Csa4G056680 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G056680
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionHolliday junction ATP-dependent DNA helicase RuvB; contains IPR008921 (DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal), IPR021886 (MgsA AAA+ ATPase C-terminal), IPR027417 (P-loop containing nucleoside triphosphate hydrolase)
LocationChr4 : 4844409 .. 4845913 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGACCTCGAACCATCGATGATGTGGTTGGCCAAGATCATCTACTAGCGAAGAATTCTATCCTTCGTTCTTCTCTGGATTGCAATCGGTTGCCTTCGATTGTCCTTTGGGGTCCACCTGGTACAGGTAAGACCTCCATTGCCAAAGCTATTGTTGGTTCTACTTCTTCTTTCTCTCAGTCTTTTCGATTTGTGTCTTTGTCTGCTGTTACTTCCGGCGTCAAGGACGTTAGGGATGCTGTTGAGGAAGCTAGAAAAATTAGAATCAAGAATAATAAGAGGACTGTTTTGTTTTTGGATGAGGTTCACAGGTTCAACAAATCCCAACAGGATTCCTTTTTGCCTGTCATTGAAGATGGAAGCATCATCTTCTTGGGTGCTACTACAGAGAATCCTTCTTTCCATTTGATCACTCCATTGTTGTCCAGATCTAGAGTTCTTACTCTTAACCCCTTGAAACCCCACCATGTTACTTTGATTTTGAAACGAGCTGTGGATGATTCTGATAAGGGATTAGCTCGAACTATTTCCATGGGTGTTCAAATTGGGGAGGATGCTATTGATTTCATAGCGGCTAATTGTGATGGCGATGCTAGGACTGCTTTGAATGCTTTGGAGATCTCTGCTATCACTGCTGCAGCTCGAACCAACTCCGTCCAAATTGACGATCGCAATGTAGAAGACCCCGATGAGAATACTACCAACTTCGAATCGTCTGTAGCTGTTGTTACTCTTGATGATGTAAAGGAGGCACTTCAATGTAAGCATATTGCTTATGATAAAGCAGGGGAAGAACACTACAATCTCATAAGTGCACTTCATAAATCCATGAGAGGATGTGATGCTGATGCTTCAATTTACTGGCTAGCAAGAATGTTGGAAGGTGGAGAACAGCCATTATATATAGCTAGGAGACTTGTAAGGTTTGCAAGCGAAGACGTCGGGTTAGCTGACCCATTAGCTCTCAATCAAGCTGTTTCTTGCTATCAAGCTTGCCACTTCATAGGCATGCCTGAGTGCAATGTCATTCTAGCTCAATGTGTCGCGTATTTAGCACTCGCACCGAAGTCGATTGCGGTGTATCGAGCAATGGGAGCTGCAGAGAAGGTAGTGAGGGAATCTGTTGGACAGAATGAGGGTGTGCCTCTACATTTGAGGAATGCTCCAACAAAGTTGATGAAGGAAATTGGATATGGGAAGGGATATATTTACACTCCGGATAATCCATCAGCAACACAAAGCTTTCTTCCACCTTCTCTTAAAGGATACAAATTTCTTAACTGGCCAGACTCGGAAGATACAAAAAAATGACCAAATTTGGAGTAGTTGTTAACTGTAACTTTGGTGAATACTGTTTTTTTTGGGGGGCTTTACCTTTTTGTTATTCTTGTGGAGTTAAATGAACATTTTGGTGGCTTTTGTCTTTGCCATATTTTTATGGCTAAGTGCTTATATCATTATATGAACGGTAATGTTTGTATGTAGTGATGAATGCTCTGTGCCCC

mRNA sequence

ATGCGACCTCGAACCATCGATGATGTGGTTGGCCAAGATCATCTACTAGCGAAGAATTCTATCCTTCGTTCTTCTCTGGATTGCAATCGGTTGCCTTCGATTGTCCTTTGGGGTCCACCTGGTACAGGTAAGACCTCCATTGCCAAAGCTATTGTTGGTTCTACTTCTTCTTTCTCTCAGTCTTTTCGATTTGTGTCTTTGTCTGCTGTTACTTCCGGCGTCAAGGACGTTAGGGATGCTGTTGAGGAAGCTAGAAAAATTAGAATCAAGAATAATAAGAGGACTGTTTTGTTTTTGGATGAGGTTCACAGGTTCAACAAATCCCAACAGGATTCCTTTTTGCCTGTCATTGAAGATGGAAGCATCATCTTCTTGGGTGCTACTACAGAGAATCCTTCTTTCCATTTGATCACTCCATTGTTGTCCAGATCTAGAGTTCTTACTCTTAACCCCTTGAAACCCCACCATGTTACTTTGATTTTGAAACGAGCTGTGGATGATTCTGATAAGGGATTAGCTCGAACTATTTCCATGGGTGTTCAAATTGGGGAGGATGCTATTGATTTCATAGCGGCTAATTGTGATGGCGATGCTAGGACTGCTTTGAATGCTTTGGAGATCTCTGCTATCACTGCTGCAGCTCGAACCAACTCCGTCCAAATTGACGATCGCAATGTAGAAGACCCCGATGAGAATACTACCAACTTCGAATCGTCTGTAGCTGTTGTTACTCTTGATGATGTAAAGGAGGCACTTCAATGTAAGCATATTGCTTATGATAAAGCAGGGGAAGAACACTACAATCTCATAAGTGCACTTCATAAATCCATGAGAGGATGTGATGCTGATGCTTCAATTTACTGGCTAGCAAGAATGTTGGAAGGTGGAGAACAGCCATTATATATAGCTAGGAGACTTGTAAGGTTTGCAAGCGAAGACGTCGGGTTAGCTGACCCATTAGCTCTCAATCAAGCTGTTTCTTGCTATCAAGCTTGCCACTTCATAGGCATGCCTGAGTGCAATGTCATTCTAGCTCAATGTGTCGCGTATTTAGCACTCGCACCGAAGTCGATTGCGGTGTATCGAGCAATGGGAGCTGCAGAGAAGGTAGTGAGGGAATCTGTTGGACAGAATGAGGGTGTGCCTCTACATTTGAGGAATGCTCCAACAAAGTTGATGAAGGAAATTGGATATGGGAAGGGATATATTTACACTCCGGATAATCCATCAGCAACACAAAGCTTTCTTCCACCTTCTCTTAAAGGATACAAATTTCTTAACTGGCCAGACTCGGAAGATACAAAAAAATGA

Coding sequence (CDS)

