Csa4G113160 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G113160
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 7267141 .. 7267495 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGATTGACATGAGCACAAACTCAGAAATCCCAAAGGGGAAATCGGCATTTAATTCCTGTGTATGAAACCATGGGAATGAATGAATTATCATACCTAAATATAGAATAAAGTTCACCTTTTTCTTATCAAAATGGTCAGACAATGCCACCAGTTCATCCCAGAAATCCAGACACCTGGTTCATGAACTTCACATAAACTTAAAGAAAAAAAAAAGGGGGGGGAATTTGGCCATATAGTATGAATTTTTATTCACAACTTGAAGTTCTCTTCAGCATGTTTGGAAGATACAAGCTGCAGCAAGTTCAGAAGCTTCAACAGAACAAACAGGAAGAAGCTTTTTATCCATACTAA

mRNA sequence

ATGGTGATTGACATGAGCACAAACTCAGAAATCCCAAAGGGGAAATCGGCATTTAATTCCTGTACAATGCCACCAGTTCATCCCAGAAATCCAGACACCTGCATGTTTGGAAGATACAAGCTGCAGCAAGTTCAGAAGCTTCAACAGAACAAACAGGAAGAAGCTTTTTATCCATACTAA

Coding sequence (CDS)

ATGGTGATTGACATGAGCACAAACTCAGAAATCCCAAAGGGGAAATCGGCATTTAATTCCTGTACAATGCCACCAGTTCATCCCAGAAATCCAGACACCTGCATGTTTGGAAGATACAAGCTGCAGCAAGTTCAGAAGCTTCAACAGAACAAACAGGAAGAAGCTTTTTATCCATACTAA

Protein sequence

MVIDMSTNSEIPKGKSAFNSCTMPPVHPRNPDTCMFGRYKLQQVQKLQQNKQEEAFYPY*
Homology
[Close]
BLAST of Csa4G113160 vs. TrEMBL
Match: A0A0A0KVY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G113160 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.5e-27
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

Query: 1  MVIDMSTNSEIPKGKSAFNSCTMPPVHPRNPDTCMFGRYKLQQVQKLQQNKQEEAFYPY 60
          MVIDMSTNSEIPKGKSAFNSCTMPPVHPRNPDTCMFGRYKLQQVQKLQQNKQEEAFYPY
Sbjct: 1  MVIDMSTNSEIPKGKSAFNSCTMPPVHPRNPDTCMFGRYKLQQVQKLQQNKQEEAFYPY 59

[Close]
BLAST of Csa4G113160 vs. NCBI nr
Match: gi|700198575|gb|KGN53733.1| (hypothetical protein Csa_4G113160 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 3.6e-27
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

Query: 1  MVIDMSTNSEIPKGKSAFNSCTMPPVHPRNPDTCMFGRYKLQQVQKLQQNKQEEAFYPY 60
          MVIDMSTNSEIPKGKSAFNSCTMPPVHPRNPDTCMFGRYKLQQVQKLQQNKQEEAFYPY
Sbjct: 1  MVIDMSTNSEIPKGKSAFNSCTMPPVHPRNPDTCMFGRYKLQQVQKLQQNKQEEAFYPY 59

The following BLAST results are available for this feature:
BLAST of Csa4G113160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVY3_CUCSA2.5e-27100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G113160 PE=4 SV=1[more]
BLAST of Csa4G113160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198575|gb|KGN53733.1|3.6e-27100.00hypothetical protein Csa_4G113160 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G113160.1Csa4G113160.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G113160Cucumber (Gy14) v2cgybcuB165
Csa4G113160Melon (DHL92) v3.6.1cumedB302
Csa4G113160Silver-seed gourdcarcuB0406
Csa4G113160Watermelon (97103) v2cuwmbB272
Csa4G113160Wax gourdcuwgoB358
Csa4G113160Cucumber (Gy14) v1cgycuB556
Csa4G113160Cucurbita maxima (Rimu)cmacuB334
Csa4G113160Cucurbita maxima (Rimu)cmacuB718
Csa4G113160Cucurbita moschata (Rifu)cmocuB710
Csa4G113160Melon (DHL92) v3.5.1cumeB315
Csa4G113160Watermelon (Charleston Gray)cuwcgB272
Csa4G113160Watermelon (97103) v1cuwmB293
Csa4G113160Cucurbita pepo (Zucchini)cpecuB411
Csa4G113160Bottle gourd (USVL1VR-Ls)culsiB276