Csa4G045030 (gene) Cucumber (Chinese Long) v2

NameCsa4G045030
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPentatricopeptide repeat-containing protein; contains IPR002885 (Pentatricopeptide repeat), IPR011990 (Tetratricopeptide-like helical)
LocationChr4 : 3540283 .. 3542524 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACAACTAAAACGCACCGTTTCAGCTATCGAAGTTGCCGGAGTAATTGACGAAGCTCCGCCTCCTCCTCCAGTCCTACAACTGTCTAATGATCGGTTTCTCCCGCAACCTCTCCACTGTCTCCAAGCTTAGTCATTTACAGAACCTCCAAACACGGGGGTCGCCAAATTTCATTCCCTTTCCTCAGTTGCAACACCAGCGGAAGCTTTTAGAATGGCGACTCATGAGTATTCTTCACGACTGCACGCTCTTTTCTCAAATCAAGCAAGTCCATGCCCATATCATCCGCAACGGATTGAGTCAATGTTCTTACGTCCTCACCAAACTCATCCGCATGCTCACGAAGGTAGATGTCCCCATGGGTTCCTACCCACTTTTGGTTTTTGGACAGGTTAATTATCCCAACCCCTTTCTTTGGACTGCCATGATACGTGGATACGCGCTTCAAGGACTCTTGTCTGAATCTACTAACTTCTATACTAGAATGAGGAGGGATGGCGTCGGTCCTGTTTCGTTTACGTTTTCGGCGCTTTTTAAGGCATGTGGGGCTGCTCTTAATATGGATTTGGGTAAGCAGGTGCATGCCCAGACGATTTTGATTGGAGGATTTGCTTCTGATTTGTATGTAGGTAACTCGATGATTGATTTGTATGTGAAATGTGGGTTCTTGGGTTGTGCGCGGAAGGTGTTCGATGAAATGTCTGAAAGAGATGTGGTTTCTTGGACTGAACTGATTGTTGCGTATGCGAAGTATGGGGATATGGAATCTGCTAGTGGTCTGTTTGATGATTTGCCTTTGAAGGATATGGTGGCATGGACGGCAATGGTCACGGGTTATGCCCAAAATGGCAGACCAAAAGAGGCATTGGAGTATTTTCAGAAAATGCAGGATGTAGGTATGGAGACCGACGAAGTTACACTGGCCGGTGTCATTTCAGCCTGTGCTCAGTTGGGCGCAGTTAAACATGCTAACTGGATTAGAGACATTGCTGAAAGATCAGGTTTTGGACCTTCTGGAAACGTAGTAGTGGGATCTGCTCTTATTGATATGTACTCTAAATGTGGCAGTCCTGATGAGGCATATAAGGTTTTTGAAGTAATGAAGGAAAGAAATGTATTTTCTTATAGTTCCATGATTTTGGGATATGCAATGCATGGTCGTGCTCATTCAGCTTTGCAGTTATTCCATGATATGTTAAAAACAGAAATCAGGCCAAATAAGGTTACTTTTATTGGGATACTTTCAGCCTGCAGCCATGCCGGTTTGGTTGAACAAGGCCGACAGCTATTCGCTAAGATGGAGAAGTTTTTCGGTGTTGCTCCGTCACCTGATCATTATGCATGTATGGTAGATCTCCTAGGTCGAGCTGGATGTTTGGAAGAAGCACTCGACCTCGTTAAAACCATGCCAATGGAACCTAATGGAGGTGTATGGGGAGCACTGCTTGGGGCTTGCCGGATCCATGGGAATCCTGACATTGCTCAAATAGCTGCGAACGAACTATTCAAGCTCGAACCAAATGGTATAGGGAACTACATTTTGCTATCGAACATATATGCATCAGCAGGAAGGTGGGAGGAAGTTTCGAAATTGAGGAAAGTAATTAGAGAAAAAGGCTTTAAGAAGAATCCGGGCTGCAGCTGGTTTGAAGGGAAGAATGGGGAAATTCACGATTTCTTTGCAGGTGATACAACTCATCCACGATCAAGTGAGATTAGACAAGCCTTGAAGCAACTAATTGAAAGATTAAGATCCCATGGATACAAACCAAACTTGGGCTCTGCTCCTTATGATTTGACTGATGATGAAAAGGAAAGAATACTGATGAGTCATAGTGAAAAGCTTGCATTGGCATATGGGCTGCTATGTACTGAAGCTGGTGATACCATTAAGATTATGAAAAACATTAGGATATGCGAGGATTGTCACAATGTCATGTGTGCTGCATCAGAGATCACAGGAAGGGAAATCATTGTAAGGGATAATATGAGATTTCATCACTTCCACAATGGGACTTGTTCATGTGGTAACTTTTGGTGAATCATGCGTTGACAGTCTCCTCATTCTCAACTGATTCCTTGCTGGGAGAAAACCATTGTTGAGAATCATTCTGCGTTATGCACTGTTGTGAGTATGAACAGTGAATGATGTAGAAGCCGTGATTCGGTTAGAACCACCAATCGAGTGCCCATAAGTTCATTCTGAAGCTTCAATTCATGGCGGCCTGGATACTTTAACGAGA

mRNA sequence

ATGATCGGTTTCTCCCGCAACCTCTCCACTGTCTCCAAGCTTAGTCATTTACAGAACCTCCAAACACGGGGGTCGCCAAATTTCATTCCCTTTCCTCAGTTGCAACACCAGCGGAAGCTTTTAGAATGGCGACTCATGAGTATTCTTCACGACTGCACGCTCTTTTCTCAAATCAAGCAAGTCCATGCCCATATCATCCGCAACGGATTGAGTCAATGTTCTTACGTCCTCACCAAACTCATCCGCATGCTCACGAAGGTAGATGTCCCCATGGGTTCCTACCCACTTTTGGTTTTTGGACAGGTTAATTATCCCAACCCCTTTCTTTGGACTGCCATGATACGTGGATACGCGCTTCAAGGACTCTTGTCTGAATCTACTAACTTCTATACTAGAATGAGGAGGGATGGCGTCGGTCCTGTTTCGTTTACGTTTTCGGCGCTTTTTAAGGCATGTGGGGCTGCTCTTAATATGGATTTGGGTAAGCAGGTGCATGCCCAGACGATTTTGATTGGAGGATTTGCTTCTGATTTGTATGTAGGTAACTCGATGATTGATTTGTATGTGAAATGTGGGTTCTTGGGTTGTGCGCGGAAGGTGTTCGATGAAATGTCTGAAAGAGATGTGGTTTCTTGGACTGAACTGATTGTTGCGTATGCGAAGTATGGGGATATGGAATCTGCTAGTGGTCTGTTTGATGATTTGCCTTTGAAGGATATGGTGGCATGGACGGCAATGGTCACGGGTTATGCCCAAAATGGCAGACCAAAAGAGGCATTGGAGTATTTTCAGAAAATGCAGGATGTAGGTATGGAGACCGACGAAGTTACACTGGCCGGTGTCATTTCAGCCTGTGCTCAGTTGGGCGCAGTTAAACATGCTAACTGGATTAGAGACATTGCTGAAAGATCAGGTTTTGGACCTTCTGGAAACGTAGTAGTGGGATCTGCTCTTATTGATATGTACTCTAAATGTGGCAGTCCTGATGAGGCATATAAGGTTTTTGAAGTAATGAAGGAAAGAAATGTATTTTCTTATAGTTCCATGATTTTGGGATATGCAATGCATGGTCGTGCTCATTCAGCTTTGCAGTTATTCCATGATATGTTAAAAACAGAAATCAGGCCAAATAAGGTTACTTTTATTGGGATACTTTCAGCCTGCAGCCATGCCGGTTTGGTTGAACAAGGCCGACAGCTATTCGCTAAGATGGAGAAGTTTTTCGGTGTTGCTCCGTCACCTGATCATTATGCATGTATGGTAGATCTCCTAGGTCGAGCTGGATGTTTGGAAGAAGCACTCGACCTCGTTAAAACCATGCCAATGGAACCTAATGGAGGTGTATGGGGAGCACTGCTTGGGGCTTGCCGGATCCATGGGAATCCTGACATTGCTCAAATAGCTGCGAACGAACTATTCAAGCTCGAACCAAATGGTATAGGGAACTACATTTTGCTATCGAACATATATGCATCAGCAGGAAGGTGGGAGGAAGTTTCGAAATTGAGGAAAGTAATTAGAGAAAAAGGCTTTAAGAAGAATCCGGGCTGCAGCTGGTTTGAAGGGAAGAATGGGGAAATTCACGATTTCTTTGCAGGTGATACAACTCATCCACGATCAAGTGAGATTAGACAAGCCTTGAAGCAACTAATTGAAAGATTAAGATCCCATGGATACAAACCAAACTTGGGCTCTGCTCCTTATGATTTGACTGATGATGAAAAGGAAAGAATACTGATGAGTCATAGTGAAAAGCTTGCATTGGCATATGGGCTGCTATGTACTGAAGCTGGTGATACCATTAAGATTATGAAAAACATTAGGATATGCGAGGATTGTCACAATGTCATGTGTGCTGCATCAGAGATCACAGGAAGGGAAATCATTGTAAGGGATAATATGAGATTTCATCACTTCCACAATGGGACTTGTTCATGTGGTAACTTTTGGTGA

Coding sequence (CDS)