ATGCGACCTCGAACCATCGATGATGTGGTTGGCCAAGATCATCTACTAGCGAAGAATTCTATCCTTCGTTCTTCTCTGGATTGCAATCGGTTGCCTTCGATTGTCCTTTGGGGTCCACCTGGTACAGGTAAGACCTCCATTGCCAAAGCTATTGTTGGTTCTACTTCTTCTTTCTCTCAGTCTTTTCGATTTGTGTCTTTGTCTGCTGTTACTTCCGGCGTCAAGGACGTTAGGGATGCTGTTGAGGAAGCTAGAAAAATTAGAATCAAGAATAATAAGAGGACTGTTTTGTTTTTGGATGAGGTTCACAGGTTCAACAAATCCCAACAGGATTCCTTTTTGCCTGTCATTGAAGATGGAAGCATCATCTTCTTGGGTGCTACTACAGAGAATCCTTCTTTCCATTTGATCACTCCATTGTTGTCCAGATCTAGAGTTCTTACTCTTAACCCCTTGAAACCCCACCATGTTACTTTGATTTTGAAACGAGCTGTGGATGATTCTGATAAGGGATTAGCTCGAACTATTTCCATGGGTGTTCAAATTGGGGAGGATGCTATTGATTTCATAGCGGCTAATTGTGATGGCGATGCTAGGACTGCTTTGAATGCTTTGGAGATCTCTGCTATCACTGCTGCAGCTCGAACCAACTCCGTCCAAATTGACGATCGCAATGTAGAAGACCCCGATGAGAATACTACCAACTTCGAATCGTCTGTAGCTGTTGTTACTCTTGATGATGTAAAGGAGGCACTTCAATGTAAGCATATTGCTTATGATAAAGCAGGGGAAGAACACTACAATCTCATAAGTGCACTTCATAAATCCATGAGAGGATGTGATGCTGATGCTTCAATTTACTGGCTAGCAAGAATGTTGGAAGGTGGAGAACAGCCATTATATATAGCTAGGAGACTTGTAAGGTTTGCAAGCGAAGACGTCGGGTTAGCTGACCCATTAGCTCTCAATCAAGCTGTTTCTTGCTATCAAGCTTGCCACTTCATAGGCATGCCTGAGTGCAATGTCATTCTAGCTCAATGTGTCGCGTATTTAGCACTCGCACCGAAGTCGATTGCGGTGTATCGAGCAATGGGAGCTGCAGAGAAGGTAGTGAGGGAATCTGTTGGACAGAATGAGGGTGTGCCTCTACATTTGAGGAATGCTCCAACAAAGTTGATGAAGGAAATTGGATATGGGAAGGGATATATTTACACTCCGGATAATCCATCAGCAACACAAAGCTTTCTTCCACCTTCTCTTAAAGGATACAAATTTCTTAACTGGCCAGACTCGGAAGATACAAAAAAATGA

Protein sequence

MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQSFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDGSIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMGVQIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFESSVAVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARMLEGGEQPLYIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIAVYRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSATQSFLPPSLKGYKFLNWPDSEDTKK*
Homology
[Close]
BLAST of Csa4G056680 vs. Swiss-Prot
Match: WRIP1_RAT (ATPase WRNIP1 OS=Rattus norvegicus GN=Wrnip1 PE=1 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 1.3e-113
Identity = 222/440 (50.45%), Postives = 292/440 (66.36%), Query Frame = 1 

Query: 1   MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 60
           MRP T+ D +GQ   + + ++LRS L+ N +PS++LWGPPG GKT++A  I  + +S   
Sbjct: 226 MRPDTLQDYIGQSRAVGQETLLRSLLETNEIPSLILWGPPGCGKTTLAHII--ANNSKKH 285

Query: 61  SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 120
           S RFV+LSA  +   DVRD +++A+  +    ++T+LF+DE+HRFNKSQQD+FLP +E G
Sbjct: 286 SIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFIDEIHRFNKSQQDTFLPHVECG 345

Query: 121 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVD-------DSDKG-- 180
           +I  +GATTENPSF + T LLSR RV+ L  L    +  IL RA++       DS +   
Sbjct: 346 TITLIGATTENPSFQVNTALLSRCRVIVLEKLPVEAMVTILMRAINSLGIHVLDSSRPTD 405

Query: 181 -LARTISMG----VQIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNV 240
            L+ + +      V I + A+D +A   DGDART LN L+++ +   AR +S ++  +  
Sbjct: 406 PLSHSSNCSSEPSVFIEDKAVDTLAYLSDGDARTGLNGLQLAVL---ARLSSRKMFCK-- 465

Query: 241 EDPDENTTNFESSVAVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASI 300
               ++   +  S  ++T +DVKE LQ  HI YD+AGEEHYN ISALHK+MRG D +AS+
Sbjct: 466 ----KSGQTYSPSRVLITENDVKEGLQRSHILYDRAGEEHYNCISALHKAMRGSDQNASL 525

Query: 301 YWLARMLEGGEQPLYIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQ 360
           YWLARMLEGGE PLY+ARRLVRFASED+GLADP AL QAV+ YQ CHFIGMPEC V+LAQ
Sbjct: 526 YWLARMLEGGEDPLYVARRLVRFASEDIGLADPSALAQAVAAYQGCHFIGMPECEVLLAQ 585

Query: 361 CVAYLALAPKSIAVYRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTP 420
           CV Y A APKSI VY A    +  +R   G    VPLHLRNAPT+LMK++GYGKGY Y P
Sbjct: 586 CVVYFARAPKSIEVYSAYNNVKACLRSHQGPLPPVPLHLRNAPTRLMKDLGYGKGYKYNP 645

Query: 421 -DNPSATQSFLPPSLKGYKF 426
             +    Q +LP  L+G  F
Sbjct: 646 MYSEPVDQDYLPEELRGVDF 654

[Close]
BLAST of Csa4G056680 vs. Swiss-Prot
Match: WRIP1_MOUSE (ATPase WRNIP1 OS=Mus musculus GN=Wrnip1 PE=1 SV=2)

HSP 1 Score: 410.6 bits (1054), Expect = 2.1e-113
Identity = 221/440 (50.23%), Postives = 291/440 (66.14%), Query Frame = 1 

Query: 1   MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 60
           MRP T+ D +GQ   + + ++LRS L+ N +PS++LWGPPG GKT++A  I  + +S   
Sbjct: 226 MRPDTLQDYIGQSRAVGQETLLRSLLEANEIPSLILWGPPGCGKTTLAHII--ANNSKKH 285

Query: 61  SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 120
           S RFV+LSA  +   DVRD +++A+  +    ++T+LF+DE+HRFNKSQQD+FLP +E G
Sbjct: 286 SIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFIDEIHRFNKSQQDTFLPHVECG 345

Query: 121 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVD-------DSDKG-- 180
           +I  +GATTENPSF +   LLSR RV+ L  L    +  IL RA++       DS +   
Sbjct: 346 TITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAMVTILMRAINSLGIHVLDSSRPTD 405

Query: 181 -LARTISMG----VQIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNV 240
            L+ + +      V I + A+D +A   DGDART LN L+++ +   AR +S ++  +  
Sbjct: 406 PLSHSSNCSSEPSVFIEDKAVDTLAYLSDGDARTGLNGLQLAVL---ARLSSRKVFCK-- 465

Query: 241 EDPDENTTNFESSVAVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASI 300
               ++   +  S  ++T +DVKE LQ  HI YD+AGEEHYN ISALHK+MRG D +AS+
Sbjct: 466 ----KSGQTYSPSRVLITENDVKEGLQRSHILYDRAGEEHYNCISALHKAMRGSDQNASL 525

Query: 301 YWLARMLEGGEQPLYIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQ 360
           YWLARMLEGGE PLY+ARRLVRFASED+GLADP AL QAV+ YQ CHFIGMPEC V+LAQ
Sbjct: 526 YWLARMLEGGEDPLYVARRLVRFASEDIGLADPSALAQAVAAYQGCHFIGMPECEVLLAQ 585

Query: 361 CVAYLALAPKSIAVYRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTP 420
           CV Y A APKSI VY A    +  +R   G    VPLHLRNAPT+LMK++GYGKGY Y P
Sbjct: 586 CVVYFARAPKSIEVYSAYNNVKACLRSHQGPLPPVPLHLRNAPTRLMKDLGYGKGYKYNP 645

Query: 421 -DNPSATQSFLPPSLKGYKF 426
             +    Q +LP  L+G  F
Sbjct: 646 MYSEPVDQDYLPEELRGVDF 654

[Close]
BLAST of Csa4G056680 vs. Swiss-Prot
Match: WRIP1_HUMAN (ATPase WRNIP1 OS=Homo sapiens GN=WRNIP1 PE=1 SV=2)

HSP 1 Score: 408.3 bits (1048), Expect = 1.1e-112
Identity = 220/440 (50.00%), Postives = 292/440 (66.36%), Query Frame = 1 

Query: 1   MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 60
           MRP T+ D  GQ   + ++++LRS L+ N +PS++LWGPPG GKT++A  I  +++S   
Sbjct: 231 MRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHII--ASNSKKH 290

Query: 61  SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 120
           S RFV+LSA  +   DVRD +++A+  +    ++T+LF+DE+HRFNKSQQD+FLP +E G
Sbjct: 291 SIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFIDEIHRFNKSQQDTFLPHVECG 350

Query: 121 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVD-------DSDKG-- 180
           +I  +GATTENPSF +   LLSR RV+ L  L    +  IL RA++       DS +   
Sbjct: 351 TITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAMVTILMRAINSLGIHVLDSSRPTD 410

Query: 181 -LARTISMGVQ----IGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNV 240
            L+ + +   +    I + A+D +A   DGDAR  LN L+++ +   AR +S ++  +  
Sbjct: 411 PLSHSSNSSSEPAMFIEDKAVDTLAYLSDGDARAGLNGLQLAVL---ARLSSRKMFCK-- 470

Query: 241 EDPDENTTNFESSVAVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASI 300
               ++  ++  S  ++T +DVKE LQ  HI YD+AGEEHYN ISALHKSMRG D +AS+
Sbjct: 471 ----KSGQSYSPSRVLITENDVKEGLQRSHILYDRAGEEHYNCISALHKSMRGSDQNASL 530

Query: 301 YWLARMLEGGEQPLYIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQ 360
           YWLARMLEGGE PLY+ARRLVRFASED+GLADP AL QAV+ YQ CHFIGMPEC V+LAQ
Sbjct: 531 YWLARMLEGGEDPLYVARRLVRFASEDIGLADPSALTQAVAAYQGCHFIGMPECEVLLAQ 590

Query: 361 CVAYLALAPKSIAVYRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTP 420
           CV Y A APKSI VY A    +  +R   G    VPLHLRNAPT+LMK++GYGKGY Y P
Sbjct: 591 CVVYFARAPKSIEVYSAYNNVKACLRNHQGPLPPVPLHLRNAPTRLMKDLGYGKGYKYNP 650

Query: 421 -DNPSATQSFLPPSLKGYKF 426
             +    Q +LP  L+G  F
Sbjct: 651 MYSEPVDQEYLPEELRGVDF 659

[Close]
BLAST of Csa4G056680 vs. Swiss-Prot
Match: WRIP1_SCHPO (ATPase WRNIP1 homolog C26H5.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC26H5.02c PE=3 SV=2)

HSP 1 Score: 326.2 bits (835), Expect = 5.3e-88
Identity = 182/432 (42.13%), Postives = 257/432 (59.49%), Query Frame = 1 

Query: 2   RPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQS 61
           RP+++D+ VGQ+ L+ +  I+R+ ++ +R  S++LWG  GTGKT++A+ I  +T S    
Sbjct: 91  RPKSLDEYVGQEELVGERGIIRNLIEQDRCNSMILWGSAGTGKTTLARLIAVTTKS---- 150

Query: 62  FRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDGS 121
            RF+ +SA ++ V D R   E+++       ++T++FLDEVHRFN++QQD FLP++E G 
Sbjct: 151 -RFIEISATSTTVADCRKIFEDSQNYLTLTGRKTIIFLDEVHRFNRAQQDIFLPMVEKGL 210

Query: 122 IIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMGVQ 181
           +  +GATTENPSF L + L+SR  V  L  L   +V  IL  A     + L  ++     
Sbjct: 211 VTLIGATTENPSFRLNSALISRCPVFVLKKLTRDNVKKILNHACLLESERLGSSMP---N 270

Query: 182 IGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFESSVA 241
           +    ID+I+A  DGDAR ALNALE+S                                 
Sbjct: 271 VETSIIDYISAITDGDARMALNALEMSIGMLRQ--------------------------G 330

Query: 242 VVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARMLEGGEQPLY 301
            ++L+D+K+ L      YD+ G+ HY+ ISA HKS+RG D DA++Y+L RMLE GE PLY
Sbjct: 331 PLSLEDIKDKLVRSSALYDRVGDVHYDTISAFHKSVRGSDVDATLYYLGRMLESGEDPLY 390

Query: 302 IARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIAVY 361
           +ARR+VR ASED+G+AD   L  A S + A   +GMPE +VILA C   LALAPKS+ VY
Sbjct: 391 VARRMVRIASEDIGIADNSMLPLASSTFTAVQQVGMPEADVILAHCAVALALAPKSVDVY 450

Query: 362 RAMGAAEKVV--RESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPD--NPSATQSFLP 421
           R+  A +  +      G+ E +P+H+RNAPT LMK++GY KGY Y PD  +    Q +LP
Sbjct: 451 RSYNAVKSFLSSHPDAGRAE-IPMHIRNAPTNLMKQLGYHKGYKYNPDYKDGLVMQEYLP 487

Query: 422 PSLKGYKFLNWP 430
            S+KG KF   P
Sbjct: 511 DSIKGTKFYKLP 487

[Close]
BLAST of Csa4G056680 vs. Swiss-Prot
Match: WRIP1_DICDI (ATPase WRNIP1 OS=Dictyostelium discoideum GN=wrnip1 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 3.4e-87
Identity = 187/433 (43.19%), Postives = 263/433 (60.74%), Query Frame = 1 

Query: 1   MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 60
           MRP  + D +GQ+ LL  + I++       LPS +L+GPPG GKT++A+ IV S S+++ 
Sbjct: 201 MRPTELSDFIGQESLLVGDPIVKKLFQSPELPSFILYGPPGCGKTTLAQ-IVASKSNYNI 260

