Csa4G109540 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G109540
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Ribonuclease t2, putative; contains IPR001568 (Ribonuclease T2-like)
Location	Chr4 : 7048996 .. 7051854 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAGCTTTCTAATTTCCATTTTTCCTTCTACTTAAAATGGCTTCTTTATCCATTAAAGCCAAGGCCATGGTGTTTGTTGTTGTTGTTCTTCTTCAGCTGCTGACGGTGGTGTTCGGGTTCTCTGCGGAGGCCCCAAGCAGCAGTGAGCAGAGGGAATTTGATTACTTTGTATTGGCTCTTCAATGGCCAGGTAGTTCTTGCAAAAACCCTGGCAAGTGTTGCCCATCCAACGCCTGCTGCCGTGGGTGAGTAGTTCTCCAAAATACATTGTAAACAAATGGGAACAAACCATCACAATTTACACAAGACAACAAAATAATAATTTTCATTACTGGATGCATGGATGTGTCTAATTTTGTTAATTAATTAGAAAAAGAATATTATTTTAAACCACAAAACCTTGAAAATATTTATATTATATAGTAAAACATATTAAGATATCCAATGTATATCATAAATTTAAAATATTTTCTTTTAGACTTTAGCCACATGCCAGTCTCTTGCCAAATAATTTCCTTTGGAGTTTTGTGTTTTTTTTTGTTTTTAACTTCTGAAAGCTAACATTTTTTTTTTCTTCTGTGTGTGCGTAGAGCTGAGTCCCCCACTGAATTTACAATCCGTAAGTGAAATTTAATTAATAAGCTCCTAAGCTTTGGAAGGTTGTCAATTTCATTAGTATTTTTGATTTGGATGTTTAACTCATTTTGTGTATATATGTTTAATACATTGTGATAGATGGATTGTGGCCTCAGTATAATGAGAAAGGATGGCCATCTTGTTGCACTGATGCAAGCTTTAATGAAAATGAGGTTCCTTAGCTTTCTCTCCATACACTTTTAATTTAAATTGTTTTTTTCCATCTTCAACTTCTCTCACGTATTACATGCTATTAAATTTTATGTTGATATATAGATATTTACATGTGCTTGTACATTTCACCTAATATATAAATGTTACATCAATTAATTTATTACAATATCATAGATATTGATGACATACAAAAATAGAAATATTGTTATAAATACCGAAACGTACAAAAAAAATTTAAAAGTATATAGCAAAATTTTAAACTATACACTTGCAGATTTTGAATTAATGGATTAATAAACCTTCCTACAGTTGAATATTTTTTAAATTATTGTTAGTTTTATTTTTAAATCTCCATCCACCTCGATATTGGATTTAAAATTGAAGTTTTCAAGTCACTACCATATTCTATACATATTGTAGGTTTTATTTCGTTGAATCTCTCTCCACACATATATATTCAAGAGAATATTTTGATATTTTGATATTATAGGTGAAAGAAGTGAATGATTAATCTTTGAAATGAAAATTTAAGTCTTATTTACTAAGCGACTCATGTTTGCAGATTAATATCTTGACAGAGGATATTCAAAAGTATTGGCCAACTTACAGATGTGGTACTACATCCACATGCCACCAGACGAAGGGATCATTTTGGGCACATGAGGTTCAAACTATTCACCTTTTACTCCTTTCCTTAAGAAGCTCACCAATATCAAAGTTTTGAGACTAACAAATTTTTTCTCTCTTTATTGCCATTACTAATATGATGTGGACCATTTGACATGTTACCCATTGCTATAGTATGGTGAGTTTCTTTTCTTTTTTCTTTTGGAATTCGATATGTGTGTGTGTGTTTTTTAAAAAACTTTTAAGTGTAACTTAAACTTAAGATCAGAATGATTCATAAAAGTAATTATTTTGCAGAGAAGCATGGGACATGTGCAGCTCCTGTGATTGTGGGAGAATATGATTACTTTTTGACAACTATCACCATCTTCTCCAAGTATAATGTCACGGTAGGCTTTTTGCTTTTTAAAGTATAATTTCTTCTTACCTTTTTTTTTATATTTTATCATATGTCTATTACAATATTGATATAAAAAACAAATTCAATAGTTGAGTTTGGGTATTAAATTTGGGTGTCTTATTTGTTAACAGAAAGTTTTGAGTGATGCTGGATTTGTAGCTTCCAATACTGAAAAGTATCCTATTGAAGATGTGGTAGCTGCAATTAAGAATGAATTCAATAATGCAACTCCAAAGATTAGTTGTGCTAAAAAGGGGGCTGTCAAAGAACTTTGGTTATGCTTTGACAAAAGCTTTGAGGTAATAGTTTTTTTCCTTCTATTTTGAACCAGTTTTGTAGGCTCTTGATACTATCTTGTATCAACCTAGAGAGTAGTCTTAACAAAATTACATCTTTCTACCCTAAAAGACATGAATTCTTAGTTTATTTCTAGAAAAAGAAAGACAATTACCTATCTTTTAAAATATTCTTAATTACAAGATACTAACCAAAGTAAATATGTACTTGTTACAGCCACGTGACTGCAATCTACCGAATTCATGCCCCGATTTCATCAAGTTCCCAACATATGAACCTCAGGGTATGCTTTTCCTTTCCTTAGTTAAAATTAAGAAACTAATTTTAGAGTTTGATTGCATATGGAATAATGTCATCAAATCATTACTATACTCAAGAGCTTAAGTTAATTAGCTAATAATTAATATATATGATATATACTTAATCCTGTTTAATACATTGCTTTTAACATATTTGTATTATTTACGATGCAGAGCCTAACAAGGTTGAGGGAGCAATTCCATGGATTGCTGATGTTGAAGAAATTATTTAACCTTTTCATTTAAACCTAAAAGAGATGGCTAGCTAGAGGAACCCTTTAATGATTAACATTTTGGCAATGTCTTTTGGGCAATGCCTTTGTGATCTTAAGCTCACCCAAATTTCTTTGAGTTGAAAAGATGCATTATGCATGTGGGTTTGCTTTTCCAAATAAAAAGGCAGTTGATAATAAAACAATAAGTTGA