ATGATCGGTTTCTCCCGCAACCTCTCCACTGTCTCCAAGCTTAGTCATTTACAGAACCTCCAAACACGGGGGTCGCCAAATTTCATTCCCTTTCCTCAGTTGCAACACCAGCGGAAGCTTTTAGAATGGCGACTCATGAGTATTCTTCACGACTGCACGCTCTTTTCTCAAATCAAGCAAGTCCATGCCCATATCATCCGCAACGGATTGAGTCAATGTTCTTACGTCCTCACCAAACTCATCCGCATGCTCACGAAGGTAGATGTCCCCATGGGTTCCTACCCACTTTTGGTTTTTGGACAGGTTAATTATCCCAACCCCTTTCTTTGGACTGCCATGATACGTGGATACGCGCTTCAAGGACTCTTGTCTGAATCTACTAACTTCTATACTAGAATGAGGAGGGATGGCGTCGGTCCTGTTTCGTTTACGTTTTCGGCGCTTTTTAAGGCATGTGGGGCTGCTCTTAATATGGATTTGGGTAAGCAGGTGCATGCCCAGACGATTTTGATTGGAGGATTTGCTTCTGATTTGTATGTAGGTAACTCGATGATTGATTTGTATGTGAAATGTGGGTTCTTGGGTTGTGCGCGGAAGGTGTTCGATGAAATGTCTGAAAGAGATGTGGTTTCTTGGACTGAACTGATTGTTGCGTATGCGAAGTATGGGGATATGGAATCTGCTAGTGGTCTGTTTGATGATTTGCCTTTGAAGGATATGGTGGCATGGACGGCAATGGTCACGGGTTATGCCCAAAATGGCAGACCAAAAGAGGCATTGGAGTATTTTCAGAAAATGCAGGATGTAGGTATGGAGACCGACGAAGTTACACTGGCCGGTGTCATTTCAGCCTGTGCTCAGTTGGGCGCAGTTAAACATGCTAACTGGATTAGAGACATTGCTGAAAGATCAGGTTTTGGACCTTCTGGAAACGTAGTAGTGGGATCTGCTCTTATTGATATGTACTCTAAATGTGGCAGTCCTGATGAGGCATATAAGGTTTTTGAAGTAATGAAGGAAAGAAATGTATTTTCTTATAGTTCCATGATTTTGGGATATGCAATGCATGGTCGTGCTCATTCAGCTTTGCAGTTATTCCATGATATGTTAAAAACAGAAATCAGGCCAAATAAGGTTACTTTTATTGGGATACTTTCAGCCTGCAGCCATGCCGGTTTGGTTGAACAAGGCCGACAGCTATTCGCTAAGATGGAGAAGTTTTTCGGTGTTGCTCCGTCACCTGATCATTATGCATGTATGGTAGATCTCCTAGGTCGAGCTGGATGTTTGGAAGAAGCACTCGACCTCGTTAAAACCATGCCAATGGAACCTAATGGAGGTGTATGGGGAGCACTGCTTGGGGCTTGCCGGATCCATGGGAATCCTGACATTGCTCAAATAGCTGCGAACGAACTATTCAAGCTCGAACCAAATGGTATAGGGAACTACATTTTGCTATCGAACATATATGCATCAGCAGGAAGGTGGGAGGAAGTTTCGAAATTGAGGAAAGTAATTAGAGAAAAAGGCTTTAAGAAGAATCCGGGCTGCAGCTGGTTTGAAGGGAAGAATGGGGAAATTCACGATTTCTTTGCAGGTGATACAACTCATCCACGATCAAGTGAGATTAGACAAGCCTTGAAGCAACTAATTGAAAGATTAAGATCCCATGGATACAAACCAAACTTGGGCTCTGCTCCTTATGATTTGACTGATGATGAAAAGGAAAGAATACTGATGAGTCATAGTGAAAAGCTTGCATTGGCATATGGGCTGCTATGTACTGAAGCTGGTGATACCATTAAGATTATGAAAAACATTAGGATATGCGAGGATTGTCACAATGTCATGTGTGCTGCATCAGAGATCACAGGAAGGGAAATCATTGTAAGGGATAATATGAGATTTCATCACTTCCACAATGGGACTTGTTCATGTGGTAACTTTTGGTGA

Protein sequence

MIGFSRNLSTVSKLSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW*
BLAST of Csa4G045030 vs. Swiss-Prot
Match: PP417_ARATH (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1)

HSP 1 Score: 780.8 bits (2015), Expect = 1.2e-224
Identity = 387/646 (59.91%), Postives = 486/646 (75.23%), Query Frame = 1

Query: 7   NLSTVSKLSHLQNLQT-RGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHI 66
           N+S +SK    Q LQ  R S N   F ++ +Q++LL   L+S L DC   +QIKQ+H H+
Sbjct: 17  NISLLSK----QLLQLGRTSNNSGTFSEISNQKELLVSSLISKLDDCINLNQIKQIHGHV 76

Query: 67  IRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSE 126
           +R GL Q  Y+LTKLIR LTK+ VPM  Y   V   V + NPFLWTA+IRGYA++G   E
Sbjct: 77  LRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDE 136

Query: 127 STNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMI 186
           +   Y  MR++ + PVSFTFSAL KACG   +++LG+Q HAQT  + GF   +YVGN+MI
Sbjct: 137 AIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF-VYVGNTMI 196

Query: 187 DLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTA 246
           D+YVKC  + CARKVFDEM ERDV+SWTELI AYA+ G+ME A+ LF+ LP KDMVAWTA
Sbjct: 197 DMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTA 256

Query: 247 MVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSG 306
           MVTG+AQN +P+EALEYF +M+  G+  DEVT+AG ISACAQLGA K+A+    IA++SG
Sbjct: 257 MVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSG 316

Query: 307 FGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQL 366
           + PS +VV+GSALIDMYSKCG+ +EA  VF  M  +NVF+YSSMILG A HGRA  AL L
Sbjct: 317 YSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHL 376

Query: 367 FHDML-KTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLL 426
           FH M+ +TEI+PN VTF+G L ACSH+GLV+QGRQ+F  M + FGV P+ DHY CMVDLL
Sbjct: 377 FHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLL 436

Query: 427 GRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYI 486
           GR G L+EAL+L+KTM +EP+GGVWGALLGACRIH NP+IA+IAA  LF+LEP+ IGNYI
Sbjct: 437 GRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYI 496

Query: 487 LLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIR 546
           LLSN+YASAG W  V ++RK+I+EKG KK P  SW   KNG++H FF G+  HP S++I+
Sbjct: 497 LLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQ 556

Query: 547 QALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIM 606
             L++L+ERL   GY+P+L S PYD++D+ K  IL+ H+EKLALA+ LL T    TI IM
Sbjct: 557 DKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIM 616

Query: 607 KNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           KN+R+C DCH  M  ASE+TG+ II+RDNMRFHHF +G CSCG+FW
Sbjct: 617 KNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657

BLAST of Csa4G045030 vs. Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 9.2e-137
Identity = 242/611 (39.61%), Postives = 383/611 (62.68%), Query Frame = 1

Query: 46  MSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLT-----KVDVPMGSYPLLVFG 105
           +++L  C+ FS +K +H  ++R  L    +V ++L+ +            +  Y   +F 
Sbjct: 16  LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75

Query: 106 QVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDL 165
           Q+  PN F++  +IR ++     S++  FYT+M +  + P + TF  L KA      + +
Sbjct: 76  QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135

Query: 166 GKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYA 225
           G+Q H+Q +  G F +D+YV NS++ +Y  CGF+  A ++F +M  RDVVSWT ++  Y 
Sbjct: 136 GEQTHSQIVRFG-FQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 195

Query: 226 KYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAG 285
           K G +E+A  +FD++P +++  W+ M+ GYA+N   ++A++ F+ M+  G+  +E  +  
Sbjct: 196 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 255

Query: 286 VISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKE 345
           VIS+CA LGA++      +   +S    + N+++G+AL+DM+ +CG  ++A  VFE + E
Sbjct: 256 VISSCAHLGALEFGERAYEYVVKSHM--TVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 315

Query: 346 RNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQL 405
            +  S+SS+I G A+HG AH A+  F  M+     P  VTF  +LSACSH GLVE+G ++
Sbjct: 316 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 375

Query: 406 FAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 465
           +  M+K  G+ P  +HY C+VD+LGRAG L EA + +  M ++PN  + GALLGAC+I+ 
Sbjct: 376 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 435

Query: 466 NPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWF 525
           N ++A+   N L K++P   G Y+LLSNIYA AG+W+++  LR +++EK  KK PG S  
Sbjct: 436 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLI 495

Query: 526 EGKNGEIHDFFAG-DTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERIL 585
           E  +G+I+ F  G D  HP   +IR+  ++++ ++R  GYK N G A +D+ ++EKE  +
Sbjct: 496 E-IDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSI 555

Query: 586 MSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHF 645
             HSEKLA+AYG++ T+ G TI+I+KN+R+CEDCH V    SE+ GRE+IVRD  RFHHF
Sbjct: 556 HMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHF 615

Query: 646 HNGTCSCGNFW 651
            NG CSC ++W
Sbjct: 616 RNGVCSCRDYW 622

BLAST of Csa4G045030 vs. Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 2.5e-134
Identity = 242/610 (39.67%), Postives = 366/610 (60.00%), Query Frame = 1

Query: 43  WRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRM-LTKVDVPMGSYPLLVFGQ 102
           +  MS L  C+   ++KQ+HA +++ GL Q SY +TK +   ++        Y  +VF  
Sbjct: 15  YETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDG 74

Query: 103 VNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 162
            + P+ FLW  MIRG++       S   Y RM        ++TF +L KAC      +  
Sbjct: 75  FDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET 134