Query: 61  SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 120
           +    +LSAV SGVKD+++ +++AR   ++  K+T+LF+DE+HR+NK QQD  LP IE G
Sbjct: 261 N----ALSAVGSGVKDIKEVIDKARNT-LQFGKKTILFIDEIHRYNKLQQDVLLPAIESG 320

Query: 121 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMGV 180
            II +GATTENPSF L   LLSR +V  +  L   ++  ++KR ++ +   + R + M  
Sbjct: 321 IIILIGATTENPSFELNGALLSRCKVFKMEKLTKENLETLIKRTLEVTPLLMDRRLIMD- 380

Query: 181 QIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFESSV 240
              EDAI  +A   DGDAR A+N L++     A + N  +   +   +   +T+     +
Sbjct: 381 ---EDAIKSLAEIADGDARVAINVLDM-----AIKANKEEQTYKERMEEKHSTSGIVRDI 440

Query: 241 AVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARMLEGGEQPL 300
            V+T   +   LQ   + YDK G+  Y LISALHKS+RG DA+A+ YW+ RMLE G +PL
Sbjct: 441 -VLTKKQMGSLLQRTSLIYDKGGDAFYELISALHKSVRGSDANATAYWVIRMLESGCEPL 500

Query: 301 YIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIAV 360
           YI RR+VR ASED+GLAD  AL  A++ YQA HF+GMPEC   + QC  YLA A KS   
Sbjct: 501 YIVRRMVRMASEDIGLADNSALPLAIAAYQAVHFVGMPECTNAILQCAVYLANAAKS--- 560

Query: 361 YRAMGAAEKVVRESVGQNEG--VPLHLRNAPTKLMKEIGYGKGYIYT---PDNPSATQSF 420
             +        RE + ++EG  VP+HLRNAPTK+MK+ GYG  Y Y     D    TQ +
Sbjct: 561 -NSCDHWYAHTREYLEKHEGPPVPIHLRNAPTKMMKDWGYGADYQYNHAFDDQSQVTQIY 613

Query: 421 LPPSLKGYKFLNW 429
           LP  +K  KF  +
Sbjct: 621 LPEPIKNEKFFEY 613

[Close]
BLAST of Csa4G056680 vs. TrEMBL
Match: A0A0A0KVA4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056680 PE=4 SV=1)

HSP 1 Score: 864.4 bits (2232), Expect = 6.0e-248
Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 1 

Query: 1   MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 60
           MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ
Sbjct: 1   MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 60

Query: 61  SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 120
           SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG
Sbjct: 61  SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 120

Query: 121 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMGV 180
           SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMGV
Sbjct: 121 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMGV 180

Query: 181 QIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFESSV 240
           QIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFESSV
Sbjct: 181 QIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFESSV 240

Query: 241 AVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARMLEGGEQPL 300
           AVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARMLEGGEQPL
Sbjct: 241 AVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARMLEGGEQPL 300

Query: 301 YIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIAV 360
           YIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIAV
Sbjct: 301 YIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIAV 360

Query: 361 YRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSATQSFLPPSL 420
           YRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSATQSFLPPSL
Sbjct: 361 YRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSATQSFLPPSL 420

Query: 421 KGYKFLNWPDSEDTKK 437
           KGYKFLNWPDSEDTKK
Sbjct: 421 KGYKFLNWPDSEDTKK 436

[Close]
BLAST of Csa4G056680 vs. TrEMBL
Match: A0A059DDU6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00951 PE=4 SV=1)

HSP 1 Score: 686.8 bits (1771), Expect = 1.7e-194
Identity = 343/444 (77.25%), Postives = 387/444 (87.16%), Query Frame = 1 

Query: 1   MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 60
           MRPRT+DDVVGQ+HLL  +S+LRS++  +RLPSIVLWGPPGTGKTSIAKAI  S+S  S 
Sbjct: 155 MRPRTVDDVVGQEHLLGGSSLLRSAIAADRLPSIVLWGPPGTGKTSIAKAITNSSSRGSV 214

Query: 61  SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 120
            +RF SLSAVT GVK+VRDAVEEARK R+K N+RTVLF+DEVHRFNKSQQDSFLPVIEDG
Sbjct: 215 -YRFTSLSAVTCGVKEVRDAVEEARKARVKGNRRTVLFVDEVHRFNKSQQDSFLPVIEDG 274

Query: 121 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMGV 180
           SI+F+GATTENPSFHLITPLLSR RVLTLNPLKPHH+  +L+RA+ DS+KGLAR++ M V
Sbjct: 275 SIVFMGATTENPSFHLITPLLSRCRVLTLNPLKPHHIVSLLERAIGDSEKGLARSVDMNV 334

Query: 181 QIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQI--------DDRNVEDPDEN 240
           +  EDA++F++ NCDGDAR ALNALEISAITAA R +  Q+         D N+    EN
Sbjct: 335 EAKEDAVEFLSTNCDGDARVALNALEISAITAATRVSKQQLKLKGGSESSDGNLLADVEN 394

Query: 241 TTNFESSVAVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARM 300
                 + A+VTLDDVKEALQCKH+AYDKAG+EHYNLISALHKSMRG DA+A+IYWLARM
Sbjct: 395 --GIGPTAAIVTLDDVKEALQCKHLAYDKAGDEHYNLISALHKSMRGSDANAAIYWLARM 454

Query: 301 LEGGEQPLYIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLA 360
           LEGGEQPLYIARRL+RFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLA
Sbjct: 455 LEGGEQPLYIARRLIRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLA 514

Query: 361 LAPKSIAVYRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSAT 420
           LAPKSIAVYRAMGAA+K VRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPD+P A 
Sbjct: 515 LAPKSIAVYRAMGAAQKAVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDDPQAA 574

Query: 421 QSFLPPSLKGYKFLNWPDSEDTKK 437
           QS+LPPSL+GYKFL+WP +   +K
Sbjct: 575 QSYLPPSLQGYKFLDWPSTNTHEK 595

[Close]
BLAST of Csa4G056680 vs. TrEMBL
Match: G7KFD2_MEDTR (AAA family ATPase OS=Medicago truncatula GN=MTR_5g098850 PE=4 SV=1)

HSP 1 Score: 680.2 bits (1754), Expect = 1.6e-192
Identity = 341/443 (76.98%), Postives = 389/443 (87.81%), Query Frame = 1 

Query: 1   MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 60
           +RPRT+D+VVGQDHLL+ NSILRSS+   RLPSI+LWGPPGTGKT+IAKAIV S+S+   
Sbjct: 120 LRPRTLDEVVGQDHLLSTNSILRSSIQRKRLPSILLWGPPGTGKTTIAKAIVNSSSTTKD 179

Query: 61  S--FRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIE 120
           S  +RFVSLSAVTSGVKDVR+AV+EARK+R+K N+ TVLF+DEVHRFNKSQQDSFLPVIE
Sbjct: 180 SPLYRFVSLSAVTSGVKDVREAVDEARKVRVKTNQTTVLFVDEVHRFNKSQQDSFLPVIE 239