mRNA sequence

ATGGCTTCTTTATCCATTAAAGCCAAGGCCATGGTGTTTGTTGTTGTTGTTCTTCTTCAGCTGCTGACGGTGGTGTTCGGGTTCTCTGCGGAGGCCCCAAGCAGCAGTGAGCAGAGGGAATTTGATTACTTTGTATTGGCTCTTCAATGGCCAGGTAGTTCTTGCAAAAACCCTGGCAAGTGTTGCCCATCCAACGCCTGCTGCCGTGGAGCTGAGTCCCCCACTGAATTTACAATCCATGGATTGTGGCCTCAGTATAATGAGAAAGGATGGCCATCTTGTTGCACTGATGCAAGCTTTAATGAAAATGAGATTAATATCTTGACAGAGGATATTCAAAAGTATTGGCCAACTTACAGATGTGGTACTACATCCACATGCCACCAGACGAAGGGATCATTTTGGGCACATGAGTATGAGAAGCATGGGACATGTGCAGCTCCTGTGATTGTGGGAGAATATGATTACTTTTTGACAACTATCACCATCTTCTCCAAGTATAATGTCACGAAAGTTTTGAGTGATGCTGGATTTGTAGCTTCCAATACTGAAAAGTATCCTATTGAAGATGTGGTAGCTGCAATTAAGAATGAATTCAATAATGCAACTCCAAAGATTAGTTGTGCTAAAAAGGGGGCTGTCAAAGAACTTTGGTTATGCTTTGACAAAAGCTTTGAGCCACGTGACTGCAATCTACCGAATTCATGCCCCGATTTCATCAAGTTCCCAACATATGAACCTCAGGAGCCTAACAAGGTTGAGGGAGCAATTCCATGGATTGCTGATGTTGAAGAAATTATTTAA

Coding sequence (CDS)

ATGGCTTCTTTATCCATTAAAGCCAAGGCCATGGTGTTTGTTGTTGTTGTTCTTCTTCAGCTGCTGACGGTGGTGTTCGGGTTCTCTGCGGAGGCCCCAAGCAGCAGTGAGCAGAGGGAATTTGATTACTTTGTATTGGCTCTTCAATGGCCAGGTAGTTCTTGCAAAAACCCTGGCAAGTGTTGCCCATCCAACGCCTGCTGCCGTGGAGCTGAGTCCCCCACTGAATTTACAATCCATGGATTGTGGCCTCAGTATAATGAGAAAGGATGGCCATCTTGTTGCACTGATGCAAGCTTTAATGAAAATGAGATTAATATCTTGACAGAGGATATTCAAAAGTATTGGCCAACTTACAGATGTGGTACTACATCCACATGCCACCAGACGAAGGGATCATTTTGGGCACATGAGTATGAGAAGCATGGGACATGTGCAGCTCCTGTGATTGTGGGAGAATATGATTACTTTTTGACAACTATCACCATCTTCTCCAAGTATAATGTCACGAAAGTTTTGAGTGATGCTGGATTTGTAGCTTCCAATACTGAAAAGTATCCTATTGAAGATGTGGTAGCTGCAATTAAGAATGAATTCAATAATGCAACTCCAAAGATTAGTTGTGCTAAAAAGGGGGCTGTCAAAGAACTTTGGTTATGCTTTGACAAAAGCTTTGAGCCACGTGACTGCAATCTACCGAATTCATGCCCCGATTTCATCAAGTTCCCAACATATGAACCTCAGGAGCCTAACAAGGTTGAGGGAGCAATTCCATGGATTGCTGATGTTGAAGAAATTATTTAA

Protein sequence

MASLSIKAKAMVFVVVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGKCCPSNACCRGAESPTEFTIHGLWPQYNEKGWPSCCTDASFNENEINILTEDIQKYWPTYRCGTTSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVASNTEKYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDKSFEPRDCNLPNSCPDFIKFPTYEPQEPNKVEGAIPWIADVEEII*

Homology

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BLAST of Csa4G109540 vs. Swiss-Prot
Match: RNS2_ARATH (Ribonuclease 2 OS=Arabidopsis thaliana GN=RNS2 PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.3e-70
Identity = 115/216 (53.24%), Postives = 153/216 (70.83%), Query Frame = 1


Query: 38  QREFDYFVLALQWPGSSCKNPGKCCPSNACCRGAESPTEFTIHGLWPQYNEKGWPSCCTD 97
           QREFDYF L+LQWPG+ C+    CC  NACCRG+++PT+FTIHGLWP YN+  WPSCC  
Sbjct: 29  QREFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCCYR 88

Query: 98  ASFNENEINILTEDIQKYWPTYRCGTTSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYF 157
           + F E EI+ L + ++KYWP+  CG+ S+C+  KGSFW HE+EKHGTC++PV   EY+YF
Sbjct: 89  SDFKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYF 148

Query: 158 LTTITIFSKYNVTKVLSDAGFVASNTEKYPIEDVVAAIKNEFNNATPKISCAKKGAVKEL 217
           LTT+ ++ K+NVT VL  AG+VASN+EKYP+  +V AI+N F + TP++ C K+ A+ E+
Sbjct: 149 LTTLNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAF-HITPEVVC-KRDAIDEI 208

Query: 218 WLCFDKSFEPRDC------NLPNSCPDFIKFPTYEP 248
            +CF K F+PRDC          SCP ++  P Y P
Sbjct: 209 RICFYKDFKPRDCVGSQDLTSRKSCPKYVSLPEYTP 242

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BLAST of Csa4G109540 vs. Swiss-Prot
Match: RNS1_ARATH (Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.2e-27
Identity = 79/216 (36.57%), Postives = 117/216 (54.17%), Query Frame = 1


Query: 15  VVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGKCCPSNACCRGAESP 74
           ++ LL +L  VF     A SSSE  +FD+F    QWPGS C    KCC  N+     +  
Sbjct: 10  LISLLVILPSVFS----ASSSSE--DFDFFYFVQQWPGSYCDTQKKCCYPNS----GKPA 69

Query: 75  TEFTIHGLWPQYNEKGWPSCCTDAS--FNENEINILTEDIQKYWPTYRCGTTSTCHQTKG 134
            +F IHGLWP Y +  +PS C DAS  F+ + I+ L   ++K WPT  C + S       
Sbjct: 70  ADFGIHGLWPNYKDGTYPSNC-DASKPFDSSTISDLLTSMKKSWPTLACPSGSG-----E 129