Query: 163 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAK 222
            Q+HAQ   +G + +D+Y  NS+I+ Y   G    A  +FD + E D VSW  +I  Y K
Sbjct: 135 TQIHAQITKLG-YENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVK 194

Query: 223 YGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGV 282
            G M+ A  LF  +  K+ ++WT M++GY Q    KEAL+ F +MQ+  +E D V+LA  
Sbjct: 195 AGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANA 254

Query: 283 ISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKER 342
           +SACAQLGA++   WI     ++        V+G  LIDMY+KCG  +EA +VF+ +K++
Sbjct: 255 LSACAQLGALEQGKWIHSYLNKTRIRMDS--VLGCVLIDMYAKCGEMEEALEVFKNIKKK 314

Query: 343 NVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLF 402
           +V +++++I GYA HG    A+  F +M K  I+PN +TF  +L+ACS+ GLVE+G+ +F
Sbjct: 315 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 374

Query: 403 AKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGN 462
             ME+ + + P+ +HY C+VDLLGRAG L+EA   ++ MP++PN  +WGALL ACRIH N
Sbjct: 375 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 434

Query: 463 PDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFE 522
            ++ +     L  ++P   G Y+  +NI+A   +W++ ++ R++++E+G  K PGCS   
Sbjct: 435 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI- 494

Query: 523 GKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLT-DDEKERILM 582
              G  H+F AGD +HP   +I+   + +  +L  +GY P L     DL  DDE+E I+ 
Sbjct: 495 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 554

Query: 583 SHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFH 642
            HSEKLA+ YGL+ T+ G  I+IMKN+R+C+DCH V    S+I  R+I++RD  RFHHF 
Sbjct: 555 QHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFR 614

Query: 643 NGTCSCGNFW 651
           +G CSCG++W
Sbjct: 615 DGKCSCGDYW 620

BLAST of Csa4G045030 vs. Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 5.6e-134
Identity = 235/555 (42.34%), Postives = 352/555 (63.42%), Query Frame = 1

Query: 98  VFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALN 157
           VF  +   +   W +MI G+  +G   ++   + +M  + V     T   +  AC    N
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 247

Query: 158 MDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIV 217
           ++ G+QV    I       +L + N+M+D+Y KCG +  A+++FD M E+D V+WT ++ 
Sbjct: 248 LEFGRQV-CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLD 307

Query: 218 AYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQ-DVGMETDEV 277
            YA   D E+A  + + +P KD+VAW A+++ Y QNG+P EAL  F ++Q    M+ +++
Sbjct: 308 GYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQI 367

Query: 278 TLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFE 337
           TL   +SACAQ+GA++   WI    ++ G     N  V SALI MYSKCG  +++ +VF 
Sbjct: 368 TLVSTLSACAQVGALELGRWIHSYIKKHGIRM--NFHVTSALIHMYSKCGDLEKSREVFN 427

Query: 338 VMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQ 397
            +++R+VF +S+MI G AMHG  + A+ +F+ M +  ++PN VTF  +  ACSH GLV++
Sbjct: 428 SVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 487

Query: 398 GRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGAC 457
              LF +ME  +G+ P   HYAC+VD+LGR+G LE+A+  ++ MP+ P+  VWGALLGAC
Sbjct: 488 AESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGAC 547

Query: 458 RIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPG 517
           +IH N ++A++A   L +LEP   G ++LLSNIYA  G+WE VS+LRK +R  G KK PG
Sbjct: 548 KIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPG 607

Query: 518 CSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDE-K 577
           CS  E  +G IH+F +GD  HP S ++   L +++E+L+S+GY+P +      + ++E K
Sbjct: 608 CSSIE-IDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMK 667

Query: 578 ERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMR 637
           E+ L  HSEKLA+ YGL+ TEA   I+++KN+R+C DCH+V    S++  REIIVRD  R
Sbjct: 668 EQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYR 727

Query: 638 FHHFHNGTCSCGNFW 651
           FHHF NG CSC +FW
Sbjct: 728 FHHFRNGQCSCNDFW 738


HSP 2 Score: 162.9 bits (411), Expect = 1.2e-38
Identity = 113/445 (25.39%), Postives = 210/445 (47.19%), Query Frame = 1

Query: 44  RLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVN 103
           R +S++  C    Q+KQ H H+IR G     Y  +KL  M          Y   VF ++ 
Sbjct: 32  RHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIP 91

Query: 104 YPNPFLWTAMIRGYAL-QGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGK 163
            PN F W  +IR YA     +     F   +      P  +TF  L KA     ++ LG+
Sbjct: 92  KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 151

Query: 164 QVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKY 223
            +H   +      SD++V NS+I  Y  CG L  A KVF  + E+DVVSW  +I  + + 
Sbjct: 152 SLHGMAVK-SAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 211

Query: 224 GDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETD---EVTLA 283
           G  + A  LF  +  +D+ A    + G          LE+ +++     E      +TLA
Sbjct: 212 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 271

Query: 284 G-VISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVM 343
             ++    + G+++ A  + D  E        + V  + ++D Y+     + A +V   M
Sbjct: 272 NAMLDMYTKCGSIEDAKRLFDAMEEK------DNVTWTTMLDGYAISEDYEAAREVLNSM 331

Query: 344 KERNVFSYSSMILGYAMHGRAHSALQLFHDM-LKTEIRPNKVTFIGILSACSHAGLVEQG 403
            ++++ +++++I  Y  +G+ + AL +FH++ L+  ++ N++T +  LSAC+  G +E G
Sbjct: 332 PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG 391

Query: 404 RQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACR 463
           R + + ++K  G+  +    + ++ +  + G LE++ ++  ++  + +  VW A++G   
Sbjct: 392 RWIHSYIKK-HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLA 451

Query: 464 IH--GNPDIAQIAANELFKLEPNGI 481
           +H  GN  +      +   ++PNG+
Sbjct: 452 MHGCGNEAVDMFYKMQEANVKPNGV 467

BLAST of Csa4G045030 vs. Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana GN=ELI1 PE=3 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 6.2e-133
Identity = 252/597 (42.21%), Postives = 370/597 (61.98%), Query Frame = 1

Query: 57  QIKQVHAHIIR-NGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIR 116
           ++ Q+HA I+R N L    Y +  L             + L +F Q   P+ FL+TA I 
Sbjct: 44  EVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAIN 103

Query: 117 GYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFA 176
             ++ GL  ++   Y ++    + P  FTFS+L K+C        GK +H   +L  G  
Sbjct: 104 TASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTH-VLKFGLG 163

Query: 177 SDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDL 236
            D YV   ++D+Y K G +  A+KVFD M ER +VS T +I  YAK G++E+A  LFD +
Sbjct: 164 IDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM 223

Query: 237 PLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGM-ETDEVTLAGVISACAQLGAVKHA 296
             +D+V+W  M+ GYAQ+G P +AL  FQK+   G  + DE+T+   +SAC+Q+GA++  
Sbjct: 224 CERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETG 283

Query: 297 NWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYA 356
            WI    + S      NV V + LIDMYSKCGS +EA  VF     +++ ++++MI GYA
Sbjct: 284 RWIHVFVKSSRIRL--NVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYA 343

Query: 357 MHGRAHSALQLFHDMLK-TEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPS 416
           MHG +  AL+LF++M   T ++P  +TFIG L AC+HAGLV +G ++F  M + +G+ P 
Sbjct: 344 MHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPK 403

Query: 417 PDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELF 476
            +HY C+V LLGRAG L+ A + +K M M+ +  +W ++LG+C++HG+  + +  A  L 
Sbjct: 404 IEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLI 463

Query: 477 KLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAG 536
            L     G Y+LLSNIYAS G +E V+K+R +++EKG  K PG S  E +N ++H+F AG
Sbjct: 464 GLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIEN-KVHEFRAG 523

Query: 537 DTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLL 596
           D  H +S EI   L+++ ER++SHGY PN  +   DL + EKE+ L  HSE+LA+AYGL+
Sbjct: 524 DREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLI 583

Query: 597 CTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
            T+ G  +KI KN+R+C DCH V    S+ITGR+I++RD  RFHHF +G+CSCG+FW
Sbjct: 584 STKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632

BLAST of Csa4G045030 vs. TrEMBL
Match: F6GWS8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g02490 PE=4 SV=1)

HSP 1 Score: 971.1 bits (2509), Expect = 6.8e-280
Identity = 466/643 (72.47%), Postives = 554/643 (86.16%), Query Frame = 1

Query: 8   LSTVSKLSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIR 67
           L  + K S+ Q LQT+   +FIPF   Q Q K+LE RL+S+LH CT  +Q+KQVHAHI R
Sbjct: 10  LFILPKTSYCQ-LQTQ---SFIPFSVRQEQ-KILESRLVSVLHGCTHINQVKQVHAHIFR 69

Query: 68  NGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSEST 127
            GL QC +VL KL+R LTK+DVPM  YP LVF QV YPNPFLWTA+IRGYALQG   ES 
Sbjct: 70  KGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESV 129

Query: 128 NFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDL 187
             Y  MRR G+GPVSFTF+AL KAC AAL+++LG+QVH QTILIGGF SDLYVGN++ID+
Sbjct: 130 LLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDM 189

Query: 188 YVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMV 247
           YVKCG LGC  +VFDEM +RDV+SWT LIVAYAK G+ME+AS LFD LP+KDMVAWTAMV
Sbjct: 190 YVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMV 249

Query: 248 TGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFG 307
           TGYAQN RP+EALE F++MQ  G++TDEVTL GVISACAQLGA K+ANW+RD+AE+SGFG
Sbjct: 250 TGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFG 309