Query: 121 DGSIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISM 180
           DGSI+F+GATTENPSFHLITPLLSR RVLTLNPL+PHH+ L+LKRAV+D++KGL +++  
Sbjct: 240 DGSIVFVGATTENPSFHLITPLLSRCRVLTLNPLQPHHLILLLKRAVNDTEKGLVKSLGF 299

Query: 181 G-----VQIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENT 240
           G     V +GED +DF+A NCDGDAR ALN LEI+ + AAAR   V+ D    +D     
Sbjct: 300 GSCKVDVSVGEDVVDFVANNCDGDARVALNVLEIAGVNAAAR---VEHDSEECQD----- 359

Query: 241 TNFESSVAV-VTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARM 300
                 VAV V+++D KEALQCKH+AYDKAGEEHYNLISALHKSMRG DADA+IYWLARM
Sbjct: 360 ------VAVSVSVEDAKEALQCKHLAYDKAGEEHYNLISALHKSMRGSDADAAIYWLARM 419

Query: 301 LEGGEQPLYIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLA 360
           L+GGE+PLYIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLA
Sbjct: 420 LKGGEEPLYIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLA 479

Query: 361 LAPKSIAVYRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSAT 420
           LAPKSIAVYRAMGAAEK VRESVGQNEGVPLHLRNAPTKLMKE+GYGKGYIYTPDNPSAT
Sbjct: 480 LAPKSIAVYRAMGAAEKAVRESVGQNEGVPLHLRNAPTKLMKEVGYGKGYIYTPDNPSAT 539

Query: 421 QSFLPPSLKGYKFLNWPDSEDTK 436
           QSFLPPSL+G+KFL+WPD + ++
Sbjct: 540 QSFLPPSLQGFKFLHWPDRDPSE 548

[Close]
BLAST of Csa4G056680 vs. TrEMBL
Match: A0A067E4V2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008664mg PE=4 SV=1)

HSP 1 Score: 679.9 bits (1753), Expect = 2.1e-192
Identity = 337/437 (77.12%), Postives = 386/437 (88.33%), Query Frame = 1 

Query: 1   MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 60
           MRP  I+DVVGQDHLL+ NS+LRS++  NRLPSI+ WGPPGTGKT++AKAIV S +    
Sbjct: 128 MRPVNINDVVGQDHLLSPNSLLRSAVCSNRLPSIIFWGPPGTGKTTLAKAIVNSVAV--- 187

Query: 61  SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 120
           S++FV LSAVTSGVKDVRDAVE+ARK+R+K+NKRTVLF+DEVHRFNKSQQDSFLPVIEDG
Sbjct: 188 SYKFVCLSAVTSGVKDVRDAVEDARKLRVKSNKRTVLFVDEVHRFNKSQQDSFLPVIEDG 247

Query: 121 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTIS-MG 180
           SI+F+GATTENPSFHLITPLLSR RVLTLNPLKPH V ++LKRAVDD + GL++++    
Sbjct: 248 SIVFIGATTENPSFHLITPLLSRCRVLTLNPLKPHDVEILLKRAVDDVNNGLSKSVGGTR 307

Query: 181 VQIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFESS 240
           V++  DAI+F+ +NCDGDAR ALNALEISAITAA R    ++ +   ED  +  + +   
Sbjct: 308 VEVNHDAIEFLCSNCDGDARVALNALEISAITAAVRVPVKEVKEVEQEDESDGCSPY--- 367

Query: 241 VAVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARMLEGGEQP 300
           VA+VTLDD KEA QCKH+AYD+AGEEHYNLISALHKSMRG DADA+IYWLARMLEGGEQP
Sbjct: 368 VALVTLDDAKEAFQCKHLAYDRAGEEHYNLISALHKSMRGNDADAAIYWLARMLEGGEQP 427

Query: 301 LYIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIA 360
           LYIARRLVRFASEDVGLADPLALNQAVSCYQACHF+GMPECNVILAQCVAYLALAPKSI+
Sbjct: 428 LYIARRLVRFASEDVGLADPLALNQAVSCYQACHFLGMPECNVILAQCVAYLALAPKSIS 487

Query: 361 VYRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSATQSFLPPS 420
           +YRA+GAA+KV+RESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPD+PSA QSFLPPS
Sbjct: 488 IYRALGAAQKVIRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDDPSAKQSFLPPS 547

Query: 421 LKGYKFLNWPDSEDTKK 437
           L+GYKFL+WP S  T K
Sbjct: 548 LEGYKFLDWPKSNTTDK 558

[Close]
BLAST of Csa4G056680 vs. TrEMBL
Match: V4SQQ8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011398mg PE=4 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 3.0e-191
Identity = 334/437 (76.43%), Postives = 387/437 (88.56%), Query Frame = 1 

Query: 1   MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 60
           MRP  I+DVVGQDHLL+ NS+LRS++  NRLPSI+ WGPPGTGKT++AKAIV S +    
Sbjct: 128 MRPVNINDVVGQDHLLSPNSLLRSAVCSNRLPSIIFWGPPGTGKTTLAKAIVNSVAV--- 187

Query: 61  SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 120
           S++FV LSAVTSGVKDVRDAVE+ARK+R+K++KRTVLF+DEVHRFNKSQQDSFLPVIEDG
Sbjct: 188 SYKFVCLSAVTSGVKDVRDAVEDARKLRVKSSKRTVLFVDEVHRFNKSQQDSFLPVIEDG 247

Query: 121 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTIS-MG 180
           SI+F+GATTENPSFHLITPLLSR RVLTLNPLKPHH+ ++LK+AVDD + GL++++    
Sbjct: 248 SIVFIGATTENPSFHLITPLLSRCRVLTLNPLKPHHIEILLKKAVDDVNNGLSKSVGGTR 307

Query: 181 VQIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFESS 240
           V++  DAI+F+ +N DGDAR ALNALEISAITAA R    ++ +   ED  +  + +   
Sbjct: 308 VEVNHDAIEFLCSNGDGDARVALNALEISAITAAVRVPVKEVKEVEQEDESDGCSPY--- 367

Query: 241 VAVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARMLEGGEQP 300
           VA+VTLDD KEA QCKH+AYD+AGEEHYNLISALHKSMRG DADA+IYWLARMLEGGEQP
Sbjct: 368 VALVTLDDAKEAFQCKHLAYDRAGEEHYNLISALHKSMRGNDADAAIYWLARMLEGGEQP 427

Query: 301 LYIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIA 360
           LYIARRLVRFASEDVGLADPLALNQAVSCYQACHF+GMPECNVILAQCVAYLALAPKSI+
Sbjct: 428 LYIARRLVRFASEDVGLADPLALNQAVSCYQACHFLGMPECNVILAQCVAYLALAPKSIS 487

Query: 361 VYRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSATQSFLPPS 420
           +YRA+GAA+KV+RESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPD+PSA QSFLPPS
Sbjct: 488 IYRALGAAQKVIRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDDPSAKQSFLPPS 547

Query: 421 LKGYKFLNWPDSEDTKK 437
           L+GYKFL+WP+S  T K
Sbjct: 548 LEGYKFLDWPNSNTTDK 558

[Close]
BLAST of Csa4G056680 vs. TAIR10
Match: AT1G24290.1 (AT1G24290.1 AAA-type ATPase family protein)

HSP 1 Score: 614.0 bits (1582), Expect = 7.2e-176
Identity = 308/432 (71.30%), Postives = 360/432 (83.33%), Query Frame = 1 

Query: 1   MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 60
           MRPRT+DDVVGQDHLL+ +S+LRS+++ NRLPSIV WGPPGTGKTSIAK+++ S+   S 
Sbjct: 107 MRPRTLDDVVGQDHLLSPSSLLRSAVESNRLPSIVFWGPPGTGKTSIAKSLINSSKDPSL 166

Query: 61  SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 120
            +RFVSLSAVTSGVKDVRDAVE A+++ ++  KRTVLF+DEVHRFNKSQQD+FLPVIEDG
Sbjct: 167 -YRFVSLSAVTSGVKDVRDAVESAKRLNLEGRKRTVLFMDEVHRFNKSQQDTFLPVIEDG 226

Query: 121 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMGV 180
           SI+F+GATTENPSFHLITPLLSR RVLTLNPLKP+HV  +L+RAVDDS++GL  +    V
Sbjct: 227 SILFIGATTENPSFHLITPLLSRCRVLTLNPLKPNHVETLLRRAVDDSERGLPNS----V 286

Query: 181 QIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFESSV 240
           ++ +  I+F+A NCDGDAR ALNALEISA  A  R  +                      
Sbjct: 287 EVDDSVIEFLANNCDGDARVALNALEISATMATTRAGTD--------------------- 346

Query: 241 AVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARMLEGGEQPL 300
           AVV++DD KEALQCKH+AYDKAGE+HYNLISALHKSMRG DA+A+IYWLARMLEGGE+PL
Sbjct: 347 AVVSIDDAKEALQCKHLAYDKAGEQHYNLISALHKSMRGGDANAAIYWLARMLEGGEEPL 406

Query: 301 YIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIAV 360
           YIARRL+RFASED+GLADP AL QAV+CYQA HF+GMPECNVILAQC AYLALAPKSIAV
Sbjct: 407 YIARRLIRFASEDIGLADPSALTQAVACYQASHFLGMPECNVILAQCTAYLALAPKSIAV 466

Query: 361 YRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPS--ATQSFLPP 420
           YRA+GAA+KVV++SVGQNEGVPLHLRNAPTKLMKE+GYGK YIY P +PS  A Q++LPP
Sbjct: 467 YRAIGAAQKVVKDSVGQNEGVPLHLRNAPTKLMKELGYGKEYIYPPSDPSSAAGQTYLPP 512

Query: 421 SLKGYKFLNWPD 431
           SL  +KFL WP+
Sbjct: 527 SLLHHKFLEWPE 512

[Close]
BLAST of Csa4G056680 vs. TAIR10
Match: AT1G77470.1 (AT1G77470.1 replication factor C subunit 3)

HSP 1 Score: 58.9 bits (141), Expect = 8.9e-09
Identity = 62/238 (26.05%), Postives = 100/238 (42.02%), Query Frame = 1 

Query: 2   RPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQS 61
           RP+++DDV     ++     L +    N+LP ++L+GPPGTGKTS   A+  +   +   
Sbjct: 46  RPQSLDDVAAHRDIIDTIDRLTNE---NKLPHLLLYGPPGTGKTSTILAV--ARKLYGPK 105

Query: 62  FRFVSLSAVTS---GVKDVRDAVEE---ARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLP 121
           +R + L    S   G+  VR  +++    +   +  +   ++ LDE     K  Q +   
Sbjct: 106 YRNMILELNASDDRGIDVVRQQIQDFASTQSFSLGKSSVKLVLLDEADAMTKDAQFALRR 165

Query: 122 VIEDGSIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDD-----SDK 181
           VIE  +     A   N    +I  L SR       PL   H++  LK  ++      SD 
Sbjct: 166 VIEKYTKSTRFALIGNHVNKIIPALQSRCTRFRFAPLDGVHMSQRLKHVIEAERLVVSDC 225

Query: 182 GLARTISMGVQIGEDAIDFIAANCDGDARTALNALEISAITAAART--NSVQIDDRNV 227
           GLA  + +                +GD R ALN L+ + + +   T   S QI + +V
Sbjct: 226 GLAALVRLS---------------NGDMRKALNILQSTHMASKEITEEESKQITEEDV 263

[Close]
BLAST of Csa4G056680 vs. TAIR10
Match: AT1G63160.1 (AT1G63160.1 replication factor C 2)

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-08
Identity = 49/208 (23.56%), Postives = 86/208 (41.35%), Query Frame = 1 

Query: 2   RPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQS 61
           RP  + D+VG +  +++  ++        +P+++L GPPGTGKT+   A+       +  
Sbjct: 22  RPSKVVDIVGNEDAVSRLQVIARD---GNMPNLILSGPPGTGKTTSILALAHELLGTNYK 81

Query: 62  FRFVSLSAVTS-GVKDVRDAVE--EARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIE 121
              + L+A    G+  VR+ ++    +K+ +   +  V+ LDE        Q +    IE
Sbjct: 82  EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALRRTIE 141

Query: 122 DGSIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISM 181
             S     A   N S  +I P+ SR  ++  + L    +            + L    + 
Sbjct: 142 IYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQIL----------GRLLVVVAAE 201

Query: 182 GVQIGEDAIDFIAANCDGDARTALNALE 207
            V    + ++ I    DGD R ALN L+
Sbjct: 202 KVPYVPEGLEAIIFTADGDMRQALNNLQ 216

[Close]
BLAST of Csa4G056680 vs. TAIR10
Match: AT1G21690.3 (AT1G21690.3 ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-06
Identity = 64/282 (22.70%), Postives = 114/282 (40.43%), Query Frame = 1 

Query: 2   RPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGST-SSFSQ 61
           RP+ + DV  Q+ ++    +L ++L     P ++ +GPPGTGKT+ A AI          
Sbjct: 16  RPKQVKDVAHQEEVVR---VLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGPELY 75

Query: 62  SFRFVSLSAVTS-GVKDVRDAVEEARKIRIKNNKR---------TVLFLDEVHRFNKSQQ 121
             R + L+A    G+  VR  +++   + + +N R          ++ LDE     +  Q
Sbjct: 76  KSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTEDAQ 135

Query: 122 DSFLPVIEDGSIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDK 181
           ++    +E  S +       N    +I PL SR       PL    +          S++
Sbjct: 136 NALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVM----------SNR 195

Query: 182 GLARTISMGVQIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPD 241
            L      G+ +  +A+  +++   GD R A+  L+     +A R     I         
Sbjct: 196 ILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQ-----SATRLFGSTI--------- 255

