSI DIETGLKLALAGSVKD+VVGEERIAQYLLA
Sbjct: 181 VTQDIAGFKIAHKPSIYVLDTPGVLVPSISDIETGLKLALAGSVKDSVVGEERIAQYLLA 240

Query: 256 VLNSRRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPNKSDVVYVE 309
           VL++R TP HW ++LNNRR++GI YE EE H+++L +L+PKRR PPN+SD+VYVE
Sbjct: 241 VLDTRGTPLHW-KYLNNRRIDGIEYEAEENHEYSLKNLKPKRRNPPNRSDLVYVE 294

[Close]
BLAST of Csa4G168980 vs. NCBI nr
Match: gi|802729616|ref|XP_012086198.1| (PREDICTED: mitochondrial ribosome-associated GTPase 1-like [Jatropha curcas])

HSP 1 Score: 490.7 bits (1262), Expect = 1.9e-135
Identity = 243/293 (82.94%), Postives = 269/293 (91.81%), Query Frame = 1 

Query: 16  MRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSS 75
           M G+ G+VKK LG+M F AGGG INWFPGHMAAATRAIR+RLKLAD+VIEVRDSRIPLSS
Sbjct: 1   MGGLKGIVKKGLGEMAFNAGGGVINWFPGHMAAATRAIRNRLKLADLVIEVRDSRIPLSS 60

Query: 76  ANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLEL 135
           AN+DLQP L+SKRRVIALNKKDLANPNIM+KWV++FDSC  DC+PIN++SKSSV+KLLEL
Sbjct: 61  ANEDLQPQLSSKRRVIALNKKDLANPNIMHKWVHYFDSCKMDCIPINSNSKSSVQKLLEL 120

Query: 136 VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPGVT 195
           VEFKLKE ISREPTLLVMVVGVPNVGKSALINSIHQIA  RFPVQEK KRATVGPLPGVT
Sbjct: 121 VEFKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIAHSRFPVQEKMKRATVGPLPGVT 180

Query: 196 QDIAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDAVVGEERIAQYLLAVL 255
           QDIAGYKIAHQPSIYVLDTPGVLVPSI DIETGLKLALAGSVKD++VGEERIAQYLLAVL
Sbjct: 181 QDIAGYKIAHQPSIYVLDTPGVLVPSIPDIETGLKLALAGSVKDSIVGEERIAQYLLAVL 240

Query: 256 NSRRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPNKSDVVYVE 309
           N+R TP HW RH NNR++EGIRYE  ++H++NL DL+PKR+  PN SDV+YVE
Sbjct: 241 NTRGTPLHW-RHWNNRKMEGIRYESHDKHEYNLKDLRPKRKKLPNVSDVLYVE 292

The following BLAST results are available for this feature:
BLAST of Csa4G168980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SIN2_ARATH2.8e-11068.20Short integuments 2, mitochondrial OS=Arabidopsis thaliana GN=SIN2 PE=1 SV=1[more]
DGP2_ARATH1.1e-4238.13DAR GTPase 2, mitochondrial OS=Arabidopsis thaliana GN=DGP2 PE=3 SV=1[more]
MTG1_MOUSE2.0e-3639.76Mitochondrial ribosome-associated GTPase 1 OS=Mus musculus GN=Mtg1 PE=1 SV=2[more]
RBGA_ANOFW2.2e-3536.89Ribosome biogenesis GTPase A OS=Anoxybacillus flavithermus (strain DSM 21510 / W... [more]
MTG1_HUMAN3.2e-3438.96Mitochondrial ribosome-associated GTPase 1 OS=Homo sapiens GN=MTG1 PE=1 SV=2[more]
BLAST of Csa4G168980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L141_CUCSA7.4e-179100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G168980 PE=4 SV=1[more]
A0A151TTU8_CAJCA1.0e-13581.69Uncharacterized protein OS=Cajanus cajan GN=KK1_009722 PE=4 SV=1[more]
V7CXT9_PHAVU1.4e-13280.00Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G130500g PE=4 SV=1[more]
B9H9S8_POPTR6.8e-13281.10GTP-binding family protein OS=Populus trichocarpa GN=POPTR_0006s04750g PE=4 SV=1[more]
B9T5C1_RICCO1.5e-13180.82GTP binding protein, putative OS=Ricinus communis GN=RCOM_0770010 PE=4 SV=1[more]
BLAST of Csa4G168980 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G41670.11.6e-11168.20 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
AT4G10650.16.3e-4438.13 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
AT4G02790.17.2e-2430.00 GTP-binding family protein[more]
BLAST of Csa4G168980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198698|gb|KGN53856.1|1.1e-178100.00hypothetical protein Csa_4G168980 [Cucumis sativus][more]
gi|778692268|ref|XP_004149387.2|3.3e-172100.00PREDICTED: mitochondrial ribosome-associated GTPase 1 isoform X1 [Cucumis sativu... [more]
gi|659121629|ref|XP_008460756.1|3.7e-15594.88PREDICTED: mitochondrial GTPase 1 isoform X1 [Cucumis melo][more]
gi|1012359318|gb|KYP70502.1|1.5e-13581.69hypothetical protein KK1_009722 [Cajanus cajan][more]
gi|802729616|ref|XP_012086198.1|1.9e-13582.94PREDICTED: mitochondrial ribosome-associated GTPase 1-like [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR023179GTP-bd_ortho_bundle_sf
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005743 mitochondrial inner membrane
molecular_function GO:0005525 GTP binding
molecular_function GO:0052904 N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity
molecular_function GO:0052903 N1-acetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity
molecular_function GO:0052899 N(1),N(12)-diacetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity
molecular_function GO:0052902 spermidine:oxygen oxidoreductase (3-aminopropanal-forming) activity
molecular_function GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity
molecular_function GO:0003924 GTPase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU109701cucumber EST collection version 3.0transcribed_cluster
CU118140cucumber EST collection version 3.0transcribed_cluster
CU142741cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G168980.1Csa4G168980.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU109701CU109701transcribed_cluster
CU118140CU118140transcribed_cluster
CU142741CU142741transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 152..257
score: 2.9
IPR023179GTP-binding protein, orthogonal bundle domainGENE3DG3DSA:1.10.1580.10coord: 222..268
score: 9.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 53..219
score: 7.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 45..233
score: 8.54
NoneNo IPR availablePANTHERPTHR11089GTP-BINDING PROTEIN-RELATEDcoord: 29..269
score: 6.3