Query: 135 SFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVASNTEKYPIEDVV 194
           +FW HE+EKHGTC+  VI  +++YF T + +  K N+   L+ AG +  + + Y +E + 
Sbjct: 130 AFWEHEWEKHGTCSESVI-DQHEYFQTALNLKQKTNLLGALTKAG-INPDGKSYSLESIR 189

Query: 195 AAIKNEFNNATPKISCAKKGA----VKELWLCFDKS 225
            +IK E    TP + C + G+    + +++LC D+S
Sbjct: 190 DSIK-ESIGFTPWVECNRDGSGNSQLYQVYLCVDRS 206

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BLAST of Csa4G109540 vs. Swiss-Prot
Match: RNS3_ARATH (Ribonuclease 3 OS=Arabidopsis thaliana GN=RNS3 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.5e-26
Identity = 75/242 (30.99%), Postives = 117/242 (48.35%), Query Frame = 1


Query: 13  FVVVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGKCCPSNACCRGAE 72
           F+ ++ LQ L V           S  ++FD+F   LQWPG+ C +   CC         +
Sbjct: 4   FIFILALQQLYV----------QSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQT----GK 63

Query: 73  SPTEFTIHGLWPQYNEKGWP-SCCTDASFNENEINILTEDIQKYWPTYRCGTTSTCHQTK 132
              +F IHGLWP Y   GWP +C  D+ F++  ++ L  D+Q+ WPT  C +        
Sbjct: 64  PAADFGIHGLWPNYKTGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGM---- 123

Query: 133 GSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVASNTEKYPIEDV 192
             FW HE+EKHGTCA   +  ++DYF   + +  K N+   L++AG +  + + Y ++D+
Sbjct: 124 -KFWTHEWEKHGTCAESEL-DQHDYFEAGLKLKQKANLLHALTNAG-IKPDDKFYEMKDI 183

Query: 193 VAAIKNEFNNATPKISCAKKGA----VKELWLCFDKSFEPRDCNLP----NSCPDFIKFP 246
              IK     A P I C K  +    + +++LC D S   +  N P      C   ++FP
Sbjct: 184 ENTIKQVVGFA-PGIECNKDSSHNSQLYQIYLCVDTS-ASKFINCPVMPHGRCDSRVQFP 222

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BLAST of Csa4G109540 vs. Swiss-Prot
Match: RNLX_SOLLC (Intracellular ribonuclease LX OS=Solanum lycopersicum GN=RNALX PE=1 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 8.7e-25
Identity = 71/253 (28.06%), Postives = 123/253 (48.62%), Query Frame = 1


Query: 6   IKAKAMVFVVVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGKCCPSN 65
           +K++  + + ++++Q L V+   S         ++FD+F    QWP S C     CC   
Sbjct: 2   MKSQKKLLIKIIVVQCLLVLCVTS---------QDFDFFYFVQQWPASYCDTRRSCCYPT 61

Query: 66  ACCRGAESPTEFTIHGLWPQYNEKGWP-SCCTDASFNENEINILTEDIQKYWPTYRCGTT 125
                 +   +F+IHGLWP Y +  WP +C  ++S +E+E + L   ++K WP+  C ++
Sbjct: 62  T----GKPDEDFSIHGLWPNYKDGKWPQNCDRESSLDESEFSDLISTMEKNWPSLACPSS 121

Query: 126 STCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVASNTE 185
                    FW+HE+ KHGTC+A   + ++ YF T +   +K N+ + L++AG    N +
Sbjct: 122 DGL-----KFWSHEWLKHGTCSA---LNQHAYFQTALDFKTKSNLLQNLNNAGIKPRNGD 181

Query: 186 KYPIEDVVAAIKNEFNNATPKISC----AKKGAVKELWLCFDKSFEP-RDCNL---PNSC 245
            Y +E +  AI+    + TP I C         + +++LC D S     DC +      C
Sbjct: 182 YYGVESIKKAIEKGVGH-TPFIECNVDSQGNHQLYQVYLCVDSSASKFIDCPIFPHGGKC 232

Query: 246 PDFIKFPTYEPQE 250
              I+FP++   +
Sbjct: 242 GSKIEFPSFSTND 232

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BLAST of Csa4G109540 vs. Swiss-Prot
Match: RNLE_SOLLC (Extracellular ribonuclease LE OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 4.3e-24
Identity = 70/249 (28.11%), Postives = 123/249 (49.40%), Query Frame = 1


Query: 5   SIKAKAMVFVVVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGKCCPS 64
           S  A ++  +++++ Q L+V+          +  ++FD+F    QWPGS C     CC  
Sbjct: 3   SNSAFSLFLILLIITQCLSVL----------NAAKDFDFFYFVQQWPGSYCDTKQSCCYP 62

Query: 65  NACCRGAESPTEFTIHGLWPQYNEKGWPSCCTDAS-FNENEINILTEDIQKYWPTYRCGT 124
                  +   +F IHGLWP  N+  +PS C   S +++++I+ L   +Q+ WPT  C +
Sbjct: 63  TT----GKPAADFGIHGLWPNNNDGTYPSNCDPNSPYDQSQISDLISSMQQNWPTLACPS 122

Query: 125 TSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVASNT 184
            S       +FW+HE+EKHGTCA  V+  ++ YF   + + ++ ++  +L  A  +  + 
Sbjct: 123 GSG-----STFWSHEWEKHGTCAESVLTNQHAYFKKALDLKNQIDLLSILQGAD-IHPDG 182

Query: 185 EKYPIEDVVAAIKNEFNNATPKISC----AKKGAVKELWLCFDKSFEPR-DCNL--PNSC 244
           E Y + ++  AIK+     TP I C    +    + ++++C D S     +C +     C
Sbjct: 183 ESYDLVNIRNAIKSAI-GYTPWIQCNVDQSGNSQLYQVYICVDGSGSSLIECPIFPGGKC 230

Query: 245 PDFIKFPTY 246
              I+FPT+
Sbjct: 243 GTSIEFPTF 230

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BLAST of Csa4G109540 vs. TrEMBL
Match: A0A0A0L0P9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G109540 PE=3 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 3.2e-159
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1


Query: 1   MASLSIKAKAMVFVVVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGK 60
           MASLSIKAKAMVFVVVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGK
Sbjct: 1   MASLSIKAKAMVFVVVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGK 60