Query: 308 PSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFH 367
           P+ NVVVGSALIDMY+KCGS ++AYKVFE M+ERNV+SYSSMI+G+AMHG A +A++LF 
Sbjct: 310 PTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFD 369

Query: 368 DMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRA 427
           +MLKTEI+PN+VTFIG+L+ACSHAG+VEQG+QLFA ME+  GVAPS DHYACMVDLLGRA
Sbjct: 370 EMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRA 429

Query: 428 GCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLS 487
           G LEEAL+LVK MPM P+GGVWGALLGACRIHGNPD+AQIAA+ LF+LEPNGIGNYILLS
Sbjct: 430 GRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELEPNGIGNYILLS 489

Query: 488 NIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQAL 547
           NIYASAGRW++VSK+RK++R KG KKNPGCSW EGK G IH+FFAGD +HP+S EI+QAL
Sbjct: 490 NIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQAL 549

Query: 548 KQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNI 607
           + L++RL+  GY+PNL S  YD++D+EK+R+LMSHSEKLALA+GLL T AG TI+I+KN+
Sbjct: 550 EDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNL 609

Query: 608 RICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           RICEDCH+VMC AS+ITGREI+VRDNMRFHHF +G CSCGNFW
Sbjct: 610 RICEDCHSVMCGASQITGREIVVRDNMRFHHFRDGRCSCGNFW 647

BLAST of Csa4G045030 vs. TrEMBL
Match: M5VV81_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002597mg PE=4 SV=1)

HSP 1 Score: 958.4 bits (2476), Expect = 4.6e-276
Identity = 461/654 (70.49%), Postives = 550/654 (84.10%), Query Frame = 1

Query: 1   MIGFSRNLSTVS--KLSHLQNLQTRGSPN--FIPFPQLQHQRKLLEWRLMSILHDCTLFS 60
           M   SR  STV   KL   Q  Q +  P   FIPF + Q +RKLLE +L+S L  C   S
Sbjct: 1   MQNLSRRFSTVPIHKLLPQQLHQHQPQPTRFFIPFSEFQQKRKLLEHKLISDLDGCDNLS 60

Query: 61  QIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRG 120
           Q+K+VHAH++R+GLSQC YVLTKL+R LTK+ VP+ +YP LVF QV YPNPFLWTAMIRG
Sbjct: 61  QVKEVHAHLLRHGLSQCCYVLTKLVRTLTKLGVPVDAYPRLVFVQVKYPNPFLWTAMIRG 120

Query: 121 YALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFAS 180
           Y +QG +SE+ NFYT MR  G GPVSFTFSALFKACG  L+++LG+Q+HAQTIL+GGFA+
Sbjct: 121 YTVQGPISEALNFYTCMRSAGTGPVSFTFSALFKACGDVLDVNLGRQIHAQTILVGGFAA 180

Query: 181 DLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLP 240
           DLYVGN+MID+YVKCGFL C RKVFDEM +RDVVSWTELIVAY K GDM SA  LF+ LP
Sbjct: 181 DLYVGNTMIDMYVKCGFLDCGRKVFDEMPDRDVVSWTELIVAYTKIGDMGSARELFEGLP 240

Query: 241 LKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANW 300
           +KDMVAWTAMVTGYAQN RP++AL+ F++MQ  G+ TDE+TL G+ISACAQLGA K+ANW
Sbjct: 241 VKDMVAWTAMVTGYAQNARPRDALDCFERMQGAGVGTDEITLVGLISACAQLGASKYANW 300

Query: 301 IRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMH 360
           +RDIAE+SGFGP+ NV+VGSALIDMYSKCGS DEAYKVF+ MKERNVFSYSSMILG+AMH
Sbjct: 301 VRDIAEKSGFGPTENVLVGSALIDMYSKCGSLDEAYKVFQGMKERNVFSYSSMILGFAMH 360

Query: 361 GRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDH 420
           GRA++A++LFH+ML TEIRPN+VTFIG+L+ACSHAG+V+QGRQLFA MEK++ V PS DH
Sbjct: 361 GRANAAIELFHEMLTTEIRPNRVTFIGVLTACSHAGMVDQGRQLFATMEKYYNVVPSADH 420

Query: 421 YACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLE 480
           Y CMVDLLGRAG LEEAL+LV+TMP+  +GGVWGALLGAC IHGNPDIAQIAAN LF+LE
Sbjct: 421 YTCMVDLLGRAGRLEEALELVETMPIAAHGGVWGALLGACHIHGNPDIAQIAANHLFELE 480

Query: 481 PNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTT 540
           P+ IGN+++LSNIYASAGRW +VS++RK+++EKG KKNP  SW E K G IH+F AG+T 
Sbjct: 481 PDSIGNHVMLSNIYASAGRWADVSRVRKMMKEKGLKKNPAYSWVETKKGVIHEFCAGETN 540

Query: 541 HPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTE 600
           HP  +EI++AL  L+ RL++HGY+PNL SA YDL  +E++RILMSHSEKLALAY L+ T+
Sbjct: 541 HPEYAEIKKALDDLLNRLQAHGYQPNLNSAAYDLGIEERKRILMSHSEKLALAYALVSTD 600

Query: 601 AGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           +G TIKIMKNIRICEDCH  MC AS++ GREI+VRDNMRFHHF NG CSCGNFW
Sbjct: 601 SGSTIKIMKNIRICEDCHVFMCGASQVAGREIVVRDNMRFHHFSNGKCSCGNFW 654

BLAST of Csa4G045030 vs. TrEMBL
Match: A0A061DFG9_THECC (Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_000299 PE=4 SV=1)

HSP 1 Score: 938.3 bits (2424), Expect = 4.9e-270
Identity = 446/658 (67.78%), Postives = 542/658 (82.37%), Query Frame = 1

Query: 1   MIGFSRNLSTVSKLS--------HLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDC 60
           M+  SR  ST S           HLQ +Q++ +  FIPF QLQ+QR LLE +L+S L+ C
Sbjct: 1   MVALSRKFSTSSLKFIPKQFCQYHLQQIQSQTTQPFIPFSQLQNQRNLLESQLISTLNGC 60

Query: 61  TLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTA 120
           T  +Q KQ HA+IIR GL QC Y+L KL+R LTK+ +PM +Y  LVF QV YPNPFLWTA
Sbjct: 61  TSLTQFKQTHAYIIRKGLDQCCYILAKLVRNLTKMGIPMDNYAKLVFDQVEYPNPFLWTA 120

Query: 121 MIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIG 180
           +IRGYALQG + ES + Y+ MR +G  PVSFTFSALFKAC   L+++LG+Q+HAQTILIG
Sbjct: 121 LIRGYALQGHVKESVSVYSCMREEGSLPVSFTFSALFKACCTVLDVNLGRQIHAQTILIG 180

Query: 181 GFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLF 240
           GF SDLYV NS+I++YVK GFLGCARKVFDE+ ERD++SWTELIVAYAK GDMESA  LF
Sbjct: 181 GFGSDLYVNNSLIEMYVKLGFLGCARKVFDELPERDLISWTELIVAYAKLGDMESAGELF 240

Query: 241 DDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVK 300
           D+LP+KDMVAWT MVTGYAQN +P+EALE+F++MQ+ G+ETDEVTL GVISACAQLG  K
Sbjct: 241 DELPIKDMVAWTTMVTGYAQNAKPREALEFFERMQNEGVETDEVTLVGVISACAQLGTAK 300

Query: 301 HANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILG 360
           +ANW+R IAE SGF P+  VVVGSALIDMYSKCGS ++AYKVFE M+ERNVFSYSSMI G
Sbjct: 301 YANWVRGIAENSGFDPTRCVVVGSALIDMYSKCGSVEDAYKVFEAMEERNVFSYSSMIAG 360

Query: 361 YAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAP 420
           +AMHG A++AL+LF +M+KT I+PN+VTFIG+L+ACSH+G+VEQGRQ+FA ME+ FGV+P
Sbjct: 361 FAMHGCAYAALELFREMVKTGIKPNRVTFIGVLTACSHSGMVEQGRQIFASMEEEFGVSP 420

Query: 421 SPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANEL 480
           + DHYAC+VDLLGRAGCLEEAL+L +TMP+EPNGGVWGALLGACR +GNPD+AQI AN L
Sbjct: 421 AVDHYACIVDLLGRAGCLEEALNLAETMPVEPNGGVWGALLGACRTYGNPDMAQIGANHL 480

Query: 481 FKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFA 540
           F+LEPN IGNYILLSNIYASAGRW +VS +RK++REKG +KNP CSW E K G IH+FFA
Sbjct: 481 FELEPNAIGNYILLSNIYASAGRWNDVSMVRKLMREKGLRKNPACSWLEAKKGVIHEFFA 540

Query: 541 GDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGL 600
           GD T+PRS +++Q L+ L+ RL+  GY+PN+ S  YD+ D++K R+LM+HSEKLALA+GL
Sbjct: 541 GDITNPRSGQMKQVLEDLLNRLKGLGYQPNMSSVAYDVNDEDKRRLLMAHSEKLALAFGL 600

Query: 601 LCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           L   A   I+IMKN+RICEDCH+ MC  S+IT R IIVRDN+RFHHFH G CSCGNFW
Sbjct: 601 LTISADCPIRIMKNLRICEDCHSFMCGVSQITERVIIVRDNLRFHHFHAGKCSCGNFW 658

BLAST of Csa4G045030 vs. TrEMBL
Match: V4SE67_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025108mg PE=4 SV=1)