Query: 242 ENTTNFESSVAVVTLDDVKEAL-QCKHIAYDKAGEEHYNLIS 272
             +T+  +   VV L+ V +    CK   +D A +E  N+++
Sbjct: 256 -TSTDLLNVSGVVPLEVVNKLFTACKSGDFDIANKEVDNIVA 269

[Close]
BLAST of Csa4G056680 vs. NCBI nr
Match: gi|778691246|ref|XP_011653247.1| (PREDICTED: LOW QUALITY PROTEIN: ATPase WRNIP1 [Cucumis sativus])

HSP 1 Score: 864.4 bits (2232), Expect = 8.6e-248
Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 1 

Query: 1   MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 60
           MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ
Sbjct: 129 MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 188

Query: 61  SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 120
           SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG
Sbjct: 189 SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 248

Query: 121 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMGV 180
           SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMGV
Sbjct: 249 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMGV 308

Query: 181 QIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFESSV 240
           QIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFESSV
Sbjct: 309 QIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFESSV 368

Query: 241 AVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARMLEGGEQPL 300
           AVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARMLEGGEQPL
Sbjct: 369 AVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARMLEGGEQPL 428

Query: 301 YIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIAV 360
           YIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIAV
Sbjct: 429 YIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIAV 488

Query: 361 YRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSATQSFLPPSL 420
           YRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSATQSFLPPSL
Sbjct: 489 YRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSATQSFLPPSL 548

Query: 421 KGYKFLNWPDSEDTKK 437
           KGYKFLNWPDSEDTKK
Sbjct: 549 KGYKFLNWPDSEDTKK 564

[Close]
BLAST of Csa4G056680 vs. NCBI nr
Match: gi|700198320|gb|KGN53478.1| (hypothetical protein Csa_4G056680 [Cucumis sativus])

HSP 1 Score: 864.4 bits (2232), Expect = 8.6e-248
Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 1 

Query: 1   MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 60
           MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ
Sbjct: 1   MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 60

Query: 61  SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 120
           SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG
Sbjct: 61  SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 120

Query: 121 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMGV 180
           SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMGV
Sbjct: 121 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMGV 180

Query: 181 QIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFESSV 240
           QIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFESSV
Sbjct: 181 QIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFESSV 240

Query: 241 AVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARMLEGGEQPL 300
           AVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARMLEGGEQPL
Sbjct: 241 AVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARMLEGGEQPL 300

Query: 301 YIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIAV 360
           YIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIAV
Sbjct: 301 YIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIAV 360

Query: 361 YRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSATQSFLPPSL 420
           YRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSATQSFLPPSL
Sbjct: 361 YRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSATQSFLPPSL 420

Query: 421 KGYKFLNWPDSEDTKK 437
           KGYKFLNWPDSEDTKK
Sbjct: 421 KGYKFLNWPDSEDTKK 436

[Close]
BLAST of Csa4G056680 vs. NCBI nr
Match: gi|659101966|ref|XP_008451883.1| (PREDICTED: ATPase WRNIP1 [Cucumis melo])

HSP 1 Score: 845.9 bits (2184), Expect = 3.2e-242
Identity = 426/436 (97.71%), Postives = 431/436 (98.85%), Query Frame = 1 

Query: 1   MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 60
           MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ
Sbjct: 107 MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 166

Query: 61  SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 120
           SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG
Sbjct: 167 SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 226

Query: 121 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMGV 180
           SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHV LILKRAVDDSDKGLART+SMGV
Sbjct: 227 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVALILKRAVDDSDKGLARTVSMGV 286

Query: 181 QIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFESSV 240
           QIGEDAIDFIAA+CDGDARTALNALEISAITAA+R+NS QIDDRNVEDPD NTTN ESSV
Sbjct: 287 QIGEDAIDFIAAHCDGDARTALNALEISAITAASRSNSAQIDDRNVEDPDGNTTNVESSV 346

Query: 241 AVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARMLEGGEQPL 300
           AVVTLDDVKEALQCKH+AYDKAGEEHYNLISALHKSMRG DADASIYWLARMLEGGEQPL
Sbjct: 347 AVVTLDDVKEALQCKHLAYDKAGEEHYNLISALHKSMRGSDADASIYWLARMLEGGEQPL 406

Query: 301 YIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIAV 360
           YIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIAV
Sbjct: 407 YIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIAV 466

Query: 361 YRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSATQSFLPPSL 420
           YRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSATQSFLPPSL
Sbjct: 467 YRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSATQSFLPPSL 526

Query: 421 KGYKFLNWPDSEDTKK 437
           KGYKFLNWPDSEDTKK
Sbjct: 527 KGYKFLNWPDSEDTKK 542

[Close]
BLAST of Csa4G056680 vs. NCBI nr
Match: gi|702240500|ref|XP_010045138.1| (PREDICTED: ATPase WRNIP1 [Eucalyptus grandis])

HSP 1 Score: 686.8 bits (1771), Expect = 2.5e-194
Identity = 343/444 (77.25%), Postives = 387/444 (87.16%), Query Frame = 1 

Query: 1   MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 60
           MRPRT+DDVVGQ+HLL  +S+LRS++  +RLPSIVLWGPPGTGKTSIAKAI  S+S  S 
Sbjct: 155 MRPRTVDDVVGQEHLLGGSSLLRSAIAADRLPSIVLWGPPGTGKTSIAKAITNSSSRGSV 214

Query: 61  SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 120
            +RF SLSAVT GVK+VRDAVEEARK R+K N+RTVLF+DEVHRFNKSQQDSFLPVIEDG
Sbjct: 215 -YRFTSLSAVTCGVKEVRDAVEEARKARVKGNRRTVLFVDEVHRFNKSQQDSFLPVIEDG 274

Query: 121 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMGV 180
           SI+F+GATTENPSFHLITPLLSR RVLTLNPLKPHH+  +L+RA+ DS+KGLAR++ M V
Sbjct: 275 SIVFMGATTENPSFHLITPLLSRCRVLTLNPLKPHHIVSLLERAIGDSEKGLARSVDMNV 334

Query: 181 QIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQI--------DDRNVEDPDEN 240
           +  EDA++F++ NCDGDAR ALNALEISAITAA R +  Q+         D N+    EN
Sbjct: 335 EAKEDAVEFLSTNCDGDARVALNALEISAITAATRVSKQQLKLKGGSESSDGNLLADVEN 394

Query: 241 TTNFESSVAVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARM 300
                 + A+VTLDDVKEALQCKH+AYDKAG+EHYNLISALHKSMRG DA+A+IYWLARM
Sbjct: 395 --GIGPTAAIVTLDDVKEALQCKHLAYDKAGDEHYNLISALHKSMRGSDANAAIYWLARM 454

Query: 301 LEGGEQPLYIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLA 360
           LEGGEQPLYIARRL+RFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLA
Sbjct: 455 LEGGEQPLYIARRLIRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLA 514