Query: 61  CCPSNACCRGAESPTEFTIHGLWPQYNEKGWPSCCTDASFNENEINILTEDIQKYWPTYR 120
           CCPSNACCRGAESPTEFTIHGLWPQYNEKGWPSCCTDASFNENEINILTEDIQKYWPTYR
Sbjct: 61  CCPSNACCRGAESPTEFTIHGLWPQYNEKGWPSCCTDASFNENEINILTEDIQKYWPTYR 120

Query: 121 CGTTSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVA 180
           CGTTSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVA
Sbjct: 121 CGTTSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVA 180

Query: 181 SNTEKYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDKSFEPRDCNLPNSCPDFI 240
           SNTEKYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDKSFEPRDCNLPNSCPDFI
Sbjct: 181 SNTEKYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDKSFEPRDCNLPNSCPDFI 240

Query: 241 KFPTYEPQEPNKVEGAIPWIADVEEII 268
           KFPTYEPQEPNKVEGAIPWIADVEEII
Sbjct: 241 KFPTYEPQEPNKVEGAIPWIADVEEII 267

[Close]

BLAST of Csa4G109540 vs. TrEMBL
Match: A0A0A0KVR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G109040 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 8.3e-83
Identity = 141/241 (58.51%), Postives = 181/241 (75.10%), Query Frame = 1


Query: 8   AKAMVFVVVVLLQLLTVVF---GFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGKCCPS 67
           ++ +VFVVVV++ ++ VV    GF+       EQREFDYF+LALQWP +SC N   CC +
Sbjct: 6   SRRVVFVVVVVIGIVVVVVDGGGFTV----GKEQREFDYFILALQWPSTSCTNVTVCCTT 65

Query: 68  NACCRGAESPTEFTIHGLWPQYNEKGWPSCCTDASFNENEINILTEDIQKYWPTYRCGTT 127
           NACCR A SPTEFTIHGLWP+Y  KGWPSCCT+ +F+E +I  L ED+ KYWPTYRCG  
Sbjct: 66  NACCRRAVSPTEFTIHGLWPKYEGKGWPSCCTNETFDETQIRSLFEDVDKYWPTYRCGLV 125

Query: 128 STCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVASNTE 187
           S+C   KGSFWAH+YEKHGTC +PVI+ EYDYFLTT+T+F KYNVT+ L +A  VAS+T+
Sbjct: 126 SSCDNRKGSFWAHQYEKHGTCGSPVILQEYDYFLTTLTLFYKYNVTEALENAEIVASDTK 185

Query: 188 KYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDKSFEPRDCNLPNSCPDFIKFPT 246
           KYPI+DV+ A+ + F    PK++C KKG +KE++LCFDK F+ RDC+   SCP  +K P 
Sbjct: 186 KYPIQDVLNAVHSAF-KVNPKLACVKKGIIKEIYLCFDKQFKLRDCDATKSCPKSVKLPK 241

[Close]

BLAST of Csa4G109540 vs. TrEMBL
Match: C4PD01_CITMA (S-like RNase OS=Citrus maxima PE=2 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 7.3e-79
Identity = 143/280 (51.07%), Postives = 187/280 (66.79%), Query Frame = 1


Query: 1   MASLSIKAKAMVFVVVVLLQL---LTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKN 60
           MAS S+    +  V V+L      L  +    A   +  EQREFDYF  ALQWPG+ CKN
Sbjct: 1   MASFSLILIRLSLVAVLLTASFCQLKAIGVREAVDDAVGEQREFDYFNFALQWPGTQCKN 60

Query: 61  PGKCCPSNACCRGAESPTEFTIHGLWPQYNEKGWPSCCTDASFNENEINILTEDIQKYWP 120
              CCPSN CCRG+ +PTEFTIHGLWP YN+  WPSCC  + F+E EI+ L + ++KYWP
Sbjct: 61  TRHCCPSNGCCRGSNAPTEFTIHGLWPDYNDGTWPSCCKKSKFDEKEISTLLDALEKYWP 120

Query: 121 TYRCGTTSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAG 180
           +YRCG+TSTC+  +G FWAHE+EKHGTC+ PV+  EY YF TT+ ++ KYNVT+VL++AG
Sbjct: 121 SYRCGSTSTCYSGEGLFWAHEWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAG 180

Query: 181 FVASNTEKYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDKSFEPRDCNL----- 240
           ++ SNTEKYP+  +V+AI+N F +ATPK+ C+ KGAV EL LCF K F+PRDC +     
Sbjct: 181 YLPSNTEKYPLGGIVSAIQNAF-HATPKLDCS-KGAVNELHLCFYKDFKPRDCIIERSPE 240

Query: 241 ------PNSCPDFIKFPTYEPQEPNKVEGAIPWIADVEEI 267
                  +SCP F+  P Y     +    AIPWI + E +
Sbjct: 241 NDNYFSSSSCPKFVSLPVYMSSGVDDATAAIPWILENEPL 278

[Close]

BLAST of Csa4G109540 vs. TrEMBL
Match: A9P8H2_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 8.1e-78
Identity = 138/271 (50.92%), Postives = 188/271 (69.37%), Query Frame = 1


Query: 1   MASLSIKAKAMVFVVVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGK 60
           MASLS++       ++VLL  +T  +    EA +   QREFDYF L+LQWPG+ C++   
Sbjct: 1   MASLSVQT------LLVLLVFVTASYCMIEEASAIEGQREFDYFALSLQWPGTYCRHTRH 60

Query: 61  CCPSNACCRGAESPTEFTIHGLWPQYNEKGWPSCCTDASFNENEINILTEDIQKYWPTYR 120
           CC  NACCRGA +PTEFTIHGLWP YN+  WP+CCT + FN  EI+ L + ++KYWP+  
Sbjct: 61  CCSQNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNGKEISTLHDALEKYWPSLS 120

Query: 121 CGTTSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVA 180
           CG+ S+CH TKGSFWAHE+EKHGTC++PV+  EY YF TT+ ++ KYNVTKVL++AG+V 
Sbjct: 121 CGSPSSCHGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVP 180

Query: 181 SNTEKYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDKSFEPRDCNLPN------ 240
           SN+EKYP+  +V+AI+N F +ATP++ C+ KG ++EL LCF K F+PRDC + N      
Sbjct: 181 SNSEKYPLGGIVSAIENAF-HATPQLVCS-KGDLEELRLCFYKDFKPRDCVIQNDMYTSK 240