HSP 1 Score: 936.4 bits (2419), Expect = 1.9e-269
Identity = 449/653 (68.76%), Postives = 539/653 (82.54%), Query Frame = 1

Query: 1   MIGFSRNLSTVSKLSHLQNL---QTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQ 60
           M+  +R  ST S L ++      Q + S  F    +LQ Q++LLE +L+S L  C    Q
Sbjct: 1   MVSLTRTFSTASSLGYIPKQFTQQLKPSETFELLSELQRQKRLLETQLISTLDGCNDLLQ 60

Query: 61  IKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGY 120
           IKQVHAHI+R GL Q  YVLTK+IR LTK++VPM SYP LVF QV Y NPFLWTA+IRGY
Sbjct: 61  IKQVHAHILRRGLDQSCYVLTKVIRTLTKINVPMDSYPRLVFEQVKYRNPFLWTALIRGY 120

Query: 121 ALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASD 180
            LQG L +S + Y  MRR+G+GPVSFT SALFKAC   L++ LG+Q+HAQTIL+GGF SD
Sbjct: 121 ILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSD 180

Query: 181 LYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPL 240
           LYV N+MI +YVKCGFLGC+RKVFDEM ERDVVSWTELIVAYA  GDMESA GLF++LPL
Sbjct: 181 LYVANTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPL 240

Query: 241 KDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWI 300
           KD VAWTAMVTGY QN +P+EA+EYF++MQ  G+ETD VTL GVISACAQLG VK+ANW+
Sbjct: 241 KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVVKYANWV 300

Query: 301 RDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHG 360
            +IAE SGFGP  NVVVGSALIDMYSKCGS D+AY+VF  MK+RNVFSYSSMILG+AMHG
Sbjct: 301 CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRVFVDMKQRNVFSYSSMILGFAMHG 360

Query: 361 RAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHY 420
           RAH+A+QLF +M+KTE +PN VTFIG+L+ACSH GLVEQGR+LFA MEK +GV+PS DHY
Sbjct: 361 RAHAAIQLFGEMVKTETKPNGVTFIGVLTACSHVGLVEQGRKLFASMEKCYGVSPSTDHY 420

Query: 421 ACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEP 480
           ACMVDLLGRAGCLEEAL +V+ MP+EPNGGVWGALLGAC+IH NP+IAQIAAN LF+LEP
Sbjct: 421 ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFQLEP 480

Query: 481 NGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTH 540
           + IGNYI+LSNIYASAG W++VS++R++++  G KKNPG SW EG  G IH+F AGD TH
Sbjct: 481 DKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTH 540

Query: 541 PRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEA 600
           P S+EI+QAL  L++RL++ GY+PNL S  YD++D+EK+RILM+HSEKLALA+GLL T  
Sbjct: 541 PNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSP 600

Query: 601 GDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           G T++IMKN+RICEDCH  MC AS++ GREI+VRDNMRFHHF +G CSCGN+W
Sbjct: 601 GATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 653

BLAST of Csa4G045030 vs. TrEMBL
Match: A0A0D2NUT2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G012700 PE=4 SV=1)

HSP 1 Score: 904.8 bits (2337), Expect = 6.0e-260
Identity = 426/633 (67.30%), Postives = 524/633 (82.78%), Query Frame = 1

Query: 18  QNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVL 77
           Q +Q++ +P FIPF Q Q+QR LLE +L+S L+ CT  +QI+Q+HA I+R G  QC YVL
Sbjct: 26  QQIQSQTTPPFIPFSQRQNQRSLLESQLISALNCCTSLTQIQQIHARILRKGFEQCCYVL 85

Query: 78  TKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDG 137
           TKLIR+LTK+++PM SY  LVF QV  PNPFL TA+IRGY LQGL+ ES   Y+ MR+  
Sbjct: 86  TKLIRILTKMEIPMDSYAKLVFNQVENPNPFLCTALIRGYCLQGLVKESVFVYSEMRKKS 145

Query: 138 VGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCA 197
           V P+SFTFSALFKACG   ++DLG+Q+H QTILIGGF  DL+V NS+I++YVK GFLGC 
Sbjct: 146 VLPISFTFSALFKACGVVNDVDLGRQIHGQTILIGGFGFDLFVKNSLIEMYVKLGFLGCG 205

Query: 198 RKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPK 257
           RKVFDE+ ERD++SWTELIV Y K GDMESA  LF +LP KDMVAWTAMVTGYAQN +P+
Sbjct: 206 RKVFDELPERDLISWTELIVGYVKAGDMESAGELFSELPKKDMVAWTAMVTGYAQNAKPR 265

Query: 258 EALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSA 317
           EALE+F++M + G+ETDEVTL GVISACAQLGA K+ANWIRDI E  GF P+  VVVGSA
Sbjct: 266 EALEFFERMLNEGVETDEVTLVGVISACAQLGAAKYANWIRDIVENLGFSPTRCVVVGSA 325

Query: 318 LIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPN 377
           LIDMYSKCGS ++AYK F+VM+E+NVFSYSSMI G+AMHG A++AL+LFH+M+K  I+PN
Sbjct: 326 LIDMYSKCGSVEDAYKAFKVMEEKNVFSYSSMIAGFAMHGYAYAALELFHEMVKIGIKPN 385

Query: 378 KVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLV 437
           KVTFIG+L+ACSH+ +VEQGRQ+F  ME+ FG++P  DHY+CMVDLLGRAGCLEEAL+L 
Sbjct: 386 KVTFIGVLTACSHSRMVEQGRQIFESMEEKFGISPGVDHYSCMVDLLGRAGCLEEALNLA 445

Query: 438 KTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWE 497
           +TMP+EPNGGVWGALLGACR + NPDIAQIAAN LF+LEPN IGNYILLSNIYASAG+W 
Sbjct: 446 ETMPLEPNGGVWGALLGACRTYSNPDIAQIAANHLFELEPNAIGNYILLSNIYASAGQWN 505

Query: 498 EVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSH 557
           +V  +RK++REKG +KNPGCSW E K G I +FFAGD +HPR  E++Q L+ L+ RL++ 
Sbjct: 506 DVLMVRKMMREKGLRKNPGCSWLETKKGVIQEFFAGDMSHPRYGEMKQVLEDLLNRLKAI 565

Query: 558 GYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVM 617
           GY+PN+ S  YD++D+EK RIL++HSEKLALA+GLL   A   ++IMKNIR+CEDCH+ +
Sbjct: 566 GYQPNMNSIAYDVSDEEKRRILITHSEKLALAFGLLDINADFPVRIMKNIRMCEDCHSFI 625

Query: 618 CAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           C  S+IT R IIVRDN+RFHHFH+G CSCGNFW
Sbjct: 626 CGVSQITRRVIIVRDNLRFHHFHDGKCSCGNFW 658

BLAST of Csa4G045030 vs. TAIR10
Match: AT5G44230.1 (AT5G44230.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 780.8 bits (2015), Expect = 6.6e-226
Identity = 387/646 (59.91%), Postives = 486/646 (75.23%), Query Frame = 1

Query: 7   NLSTVSKLSHLQNLQT-RGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHI 66
           N+S +SK    Q LQ  R S N   F ++ +Q++LL   L+S L DC   +QIKQ+H H+
Sbjct: 17  NISLLSK----QLLQLGRTSNNSGTFSEISNQKELLVSSLISKLDDCINLNQIKQIHGHV 76

Query: 67  IRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSE 126
           +R GL Q  Y+LTKLIR LTK+ VPM  Y   V   V + NPFLWTA+IRGYA++G   E
Sbjct: 77  LRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDE 136

Query: 127 STNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMI 186
           +   Y  MR++ + PVSFTFSAL KACG   +++LG+Q HAQT  + GF   +YVGN+MI
Sbjct: 137 AIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF-VYVGNTMI 196

Query: 187 DLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTA 246
           D+YVKC  + CARKVFDEM ERDV+SWTELI AYA+ G+ME A+ LF+ LP KDMVAWTA
Sbjct: 197 DMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTA 256

Query: 247 MVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSG 306
           MVTG+AQN +P+EALEYF +M+  G+  DEVT+AG ISACAQLGA K+A+    IA++SG
Sbjct: 257 MVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSG 316

Query: 307 FGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQL 366
           + PS +VV+GSALIDMYSKCG+ +EA  VF  M  +NVF+YSSMILG A HGRA  AL L
Sbjct: 317 YSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHL 376

Query: 367 FHDML-KTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLL 426
           FH M+ +TEI+PN VTF+G L ACSH+GLV+QGRQ+F  M + FGV P+ DHY CMVDLL
Sbjct: 377 FHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLL 436

Query: 427 GRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYI 486
           GR G L+EAL+L+KTM +EP+GGVWGALLGACRIH NP+IA+IAA  LF+LEP+ IGNYI
Sbjct: 437 GRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYI 496

Query: 487 LLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIR 546
           LLSN+YASAG W  V ++RK+I+EKG KK P  SW   KNG++H FF G+  HP S++I+
Sbjct: 497 LLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQ 556

Query: 547 QALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIM 606
             L++L+ERL   GY+P+L S PYD++D+ K  IL+ H+EKLALA+ LL T    TI IM
Sbjct: 557 DKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIM 616

Query: 607 KNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           KN+R+C DCH  M  ASE+TG+ II+RDNMRFHHF +G CSCG+FW
Sbjct: 617 KNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657

BLAST of Csa4G045030 vs. TAIR10
Match: AT5G06540.1 (AT5G06540.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 488.8 bits (1257), Expect = 5.2e-138
Identity = 242/611 (39.61%), Postives = 383/611 (62.68%), Query Frame = 1