Query: 361 LAPKSIAVYRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSAT 420
           LAPKSIAVYRAMGAA+K VRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPD+P A 
Sbjct: 515 LAPKSIAVYRAMGAAQKAVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDDPQAA 574

Query: 421 QSFLPPSLKGYKFLNWPDSEDTKK 437
           QS+LPPSL+GYKFL+WP +   +K
Sbjct: 575 QSYLPPSLQGYKFLDWPSTNTHEK 595

[Close]
BLAST of Csa4G056680 vs. NCBI nr
Match: gi|985470050|ref|XP_015380894.1| (PREDICTED: ATPase WRNIP1 [Citrus sinensis])

HSP 1 Score: 684.1 bits (1764), Expect = 1.6e-193
Identity = 338/437 (77.35%), Postives = 387/437 (88.56%), Query Frame = 1 

Query: 1   MRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQ 60
           MRP  I+DVVGQDHLL+ NS+LRS++  NRLPSI+ WGPPGTGKT++AKAIV S +    
Sbjct: 128 MRPVNINDVVGQDHLLSPNSLLRSAVCSNRLPSIIFWGPPGTGKTTLAKAIVNSVAV--- 187

Query: 61  SFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDG 120
           S++FV LSAVTSGVKDVRDAVE+ARK+R+K+NKRTVLF+DEVHRFNKSQQDSFLPVIEDG
Sbjct: 188 SYKFVCLSAVTSGVKDVRDAVEDARKLRVKSNKRTVLFVDEVHRFNKSQQDSFLPVIEDG 247

Query: 121 SIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTIS-MG 180
           SI+F+GATTENPSFHLITPLLSR RVLTLNPLKPHHV ++LKRAVDD + GL++++    
Sbjct: 248 SIVFIGATTENPSFHLITPLLSRCRVLTLNPLKPHHVEILLKRAVDDVNNGLSKSVGGTR 307

Query: 181 VQIGEDAIDFIAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFESS 240
           V++  DAI+F+ +NCDGDAR ALNALEISAITAA R    ++ +   ED  +  + +   
Sbjct: 308 VEVNHDAIEFLCSNCDGDARVALNALEISAITAAVRVPVKEVKEVEQEDESDGCSPY--- 367

Query: 241 VAVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADASIYWLARMLEGGEQP 300
           VA+VTLDD KEA QCKH+AYD+AGEEHYNLISALHKSMRG DADA+IYWLARMLEGGEQP
Sbjct: 368 VALVTLDDAKEAFQCKHLAYDRAGEEHYNLISALHKSMRGSDADAAIYWLARMLEGGEQP 427

Query: 301 LYIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIA 360
           LYIARRLVRFASEDVGLADPLALNQAVSCYQACHF+GMPECNVILAQCVAYLALAPKSI+
Sbjct: 428 LYIARRLVRFASEDVGLADPLALNQAVSCYQACHFLGMPECNVILAQCVAYLALAPKSIS 487

Query: 361 VYRAMGAAEKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDNPSATQSFLPPS 420
           +YRA+GAA+KV+RESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPD+PSA QSFLPPS
Sbjct: 488 IYRALGAAQKVIRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYTPDDPSAKQSFLPPS 547

Query: 421 LKGYKFLNWPDSEDTKK 437
           L+GYKFL+WP S  T K
Sbjct: 548 LEGYKFLDWPKSNTTDK 558

The following BLAST results are available for this feature:
BLAST of Csa4G056680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WRIP1_RAT1.3e-11350.45ATPase WRNIP1 OS=Rattus norvegicus GN=Wrnip1 PE=1 SV=1[more]
WRIP1_MOUSE2.1e-11350.23ATPase WRNIP1 OS=Mus musculus GN=Wrnip1 PE=1 SV=2[more]
WRIP1_HUMAN1.1e-11250.00ATPase WRNIP1 OS=Homo sapiens GN=WRNIP1 PE=1 SV=2[more]
WRIP1_SCHPO5.3e-8842.13ATPase WRNIP1 homolog C26H5.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC ... [more]
WRIP1_DICDI3.4e-8743.19ATPase WRNIP1 OS=Dictyostelium discoideum GN=wrnip1 PE=3 SV=1[more]
BLAST of Csa4G056680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVA4_CUCSA6.0e-248100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056680 PE=4 SV=1[more]
A0A059DDU6_EUCGR1.7e-19477.25Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00951 PE=4 SV=1[more]
G7KFD2_MEDTR1.6e-19276.98AAA family ATPase OS=Medicago truncatula GN=MTR_5g098850 PE=4 SV=1[more]
A0A067E4V2_CITSI2.1e-19277.12Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008664mg PE=4 SV=1[more]
V4SQQ8_9ROSI3.0e-19176.43Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011398mg PE=4 SV=1[more]
BLAST of Csa4G056680 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G24290.17.2e-17671.30 AAA-type ATPase family protein[more]
AT1G77470.18.9e-0926.05 replication factor C subunit 3[more]
AT1G63160.12.6e-0823.56 replication factor C 2[more]
AT1G21690.31.1e-0622.70 ATPase family associated with various cellular activities (AAA) [more]
BLAST of Csa4G056680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778691246|ref|XP_011653247.1|8.6e-248100.00PREDICTED: LOW QUALITY PROTEIN: ATPase WRNIP1 [Cucumis sativus][more]
gi|700198320|gb|KGN53478.1|8.6e-248100.00hypothetical protein Csa_4G056680 [Cucumis sativus][more]
gi|659101966|ref|XP_008451883.1|3.2e-24297.71PREDICTED: ATPase WRNIP1 [Cucumis melo][more]
gi|702240500|ref|XP_010045138.1|2.5e-19477.25PREDICTED: ATPase WRNIP1 [Eucalyptus grandis][more]
gi|985470050|ref|XP_015380894.1|1.6e-19377.35PREDICTED: ATPase WRNIP1 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR008921DNA_pol3_clamp-load_cplx_C
IPR021886MgsA_C
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0005515 protein binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU158706cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G056680.1Csa4G056680.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU158706CU158706transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 30..152
score: 4.2
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 34..145
score: 1.1
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalunknownSSF48019post-AAA+ oligomerization domain-likecoord: 263..430
score: 4.48
IPR021886MgsA AAA+ ATPase C-terminalPFAMPF12002MgsA_Ccoord: 279..430
score: 7.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 1..140
score: 8.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..229
score: 2.66
NoneNo IPR availableGENE3DG3DSA:1.10.3710.10coord: 359..427
score: 3.2
NoneNo IPR availableGENE3DG3DSA:1.10.8.60coord: 141..214
score: 3.
NoneNo IPR availableGENE3DG3DSA:1.20.272.10coord: 260..357
score: 1.4
NoneNo IPR availablePANTHERPTHR13779HOLLIDAY JUNCTION DNA HELICASE RUVB-RELATEDcoord: 232..436
score: 2.6E-217coord: 1..209
score: 2.6E
NoneNo IPR availablePANTHERPTHR13779:SF7ATPASE WRNIP1coord: 1..209
score: 2.6E-217coord: 232..436
score: 2.6E