Query: 241 -SCPDFIKFPTYEPQEPNKVEGAIPWIADVE 265
            SCP ++  P Y     +     +PW+ D E
Sbjct: 241 SSCPKYVSLPAYVSLGLDGAGTEVPWVPDNE 263

[Close]

BLAST of Csa4G109540 vs. TrEMBL
Match: B9IAZ9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s17280g PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.1e-77
Identity = 138/271 (50.92%), Postives = 188/271 (69.37%), Query Frame = 1


Query: 1   MASLSIKAKAMVFVVVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGK 60
           MASLS++       ++VLL  +T  +    EA +   QREFDYF L+LQWPG+ C++   
Sbjct: 1   MASLSVQT------LLVLLVFVTASYCMIEEASAIEGQREFDYFALSLQWPGTYCRHTRH 60

Query: 61  CCPSNACCRGAESPTEFTIHGLWPQYNEKGWPSCCTDASFNENEINILTEDIQKYWPTYR 120
           CC  NACCRGA +PTEFTIHGLWP YN+  WP+CCT + FNE EI+ L + ++KYWP+  
Sbjct: 61  CCSQNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNEKEISTLHDALEKYWPSLS 120

Query: 121 CGTTSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVA 180
           CG+ S+CH TKGSFWAHE+EKHGTC++PV+  EY YF TT+ ++ KYNVTKVL++AG+V 
Sbjct: 121 CGSPSSCHGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVP 180

Query: 181 SNTEKYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDKSFEPRDCNLPN------ 240
           SN+EKYP+  +V+AI+N F +ATP++ C+ KG ++EL LCF K F+PRDC + N      
Sbjct: 181 SNSEKYPLGGIVSAIENAF-HATPQLVCS-KGDLEELRLCFYKDFKPRDCVIQNDMYTSK 240

Query: 241 -SCPDFIKFPTYEPQEPNKVEGAIPWIADVE 265
            SCP ++  P Y     +     + W+ D E
Sbjct: 241 SSCPKYVSLPAYVSLGLDGAGTEVSWVPDNE 263

[Close]

BLAST of Csa4G109540 vs. TAIR10
Match: AT2G39780.1 (AT2G39780.1 ribonuclease 2)

HSP 1 Score: 266.9 bits (681), Expect = 1.3e-71
Identity = 115/216 (53.24%), Postives = 153/216 (70.83%), Query Frame = 1


Query: 38  QREFDYFVLALQWPGSSCKNPGKCCPSNACCRGAESPTEFTIHGLWPQYNEKGWPSCCTD 97
           QREFDYF L+LQWPG+ C+    CC  NACCRG+++PT+FTIHGLWP YN+  WPSCC  
Sbjct: 29  QREFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCCYR 88

Query: 98  ASFNENEINILTEDIQKYWPTYRCGTTSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYF 157
           + F E EI+ L + ++KYWP+  CG+ S+C+  KGSFW HE+EKHGTC++PV   EY+YF
Sbjct: 89  SDFKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYF 148

Query: 158 LTTITIFSKYNVTKVLSDAGFVASNTEKYPIEDVVAAIKNEFNNATPKISCAKKGAVKEL 217
           LTT+ ++ K+NVT VL  AG+VASN+EKYP+  +V AI+N F + TP++ C K+ A+ E+
Sbjct: 149 LTTLNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAF-HITPEVVC-KRDAIDEI 208

Query: 218 WLCFDKSFEPRDC------NLPNSCPDFIKFPTYEP 248
            +CF K F+PRDC          SCP ++  P Y P
Sbjct: 209 RICFYKDFKPRDCVGSQDLTSRKSCPKYVSLPEYTP 242

[Close]

BLAST of Csa4G109540 vs. TAIR10
Match: AT1G14220.1 (AT1G14220.1 Ribonuclease T2 family protein)

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-28
Identity = 81/239 (33.89%), Postives = 123/239 (51.46%), Query Frame = 1


Query: 15  VVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGKCCPSNACCRGAESP 74
           V VLL+LL V  G     P    Q +FD+F   LQWPG+ C     CC   +     +  
Sbjct: 7   VNVLLKLL-VFQGLFVSRP----QEDFDFFYFVLQWPGAYCDTSRACCYPTS----GKPA 66

Query: 75  TEFTIHGLWPQYNEKGWPS-CCTDASFNENEINILTEDIQKYWPTYRCGTTSTCHQTKGS 134
            +F IHGLWP YN   WPS C  D+ F+ ++I+ L   ++K WPT  C +         +
Sbjct: 67  ADFGIHGLWPNYNGGSWPSNCDPDSQFDRSQISDLVSSLKKNWPTLSCPSNEGF-----N 126

Query: 135 FWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVASNTEKYPIEDVVA 194
           FW HE+EKHGTC+  V + +++YF   + +  K N+ ++L ++G +  +   Y ++ +  
Sbjct: 127 FWEHEWEKHGTCSESV-MDQHEYFENALKLKQKANLLQILKNSG-INPDDGFYNLDKITN 186

Query: 195 AIKNEFNNATPKISCAK----KGAVKELWLCFDKS-FEPRDCN-LP-NSCPDFIKFPTY 246
           AIK+     TP I C K       + ++++C D S  E  +C  LP  SCP  I+F  +
Sbjct: 187 AIKDGI-GFTPGIECNKDPERNAQLHQIYICVDTSGTEFIECPVLPRGSCPSQIQFSKF 228

[Close]

BLAST of Csa4G109540 vs. TAIR10
Match: AT2G02990.1 (AT2G02990.1 ribonuclease 1)

HSP 1 Score: 123.2 bits (308), Expect = 2.4e-28
Identity = 79/216 (36.57%), Postives = 117/216 (54.17%), Query Frame = 1


Query: 15  VVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGKCCPSNACCRGAESP 74
           ++ LL +L  VF     A SSSE  +FD+F    QWPGS C    KCC  N+     +  
Sbjct: 10  LISLLVILPSVFS----ASSSSE--DFDFFYFVQQWPGSYCDTQKKCCYPNS----GKPA 69