Query: 46  MSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLT-----KVDVPMGSYPLLVFG 105
           +++L  C+ FS +K +H  ++R  L    +V ++L+ +            +  Y   +F 
Sbjct: 16  LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75

Query: 106 QVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDL 165
           Q+  PN F++  +IR ++     S++  FYT+M +  + P + TF  L KA      + +
Sbjct: 76  QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135

Query: 166 GKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYA 225
           G+Q H+Q +  G F +D+YV NS++ +Y  CGF+  A ++F +M  RDVVSWT ++  Y 
Sbjct: 136 GEQTHSQIVRFG-FQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 195

Query: 226 KYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAG 285
           K G +E+A  +FD++P +++  W+ M+ GYA+N   ++A++ F+ M+  G+  +E  +  
Sbjct: 196 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 255

Query: 286 VISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKE 345
           VIS+CA LGA++      +   +S    + N+++G+AL+DM+ +CG  ++A  VFE + E
Sbjct: 256 VISSCAHLGALEFGERAYEYVVKSHM--TVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 315

Query: 346 RNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQL 405
            +  S+SS+I G A+HG AH A+  F  M+     P  VTF  +LSACSH GLVE+G ++
Sbjct: 316 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 375

Query: 406 FAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 465
           +  M+K  G+ P  +HY C+VD+LGRAG L EA + +  M ++PN  + GALLGAC+I+ 
Sbjct: 376 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 435

Query: 466 NPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWF 525
           N ++A+   N L K++P   G Y+LLSNIYA AG+W+++  LR +++EK  KK PG S  
Sbjct: 436 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLI 495

Query: 526 EGKNGEIHDFFAG-DTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERIL 585
           E  +G+I+ F  G D  HP   +IR+  ++++ ++R  GYK N G A +D+ ++EKE  +
Sbjct: 496 E-IDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSI 555

Query: 586 MSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHF 645
             HSEKLA+AYG++ T+ G TI+I+KN+R+CEDCH V    SE+ GRE+IVRD  RFHHF
Sbjct: 556 HMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHF 615

Query: 646 HNGTCSCGNFW 651
            NG CSC ++W
Sbjct: 616 RNGVCSCRDYW 622

BLAST of Csa4G045030 vs. TAIR10
Match: AT5G66520.1 (AT5G66520.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 480.7 bits (1236), Expect = 1.4e-135
Identity = 242/610 (39.67%), Postives = 366/610 (60.00%), Query Frame = 1

Query: 43  WRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRM-LTKVDVPMGSYPLLVFGQ 102
           +  MS L  C+   ++KQ+HA +++ GL Q SY +TK +   ++        Y  +VF  
Sbjct: 15  YETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDG 74

Query: 103 VNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 162
            + P+ FLW  MIRG++       S   Y RM        ++TF +L KAC      +  
Sbjct: 75  FDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET 134

Query: 163 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAK 222
            Q+HAQ   +G + +D+Y  NS+I+ Y   G    A  +FD + E D VSW  +I  Y K
Sbjct: 135 TQIHAQITKLG-YENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVK 194

Query: 223 YGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGV 282
            G M+ A  LF  +  K+ ++WT M++GY Q    KEAL+ F +MQ+  +E D V+LA  
Sbjct: 195 AGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANA 254

Query: 283 ISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKER 342
           +SACAQLGA++   WI     ++        V+G  LIDMY+KCG  +EA +VF+ +K++
Sbjct: 255 LSACAQLGALEQGKWIHSYLNKTRIRMDS--VLGCVLIDMYAKCGEMEEALEVFKNIKKK 314

Query: 343 NVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLF 402
           +V +++++I GYA HG    A+  F +M K  I+PN +TF  +L+ACS+ GLVE+G+ +F
Sbjct: 315 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 374

Query: 403 AKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGN 462
             ME+ + + P+ +HY C+VDLLGRAG L+EA   ++ MP++PN  +WGALL ACRIH N
Sbjct: 375 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 434

Query: 463 PDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFE 522
            ++ +     L  ++P   G Y+  +NI+A   +W++ ++ R++++E+G  K PGCS   
Sbjct: 435 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI- 494

Query: 523 GKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLT-DDEKERILM 582
              G  H+F AGD +HP   +I+   + +  +L  +GY P L     DL  DDE+E I+ 
Sbjct: 495 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 554

Query: 583 SHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFH 642
            HSEKLA+ YGL+ T+ G  I+IMKN+R+C+DCH V    S+I  R+I++RD  RFHHF 
Sbjct: 555 QHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFR 614

Query: 643 NGTCSCGNFW 651
           +G CSCG++W
Sbjct: 615 DGKCSCGDYW 620

BLAST of Csa4G045030 vs. TAIR10
Match: AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 479.6 bits (1233), Expect = 3.1e-135
Identity = 235/555 (42.34%), Postives = 352/555 (63.42%), Query Frame = 1

Query: 98  VFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALN 157
           VF  +   +   W +MI G+  +G   ++   + +M  + V     T   +  AC    N
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 247

Query: 158 MDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIV 217
           ++ G+QV    I       +L + N+M+D+Y KCG +  A+++FD M E+D V+WT ++ 
Sbjct: 248 LEFGRQV-CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLD 307

Query: 218 AYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQ-DVGMETDEV 277
            YA   D E+A  + + +P KD+VAW A+++ Y QNG+P EAL  F ++Q    M+ +++
Sbjct: 308 GYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQI 367

Query: 278 TLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFE 337
           TL   +SACAQ+GA++   WI    ++ G     N  V SALI MYSKCG  +++ +VF 
Sbjct: 368 TLVSTLSACAQVGALELGRWIHSYIKKHGIRM--NFHVTSALIHMYSKCGDLEKSREVFN 427

Query: 338 VMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQ 397
            +++R+VF +S+MI G AMHG  + A+ +F+ M +  ++PN VTF  +  ACSH GLV++
Sbjct: 428 SVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 487

Query: 398 GRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGAC 457
              LF +ME  +G+ P   HYAC+VD+LGR+G LE+A+  ++ MP+ P+  VWGALLGAC
Sbjct: 488 AESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGAC 547

Query: 458 RIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPG 517
           +IH N ++A++A   L +LEP   G ++LLSNIYA  G+WE VS+LRK +R  G KK PG
Sbjct: 548 KIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPG 607

Query: 518 CSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDE-K 577
           CS  E  +G IH+F +GD  HP S ++   L +++E+L+S+GY+P +      + ++E K
Sbjct: 608 CSSIE-IDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMK 667

Query: 578 ERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMR 637
           E+ L  HSEKLA+ YGL+ TEA   I+++KN+R+C DCH+V    S++  REIIVRD  R
Sbjct: 668 EQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYR 727

Query: 638 FHHFHNGTCSCGNFW 651
           FHHF NG CSC +FW
Sbjct: 728 FHHFRNGQCSCNDFW 738


HSP 2 Score: 162.9 bits (411), Expect = 6.5e-40
Identity = 113/445 (25.39%), Postives = 210/445 (47.19%), Query Frame = 1

Query: 44  RLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVN 103
           R +S++  C    Q+KQ H H+IR G     Y  +KL  M          Y   VF ++ 
Sbjct: 32  RHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIP 91

Query: 104 YPNPFLWTAMIRGYAL-QGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGK 163
            PN F W  +IR YA     +     F   +      P  +TF  L KA     ++ LG+
Sbjct: 92  KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 151

Query: 164 QVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKY 223
            +H   +      SD++V NS+I  Y  CG L  A KVF  + E+DVVSW  +I  + + 
Sbjct: 152 SLHGMAVK-SAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 211

Query: 224 GDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETD---EVTLA 283
           G  + A  LF  +  +D+ A    + G          LE+ +++     E      +TLA
Sbjct: 212 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 271

Query: 284 G-VISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVM 343
             ++    + G+++ A  + D  E        + V  + ++D Y+     + A +V   M
Sbjct: 272 NAMLDMYTKCGSIEDAKRLFDAMEEK------DNVTWTTMLDGYAISEDYEAAREVLNSM 331

Query: 344 KERNVFSYSSMILGYAMHGRAHSALQLFHDM-LKTEIRPNKVTFIGILSACSHAGLVEQG 403
            ++++ +++++I  Y  +G+ + AL +FH++ L+  ++ N++T +  LSAC+  G +E G
Sbjct: 332 PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG 391

Query: 404 RQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACR 463
           R + + ++K  G+  +    + ++ +  + G LE++ ++  ++  + +  VW A++G   
Sbjct: 392 RWIHSYIKK-HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLA 451

Query: 464 IH--GNPDIAQIAANELFKLEPNGI 481
           +H  GN  +      +   ++PNG+
Sbjct: 452 MHGCGNEAVDMFYKMQEANVKPNGV 467

BLAST of Csa4G045030 vs. TAIR10
Match: AT4G37380.1 (AT4G37380.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 476.1 bits (1224), Expect = 3.5e-134
Identity = 252/597 (42.21%), Postives = 370/597 (61.98%), Query Frame = 1

Query: 57  QIKQVHAHIIR-NGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIR 116
           ++ Q+HA I+R N L    Y +  L             + L +F Q   P+ FL+TA I 
Sbjct: 44  EVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAIN 103

Query: 117 GYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFA 176
             ++ GL  ++   Y ++    + P  FTFS+L K+C        GK +H   +L  G  
Sbjct: 104 TASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTH-VLKFGLG 163

Query: 177 SDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDL 236
            D YV   ++D+Y K G +  A+KVFD M ER +VS T +I  YAK G++E+A  LFD +
Sbjct: 164 IDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM 223

Query: 237 PLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGM-ETDEVTLAGVISACAQLGAVKHA 296
             +D+V+W  M+ GYAQ+G P +AL  FQK+   G  + DE+T+   +SAC+Q+GA++  
Sbjct: 224 CERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETG 283

Query: 297 NWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYA 356
            WI    + S      NV V + LIDMYSKCGS +EA  VF     +++ ++++MI GYA
Sbjct: 284 RWIHVFVKSSRIRL--NVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYA 343

Query: 357 MHGRAHSALQLFHDMLK-TEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPS 416
           MHG +  AL+LF++M   T ++P  +TFIG L AC+HAGLV +G ++F  M + +G+ P 
Sbjct: 344 MHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPK 403

Query: 417 PDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELF 476
            +HY C+V LLGRAG L+ A + +K M M+ +  +W ++LG+C++HG+  + +  A  L 
Sbjct: 404 IEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLI 463

Query: 477 KLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAG 536
            L     G Y+LLSNIYAS G +E V+K+R +++EKG  K PG S  E +N ++H+F AG
Sbjct: 464 GLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIEN-KVHEFRAG 523

Query: 537 DTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLL 596
           D  H +S EI   L+++ ER++SHGY PN  +   DL + EKE+ L  HSE+LA+AYGL+
Sbjct: 524 DREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLI 583

Query: 597 CTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
            T+ G  +KI KN+R+C DCH V    S+ITGR+I++RD  RFHHF +G+CSCG+FW
Sbjct: 584 STKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632

BLAST of Csa4G045030 vs. NCBI nr
Match: gi|449457516|ref|XP_004146494.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g44230 [Cucumis sativus])

HSP 1 Score: 1328.5 bits (3437), Expect = 0.0e+00
Identity = 650/650 (100.00%), Postives = 650/650 (100.00%), Query Frame = 1

Query: 1   MIGFSRNLSTVSKLSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 60
           MIGFSRNLSTVSKLSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ
Sbjct: 1   MIGFSRNLSTVSKLSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 60

Query: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120
           VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120

Query: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180
           GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV
Sbjct: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180

Query: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240
           GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM
Sbjct: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240

Query: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300
           VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI
Sbjct: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300

Query: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360
           AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH
Sbjct: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360

Query: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420
           SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM
Sbjct: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420

Query: 421 VDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480
           VDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI
Sbjct: 421 VDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540
           GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS
Sbjct: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540

Query: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600
           SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT
Sbjct: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600

Query: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW
Sbjct: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650

BLAST of Csa4G045030 vs. NCBI nr
Match: gi|659102402|ref|XP_008452110.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g44230 [Cucumis melo])

HSP 1 Score: 1288.5 bits (3333), Expect = 0.0e+00
Identity = 627/650 (96.46%), Postives = 637/650 (98.00%), Query Frame = 1

Query: 1   MIGFSRNLSTVSKLSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 60
           MIGFSRNLSTVSKLSHLQNLQT  SPN IPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ
Sbjct: 14  MIGFSRNLSTVSKLSHLQNLQTPASPNIIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 73

Query: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120
           VH HIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 74  VHGHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 133

Query: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180
           GL+SESTNFYTRMRRDGVGPVSFTFSALFKACGA+LNMDLGKQVHAQTILIGGFASDLYV
Sbjct: 134 GLVSESTNFYTRMRRDGVGPVSFTFSALFKACGASLNMDLGKQVHAQTILIGGFASDLYV 193

Query: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240
           GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM
Sbjct: 194 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 253

Query: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300
           VAWTAMVTGYAQN RPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI
Sbjct: 254 VAWTAMVTGYAQNARPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 313

Query: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360
           AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRA 
Sbjct: 314 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAR 373

Query: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420
           SALQLFH+MLKTEIRPNKVTF+G+LSACSHAGLVEQGRQ+FAKMEKFFGVAPSPDHYACM
Sbjct: 374 SALQLFHEMLKTEIRPNKVTFLGVLSACSHAGLVEQGRQVFAKMEKFFGVAPSPDHYACM 433

Query: 421 VDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480
           VDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAAN+LF LEPN I
Sbjct: 434 VDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANQLFNLEPNSI 493

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540
           GNYILLSNIYASAGRWEEVSKLRKVIREKG KKNPGCSWFEGKNGEIHDFFAGDTTH RS
Sbjct: 494 GNYILLSNIYASAGRWEEVSKLRKVIREKGLKKNPGCSWFEGKNGEIHDFFAGDTTHSRS 553

Query: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600
           SEIRQALKQLIERLR+HGYKPNL SAPYD+TDDEKERILMSHSEKLALAYGLLCT AGDT
Sbjct: 554 SEIRQALKQLIERLRAHGYKPNLSSAPYDMTDDEKERILMSHSEKLALAYGLLCTSAGDT 613

Query: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           IKIMKNIRICEDCHNVMCAASEITGREII+RDNMRFHHFH GTCSCGNFW
Sbjct: 614 IKIMKNIRICEDCHNVMCAASEITGREIIIRDNMRFHHFHKGTCSCGNFW 663

BLAST of Csa4G045030 vs. NCBI nr
Match: gi|225431281|ref|XP_002268784.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g44230 [Vitis vinifera])

HSP 1 Score: 971.1 bits (2509), Expect = 9.8e-280
Identity = 466/643 (72.47%), Postives = 554/643 (86.16%), Query Frame = 1

Query: 8   LSTVSKLSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIR 67
           L  + K S+ Q LQT+   +FIPF   Q Q K+LE RL+S+LH CT  +Q+KQVHAHI R
Sbjct: 10  LFILPKTSYCQ-LQTQ---SFIPFSVRQEQ-KILESRLVSVLHGCTHINQVKQVHAHIFR 69

Query: 68  NGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSEST 127
            GL QC +VL KL+R LTK+DVPM  YP LVF QV YPNPFLWTA+IRGYALQG   ES 
Sbjct: 70  KGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESV 129

Query: 128 NFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDL 187
             Y  MRR G+GPVSFTF+AL KAC AAL+++LG+QVH QTILIGGF SDLYVGN++ID+
Sbjct: 130 LLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDM 189

Query: 188 YVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMV 247
           YVKCG LGC  +VFDEM +RDV+SWT LIVAYAK G+ME+AS LFD LP+KDMVAWTAMV
Sbjct: 190 YVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMV 249

Query: 248 TGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFG 307
           TGYAQN RP+EALE F++MQ  G++TDEVTL GVISACAQLGA K+ANW+RD+AE+SGFG
Sbjct: 250 TGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFG 309

Query: 308 PSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFH 367
           P+ NVVVGSALIDMY+KCGS ++AYKVFE M+ERNV+SYSSMI+G+AMHG A +A++LF 
Sbjct: 310 PTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFD 369

Query: 368 DMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRA 427
           +MLKTEI+PN+VTFIG+L+ACSHAG+VEQG+QLFA ME+  GVAPS DHYACMVDLLGRA
Sbjct: 370 EMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRA 429

Query: 428 GCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLS 487
           G LEEAL+LVK MPM P+GGVWGALLGACRIHGNPD+AQIAA+ LF+LEPNGIGNYILLS
Sbjct: 430 GRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELEPNGIGNYILLS 489

Query: 488 NIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQAL 547
           NIYASAGRW++VSK+RK++R KG KKNPGCSW EGK G IH+FFAGD +HP+S EI+QAL
Sbjct: 490 NIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQAL 549

Query: 548 KQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNI 607
           + L++RL+  GY+PNL S  YD++D+EK+R+LMSHSEKLALA+GLL T AG TI+I+KN+
Sbjct: 550 EDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNL 609

Query: 608 RICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           RICEDCH+VMC AS+ITGREI+VRDNMRFHHF +G CSCGNFW
Sbjct: 610 RICEDCHSVMCGASQITGREIVVRDNMRFHHFRDGRCSCGNFW 647

BLAST of Csa4G045030 vs. NCBI nr
Match: gi|658005774|ref|XP_008338038.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g44230 [Malus domestica])

HSP 1 Score: 961.1 bits (2483), Expect = 1.0e-276
Identity = 464/652 (71.17%), Postives = 548/652 (84.05%), Query Frame = 1

Query: 1   MIGFSRNLSTVS--KLSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQI 60
           M   SR  STV   KL   Q  Q R  P  I F + Q +RKLLE +L+++L  C    Q+
Sbjct: 1   MQNLSRKFSTVPIHKLLPSQLHQHRPHPAEI-FSEFQQRRKLLEHKLVAVLDGCAGLRQV 60

Query: 61  KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYA 120
           K VH H++ +GL QC YVLTKLIR LTK+DVPM +YPLLVF Q+ YPNPFLWTAMIRGY+
Sbjct: 61  KAVHGHLLLHGLGQCCYVLTKLIRTLTKLDVPMDAYPLLVFRQIKYPNPFLWTAMIRGYS 120

Query: 121 LQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDL 180
           +QG +SES NFYT MR+ GVGPVSFTFSALFKACG  L+++LG+Q+HA TIL+GGF +DL
Sbjct: 121 IQGPVSESLNFYTCMRKSGVGPVSFTFSALFKACGDVLDVNLGRQIHAHTILVGGFVADL 180

Query: 181 YVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLK 240
           YVGN+MID+YVKCGFL C RKVFDEM ERDVVSWTELIVAY K GDMESA  LF+ LP K
Sbjct: 181 YVGNTMIDMYVKCGFLECGRKVFDEMPERDVVSWTELIVAYTKVGDMESARELFEGLPAK 240