Query: 75  TEFTIHGLWPQYNEKGWPSCCTDAS--FNENEINILTEDIQKYWPTYRCGTTSTCHQTKG 134
            +F IHGLWP Y +  +PS C DAS  F+ + I+ L   ++K WPT  C + S       
Sbjct: 70  ADFGIHGLWPNYKDGTYPSNC-DASKPFDSSTISDLLTSMKKSWPTLACPSGSG-----E 129

Query: 135 SFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVASNTEKYPIEDVV 194
           +FW HE+EKHGTC+  VI  +++YF T + +  K N+   L+ AG +  + + Y +E + 
Sbjct: 130 AFWEHEWEKHGTCSESVI-DQHEYFQTALNLKQKTNLLGALTKAG-INPDGKSYSLESIR 189

Query: 195 AAIKNEFNNATPKISCAKKGA----VKELWLCFDKS 225
            +IK E    TP + C + G+    + +++LC D+S
Sbjct: 190 DSIK-ESIGFTPWVECNRDGSGNSQLYQVYLCVDRS 206

[Close]

BLAST of Csa4G109540 vs. TAIR10
Match: AT1G26820.1 (AT1G26820.1 ribonuclease 3)

HSP 1 Score: 120.2 bits (300), Expect = 2.0e-27
Identity = 75/242 (30.99%), Postives = 117/242 (48.35%), Query Frame = 1


Query: 13  FVVVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGKCCPSNACCRGAE 72
           F+ ++ LQ L V           S  ++FD+F   LQWPG+ C +   CC         +
Sbjct: 4   FIFILALQQLYV----------QSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQT----GK 63

Query: 73  SPTEFTIHGLWPQYNEKGWP-SCCTDASFNENEINILTEDIQKYWPTYRCGTTSTCHQTK 132
              +F IHGLWP Y   GWP +C  D+ F++  ++ L  D+Q+ WPT  C +        
Sbjct: 64  PAADFGIHGLWPNYKTGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGM---- 123

Query: 133 GSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVASNTEKYPIEDV 192
             FW HE+EKHGTCA   +  ++DYF   + +  K N+   L++AG +  + + Y ++D+
Sbjct: 124 -KFWTHEWEKHGTCAESEL-DQHDYFEAGLKLKQKANLLHALTNAG-IKPDDKFYEMKDI 183

Query: 193 VAAIKNEFNNATPKISCAKKGA----VKELWLCFDKSFEPRDCNLP----NSCPDFIKFP 246
              IK     A P I C K  +    + +++LC D S   +  N P      C   ++FP
Sbjct: 184 ENTIKQVVGFA-PGIECNKDSSHNSQLYQIYLCVDTS-ASKFINCPVMPHGRCDSRVQFP 222

[Close]

BLAST of Csa4G109540 vs. TAIR10
Match: AT1G14210.1 (AT1G14210.1 Ribonuclease T2 family protein)

HSP 1 Score: 103.2 bits (256), Expect = 2.5e-22
Identity = 70/244 (28.69%), Postives = 114/244 (46.72%), Query Frame = 1


Query: 9   KAMVFVVVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGKCCPSNACC 68
           + ++ V +++LQ L V         SS  + +F++F     WPG+ C +   CCP     
Sbjct: 2   RGIIIVSLLILQSLVV--------SSSQTEPDFNFFYWVNYWPGAICDSQKGCCPPTK-- 61

Query: 69  RGAESPTEFTIHGLWPQYNEKGWPSCCTDAS-FNENEINILTEDIQKYWPTYRCGTTSTC 128
               + ++F IHGLWPQ+N   WP+ C   + F+ ++I+ L   ++K W  +       C
Sbjct: 62  --GNTASDFIIHGLWPQFNNGTWPAFCDQTNLFDISKISDLVCQMEKKWTEW---GVWAC 121

Query: 129 HQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVASNTEKYP 188
              + + W HE+ KHGTC    I  ++ YF T +    K ++  +L   G +  N   Y 
Sbjct: 122 PSNETNLWEHEWNKHGTCVQS-IFDQHSYFRTNLKFKHKVHLLNILIQKG-IKPNDGFYS 181

Query: 189 IEDVVAAIKNEFNNATPKISCAK--KG--AVKELWLCFD---KSFEPRDCNLPNSCPDFI 245
           ++++  AIK     A P I C +  KG   + ++++C D   K F         SC   I
Sbjct: 182 LDEIKNAIKCAIGFA-PGIECNEDVKGNKQLFQIYICLDNYAKEFVECPYVPDKSCASKI 227

[Close]

BLAST of Csa4G109540 vs. NCBI nr
Match: gi|449438773|ref|XP_004137162.1| (PREDICTED: ribonuclease 2-like [Cucumis sativus])

HSP 1 Score: 568.9 bits (1465), Expect = 4.6e-159
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1


Query: 1   MASLSIKAKAMVFVVVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGK 60
           MASLSIKAKAMVFVVVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGK
Sbjct: 1   MASLSIKAKAMVFVVVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGK 60

Query: 61  CCPSNACCRGAESPTEFTIHGLWPQYNEKGWPSCCTDASFNENEINILTEDIQKYWPTYR 120
           CCPSNACCRGAESPTEFTIHGLWPQYNEKGWPSCCTDASFNENEINILTEDIQKYWPTYR
Sbjct: 61  CCPSNACCRGAESPTEFTIHGLWPQYNEKGWPSCCTDASFNENEINILTEDIQKYWPTYR 120

Query: 121 CGTTSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVA 180
           CGTTSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVA
Sbjct: 121 CGTTSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVA 180

Query: 181 SNTEKYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDKSFEPRDCNLPNSCPDFI 240
           SNTEKYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDKSFEPRDCNLPNSCPDFI
Sbjct: 181 SNTEKYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDKSFEPRDCNLPNSCPDFI 240

Query: 241 KFPTYEPQEPNKVEGAIPWIADVEEII 268
           KFPTYEPQEPNKVEGAIPWIADVEEII
Sbjct: 241 KFPTYEPQEPNKVEGAIPWIADVEEII 267

[Close]

BLAST of Csa4G109540 vs. NCBI nr
Match: gi|659125801|ref|XP_008462866.1| (PREDICTED: ribonuclease 2-like [Cucumis melo])

HSP 1 Score: 512.7 bits (1319), Expect = 3.9e-142
Identity = 235/267 (88.01%), Postives = 251/267 (94.01%), Query Frame = 1


Query: 1   MASLSIKAKAMVFVVVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGK 60
           MAS SIK K MVF+ +++ +LLTVVFGFSAEAPS SEQREFDYFVLALQWP +SCKN GK
Sbjct: 1   MASFSIKGKPMVFLFLIV-ELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGK 60

Query: 61  CCPSNACCRGAESPTEFTIHGLWPQYNEKGWPSCCTDASFNENEINILTEDIQKYWPTYR 120
           CCPSNACCRGA+SPTEFTIHGLWPQYNEKGWPSCCTDASFNENEI IL EDIQKYWPTYR
Sbjct: 61  CCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWPTYR 120

Query: 121 CGTTSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVA 180
           CGT+STCH+TKGSFWAHEYEKHGTCAAPV+VGEYDYFLT +TIFSKYNVTKVLS+ GFVA
Sbjct: 121 CGTSSTCHRTKGSFWAHEYEKHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVA 180

Query: 181 SNTEKYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDKSFEPRDCNLPNSCPDFI 240
           SNTEKYPIEDV+AAIKN+F NATPKI+CAKKG VKELWLCFDKSFEPRDCNL +SCPDFI
Sbjct: 181 SNTEKYPIEDVIAAIKNKFYNATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFI 240

Query: 241 KFPTYEPQEPNKVEGAIPWIADVEEII 268
           K PTYEPQEPNKVEGAIPWIADVEEII
Sbjct: 241 KLPTYEPQEPNKVEGAIPWIADVEEII 266

[Close]

BLAST of Csa4G109540 vs. NCBI nr
Match: gi|778691966|ref|XP_011653385.1| (PREDICTED: ribonuclease 2-like [Cucumis sativus])

HSP 1 Score: 333.2 bits (853), Expect = 4.2e-88
Identity = 151/264 (57.20%), Postives = 198/264 (75.00%), Query Frame = 1


Query: 8   AKAMVFVVVVLLQLLTVVF---GFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGKCCPS 67
           ++ +VFVVVV++ ++ VV    GF+       EQREFDYF+LALQWP +SC N   CC +
Sbjct: 6   SRRVVFVVVVVIGIVVVVVDGGGFTV----GKEQREFDYFILALQWPSTSCTNVTVCCTT 65

Query: 68  NACCRGAESPTEFTIHGLWPQYNEKGWPSCCTDASFNENEINILTEDIQKYWPTYRCGTT 127
           NACCR A SPTEFTIHGLWP+Y  KGWPSCCT+ +F+E +I  L ED+ KYWPTYRCG  
Sbjct: 66  NACCRRAVSPTEFTIHGLWPKYEGKGWPSCCTNETFDETQIRSLFEDVDKYWPTYRCGLV 125

Query: 128 STCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVASNTE 187
           S+C   KGSFWAH+YEKHGTC +PVI+ EYDYFLTT+T+F KYNVT+ L +A  VAS+T+
Sbjct: 126 SSCDNRKGSFWAHQYEKHGTCGSPVILQEYDYFLTTLTLFYKYNVTEALENAEIVASDTK 185

Query: 188 KYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDKSFEPRDCNLPNSCPDFIKFPT 247
           KYPI+DV+ A+ + F    PK++C KKG +KE++LCFDK F+ RDC+   SCP  +K P 
Sbjct: 186 KYPIQDVLNAVHSAF-KVNPKLACVKKGIIKEIYLCFDKQFKLRDCDATKSCPKSVKLPK 245

Query: 248 Y-EPQEPNKVEGAIPWIADVEEII 268
           + +P EP+ ++ AIP + D+EEI+
Sbjct: 246 FHKPHEPDVIKRAIPIVIDIEEIM 264

[Close]

BLAST of Csa4G109540 vs. NCBI nr
Match: gi|659125792|ref|XP_008462862.1| (PREDICTED: ribonuclease 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 331.3 bits (848), Expect = 1.6e-87
Identity = 149/268 (55.60%), Postives = 199/268 (74.25%), Query Frame = 1


Query: 1   MASLSIKAKAMVFVVVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGK 60
           M     +++ +VFVVVV++ ++   +GF+       EQREFDYFVLALQWP + C+N  +
Sbjct: 1   MLKAGSRSRRVVFVVVVVIGIIVDGWGFTV----GKEQREFDYFVLALQWPSTLCRNVTE 60

Query: 61  CCPSNACCRGAESPTEFTIHGLWPQYNEKGWPSCCTDASFNENEINILTEDIQKYWPTYR 120
           CCP+NAC R A S T+FTIHGLWP+Y  KGWPSCCT+A+FN+ +I  L ED+ KYWPTYR
Sbjct: 61  CCPTNACYRRAVSATKFTIHGLWPKYEGKGWPSCCTNATFNQTQIGSLFEDVDKYWPTYR 120

Query: 121 CGTTSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVA 180
           CG  S+C   KGSFWAH+YEKHGTC +PVI+ EYDYFLTT+T+F KYNVT+ L +A  VA
Sbjct: 121 CGLVSSCDNRKGSFWAHQYEKHGTCGSPVILQEYDYFLTTLTLFFKYNVTEALENAEIVA 180

Query: 181 SNTEKYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDKSFEPRDCNLPNSCPDFI 240
           S+  KYPI+DV+ A+ + F  A PK++C K G +KE++LCFDK F+ RDC+   SCP  +
Sbjct: 181 SDIRKYPIQDVLNAVHSAF-KANPKLACIKNGIIKEMYLCFDKQFKLRDCDATKSCPKSV 240

Query: 241 KFPTY-EPQEPNKVEGAIPWIADVEEII 268
           K P + +PQEP+ ++ AIP + D+EEI+
Sbjct: 241 KLPKFHKPQEPDVIKRAIPRVIDIEEIM 263

[Close]

BLAST of Csa4G109540 vs. NCBI nr
Match: gi|700198557|gb|KGN53715.1| (hypothetical protein Csa_4G109040 [Cucumis sativus])

HSP 1 Score: 315.1 bits (806), Expect = 1.2e-82
Identity = 141/241 (58.51%), Postives = 181/241 (75.10%), Query Frame = 1


Query: 8   AKAMVFVVVVLLQLLTVVF---GFSAEAPSSSEQREFDYFVLALQWPGSSCKNPGKCCPS 67
           ++ +VFVVVV++ ++ VV    GF+       EQREFDYF+LALQWP +SC N   CC +
Sbjct: 6   SRRVVFVVVVVIGIVVVVVDGGGFTV----GKEQREFDYFILALQWPSTSCTNVTVCCTT 65

Query: 68  NACCRGAESPTEFTIHGLWPQYNEKGWPSCCTDASFNENEINILTEDIQKYWPTYRCGTT 127
           NACCR A SPTEFTIHGLWP+Y  KGWPSCCT+ +F+E +I  L ED+ KYWPTYRCG  
Sbjct: 66  NACCRRAVSPTEFTIHGLWPKYEGKGWPSCCTNETFDETQIRSLFEDVDKYWPTYRCGLV 125

Query: 128 STCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVASNTE 187
           S+C   KGSFWAH+YEKHGTC +PVI+ EYDYFLTT+T+F KYNVT+ L +A  VAS+T+
Sbjct: 126 SSCDNRKGSFWAHQYEKHGTCGSPVILQEYDYFLTTLTLFYKYNVTEALENAEIVASDTK 185

Query: 188 KYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDKSFEPRDCNLPNSCPDFIKFPT 246
           KYPI+DV+ A+ + F    PK++C KKG +KE++LCFDK F+ RDC+   SCP  +K P 
Sbjct: 186 KYPIQDVLNAVHSAF-KVNPKLACVKKGIIKEIYLCFDKQFKLRDCDATKSCPKSVKLPK 241

The following BLAST results are available for this feature:

BLAST of Csa4G109540 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RNS2_ARATH	2.3e-70	53.24	Ribonuclease 2 OS=Arabidopsis thaliana GN=RNS2 PE=2 SV=1	[more]
RNS1_ARATH	4.2e-27	36.57	Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1	[more]
RNS3_ARATH	3.5e-26	30.99	Ribonuclease 3 OS=Arabidopsis thaliana GN=RNS3 PE=2 SV=1	[more]
RNLX_SOLLC	8.7e-25	28.06	Intracellular ribonuclease LX OS=Solanum lycopersicum GN=RNALX PE=1 SV=2	[more]
RNLE_SOLLC	4.3e-24	28.11	Extracellular ribonuclease LE OS=Solanum lycopersicum PE=1 SV=2	[more]

BLAST of Csa4G109540 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0P9_CUCSA	3.2e-159	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G109540 PE=3 SV=1	[more]
A0A0A0KVR6_CUCSA	8.3e-83	58.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G109040 PE=3 SV=1	[more]
C4PD01_CITMA	7.3e-79	51.07	S-like RNase OS=Citrus maxima PE=2 SV=1	[more]
A9P8H2_POPTR	8.1e-78	50.92	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]
B9IAZ9_POPTR	1.1e-77	50.92	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s17280g PE=3 SV=1	[more]

BLAST of Csa4G109540 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39780.1	1.3e-71	53.24	ribonuclease 2	[more]
AT1G14220.1	1.1e-28	33.89	Ribonuclease T2 family protein	[more]
AT2G02990.1	2.4e-28	36.57	ribonuclease 1	[more]
AT1G26820.1	2.0e-27	30.99	ribonuclease 3	[more]
AT1G14210.1	2.5e-22	28.69	Ribonuclease T2 family protein	[more]

BLAST of Csa4G109540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438773\|ref\|XP_004137162.1\|	4.6e-159	100.00	PREDICTED: ribonuclease 2-like [Cucumis sativus]	[more]
gi\|659125801\|ref\|XP_008462866.1\|	3.9e-142	88.01	PREDICTED: ribonuclease 2-like [Cucumis melo]	[more]
gi\|778691966\|ref\|XP_011653385.1\|	4.2e-88	57.20	PREDICTED: ribonuclease 2-like [Cucumis sativus]	[more]
gi\|659125792\|ref\|XP_008462862.1\|	1.6e-87	55.60	PREDICTED: ribonuclease 2-like isoform X1 [Cucumis melo]	[more]
gi\|700198557\|gb\|KGN53715.1\|	1.2e-82	58.51	hypothetical protein Csa_4G109040 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001568	RNase_T2-like
IPR018188	RNase_T2_His_AS_1

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0033897	ribonuclease T2 activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044248	cellular catabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU090841	cucumber EST collection version 3.0	transcribed_cluster
CU104443	cucumber EST collection version 3.0	transcribed_cluster
CU111799	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa4G109540.1	Csa4G109540.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU104443	CU104443	transcribed_cluster
CU090841	CU090841	transcribed_cluster
CU111799	CU111799	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001568	Ribonuclease T2-like	GENE3D	G3DSA:3.90.730.10		coord: 38..245 score: 7.6
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 1..267 score: 1.8
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 43..230 score: 6.8
IPR001568	Ribonuclease T2-like	unknown	SSF55895	Ribonuclease Rh-like	coord: 40..245 score: 1.44
IPR018188	Ribonuclease T2, His active site 1	PROSITE	PS00530	RNASE_T2_1	coord: 77..84 scor
None	No IPR available	PANTHER	PTHR11240:SF16	RIBONUCLEASE 2	coord: 1..267 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa4G109540	Silver-seed gourd	carcuB0404
Csa4G109540	Silver-seed gourd	carcuB0887
Csa4G109540	Watermelon (97103) v2	cuwmbB272
Csa4G109540	Wax gourd	cuwgoB358
Csa4G109540	Cucumber (Gy14) v1	cgycuB556
Csa4G109540	Cucurbita maxima (Rimu)	cmacuB334
Csa4G109540	Cucurbita maxima (Rimu)	cmacuB712
Csa4G109540	Cucurbita moschata (Rifu)	cmocuB326
Csa4G109540	Cucurbita moschata (Rifu)	cmocuB702
Csa4G109540	Melon (DHL92) v3.5.1	cumeB315
Csa4G109540	Watermelon (Charleston Gray)	cuwcgB272
Csa4G109540	Watermelon (97103) v1	cuwmB293
Csa4G109540	Cucurbita pepo (Zucchini)	cpecuB222
Csa4G109540	Cucurbita pepo (Zucchini)	cpecuB403
Csa4G109540	Bottle gourd (USVL1VR-Ls)	culsiB276
Csa4G109540	Cucumber (Gy14) v2	cgybcuB165
Csa4G109540	Melon (DHL92) v3.6.1	cumedB302