Query: 241 DMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIR 300
           DMVAWTAMV GYAQN  P+EAL+ F++MQ  G+ TDE+TLAG+ISACAQLGA K+ANW+R
Sbjct: 241 DMVAWTAMVNGYAQNAHPREALDCFERMQCAGVGTDEITLAGLISACAQLGASKYANWVR 300

Query: 301 DIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGR 360
           DIAE+SGFGP+ NV+VGSALIDMYSKCGS D A+KVF+ MKERNVFSYSSMILG+AMHGR
Sbjct: 301 DIAEKSGFGPTENVLVGSALIDMYSKCGSLDNAFKVFQGMKERNVFSYSSMILGFAMHGR 360

Query: 361 AHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYA 420
           A +A++LFH+ML TEIRPNKVTFIG+L+ACSHAG+V+QGRQLFA MEK++ V P+ DHY 
Sbjct: 361 ASAAIELFHEMLTTEIRPNKVTFIGVLTACSHAGMVDQGRQLFATMEKYYDVVPTADHYT 420

Query: 421 CMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPN 480
           CMVDLLGRAG LEEALDLV+TMP++ +GGVWGALLGACR HGNPDIAQIAAN LF+LEP+
Sbjct: 421 CMVDLLGRAGRLEEALDLVETMPIDAHGGVWGALLGACRTHGNPDIAQIAANHLFELEPD 480

Query: 481 GIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHP 540
            IGNY++LSNIYASAGRW+EVS++RK++REKG KK P  SW E K G IH+F AG+TTHP
Sbjct: 481 SIGNYVVLSNIYASAGRWDEVSRVRKLMREKGLKKKPAYSWVETKKGVIHEFCAGETTHP 540

Query: 541 RSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAG 600
             +EI++ L+ L++RL ++GY+PNL SA Y + DDEK RILMSHSEKLALAY LL T++ 
Sbjct: 541 EYTEIKKTLEDLLDRLLANGYQPNLDSAAYAVGDDEKTRILMSHSEKLALAYALLSTDSV 600

Query: 601 DTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
            TIKIMKNIRICEDCH+ MC AS++TGREI+VRDNMRFHHFHNGTCSCGNFW
Sbjct: 601 STIKIMKNIRICEDCHSFMCGASQVTGREIVVRDNMRFHHFHNGTCSCGNFW 651

BLAST of Csa4G045030 vs. NCBI nr
Match: gi|595814629|ref|XP_007203772.1| (hypothetical protein PRUPE_ppa002597mg [Prunus persica])

HSP 1 Score: 958.4 bits (2476), Expect = 6.5e-276
Identity = 461/654 (70.49%), Postives = 550/654 (84.10%), Query Frame = 1

Query: 1   MIGFSRNLSTVS--KLSHLQNLQTRGSPN--FIPFPQLQHQRKLLEWRLMSILHDCTLFS 60
           M   SR  STV   KL   Q  Q +  P   FIPF + Q +RKLLE +L+S L  C   S
Sbjct: 1   MQNLSRRFSTVPIHKLLPQQLHQHQPQPTRFFIPFSEFQQKRKLLEHKLISDLDGCDNLS 60

Query: 61  QIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRG 120
           Q+K+VHAH++R+GLSQC YVLTKL+R LTK+ VP+ +YP LVF QV YPNPFLWTAMIRG
Sbjct: 61  QVKEVHAHLLRHGLSQCCYVLTKLVRTLTKLGVPVDAYPRLVFVQVKYPNPFLWTAMIRG 120

Query: 121 YALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFAS 180
           Y +QG +SE+ NFYT MR  G GPVSFTFSALFKACG  L+++LG+Q+HAQTIL+GGFA+
Sbjct: 121 YTVQGPISEALNFYTCMRSAGTGPVSFTFSALFKACGDVLDVNLGRQIHAQTILVGGFAA 180

Query: 181 DLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLP 240
           DLYVGN+MID+YVKCGFL C RKVFDEM +RDVVSWTELIVAY K GDM SA  LF+ LP
Sbjct: 181 DLYVGNTMIDMYVKCGFLDCGRKVFDEMPDRDVVSWTELIVAYTKIGDMGSARELFEGLP 240

Query: 241 LKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANW 300
           +KDMVAWTAMVTGYAQN RP++AL+ F++MQ  G+ TDE+TL G+ISACAQLGA K+ANW
Sbjct: 241 VKDMVAWTAMVTGYAQNARPRDALDCFERMQGAGVGTDEITLVGLISACAQLGASKYANW 300

Query: 301 IRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMH 360
           +RDIAE+SGFGP+ NV+VGSALIDMYSKCGS DEAYKVF+ MKERNVFSYSSMILG+AMH
Sbjct: 301 VRDIAEKSGFGPTENVLVGSALIDMYSKCGSLDEAYKVFQGMKERNVFSYSSMILGFAMH 360

Query: 361 GRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDH 420
           GRA++A++LFH+ML TEIRPN+VTFIG+L+ACSHAG+V+QGRQLFA MEK++ V PS DH
Sbjct: 361 GRANAAIELFHEMLTTEIRPNRVTFIGVLTACSHAGMVDQGRQLFATMEKYYNVVPSADH 420

Query: 421 YACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLE 480
           Y CMVDLLGRAG LEEAL+LV+TMP+  +GGVWGALLGAC IHGNPDIAQIAAN LF+LE
Sbjct: 421 YTCMVDLLGRAGRLEEALELVETMPIAAHGGVWGALLGACHIHGNPDIAQIAANHLFELE 480

Query: 481 PNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTT 540
           P+ IGN+++LSNIYASAGRW +VS++RK+++EKG KKNP  SW E K G IH+F AG+T 
Sbjct: 481 PDSIGNHVMLSNIYASAGRWADVSRVRKMMKEKGLKKNPAYSWVETKKGVIHEFCAGETN 540

Query: 541 HPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTE 600
           HP  +EI++AL  L+ RL++HGY+PNL SA YDL  +E++RILMSHSEKLALAY L+ T+
Sbjct: 541 HPEYAEIKKALDDLLNRLQAHGYQPNLNSAAYDLGIEERKRILMSHSEKLALAYALVSTD 600

Query: 601 AGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           +G TIKIMKNIRICEDCH  MC AS++ GREI+VRDNMRFHHF NG CSCGNFW
Sbjct: 601 SGSTIKIMKNIRICEDCHVFMCGASQVAGREIVVRDNMRFHHFSNGKCSCGNFW 654

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP417_ARATH1.2e-22459.91Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana GN... [more]
PP367_ARATH9.2e-13739.61Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN... [more]
PP449_ARATH2.5e-13439.67Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN... [more]
PP175_ARATH5.6e-13442.34Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
PP354_ARATH6.2e-13342.21Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... [more]
Match NameE-valueIdentityDescription
F6GWS8_VITVI6.8e-28072.47Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g02490 PE=4 SV=... [more]
M5VV81_PRUPE4.6e-27670.49Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002597mg PE=4 SV=1[more]
A0A061DFG9_THECC4.9e-27067.78Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_000... [more]
V4SE67_9ROSI1.9e-26968.76Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025108mg PE=4 SV=1[more]
A0A0D2NUT2_GOSRA6.0e-26067.30Uncharacterized protein OS=Gossypium raimondii GN=B456_003G012700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G44230.16.6e-22659.91 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G06540.15.2e-13839.61 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G66520.11.4e-13539.67 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G29760.13.1e-13542.34 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G37380.13.5e-13442.21 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449457516|ref|XP_004146494.1|0.0e+00100.00PREDICTED: pentatricopeptide repeat-containing protein At5g44230 [Cucumis sativu... [more]
gi|659102402|ref|XP_008452110.1|0.0e+0096.46PREDICTED: pentatricopeptide repeat-containing protein At5g44230 [Cucumis melo][more]
gi|225431281|ref|XP_002268784.1|9.8e-28072.47PREDICTED: pentatricopeptide repeat-containing protein At5g44230 [Vitis vinifera... [more]
gi|658005774|ref|XP_008338038.1|1.0e-27671.17PREDICTED: pentatricopeptide repeat-containing protein At5g44230 [Malus domestic... [more]
gi|595814629|ref|XP_007203772.1|6.5e-27670.49hypothetical protein PRUPE_ppa002597mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU122259cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G045030.1Csa4G045030.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU122259CU122259transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 109..138
score: 3.4E-4coord: 182..208
score: 1.2E-4coord: 417..441
score: 0.024coord: 210..235
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 342..389
score: 4.4E-10coord: 238..286
score: 9.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 344..377
score: 2.6E-6coord: 182..210
score: 1.2E-4coord: 317..343
score: 1.8E-4coord: 109..140
score: 0.0023coord: 241..274
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 274..308
score: 7.848coord: 377..407
score: 7.991coord: 239..273
score: 11.948coord: 413..443
score: 7.465coord: 342..376
score: 11.674coord: 177..211
score: 9.482coord: 311..341
score: 9.58coord: 479..513
score: 7.344coord: 106..140
score: 10
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 205..373
score: 1.6E-10coord: 443..507
score: 1.6
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 452..498
score: 5.69E-5coord: 326..359
score: 5.69E-5coord: 219..263
score: 5.6
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 32..40
score: 3.2E-292coord: 60..520
score: 3.2E
NoneNo IPR availablePANTHERPTHR24015:SF264SUBFAMILY NOT NAMEDcoord: 32..40
score: 3.2E-292coord: 60..520
score: 3.2E

The following gene(s) are paralogous to this gene:

None