Csa4G015120 (gene) Cucumber (Chinese Long) v2

NameCsa4G015120
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 1987706 .. 1988094 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGATGAAACTACCGACCAAAATCCGGCCATTTCTTCCTTTCTCGACTTTCAACCTTCACAATCACACGTGCTATCTCCAACCCCAATCGCTCTTTTACCGAAAGTACGCTTGCCTTTCCCTTTCAATTACGTCACTGCCACCATCTCAACTGAGTCAAAAGTGACTCAAATCGTCTGGGTAAATTCGAAAATAGCGAGAACTTGAAGGGGCAGTATGGAAAAACTTTGGTGTTTGGAGTGCAGGTCTGAATCGAAGCTTCTCTGTTCAGCTGTGAAAATTTCTTTCTTGGCGTTGTATTCTCTTTTTGACTTTGATTCTAAACCGAACCCATATCTCTTTTCTTGTGAAATTCTTGAGTTTCCTCATGCCTATTCATATCTCTGA

mRNA sequence

ATGCCGATGAAACTACCGACCAAAATCCGGCCATTTCTTCCTTTCTCGACTTTCAACCTTCACAATCACACGTGCTATCTCCAACCCCAATCGCTCTTTTACCGAAAGTACGCTTGCCTTTCCCTTTCAATTACGTCACTGCCACCATCTCAACTGAGTCAAAAGTCTGAATCGAAGCTTCTCTGTTCAGCTGTGAAAATTTCTTTCTTGGCGTTGTATTCTCTTTTTGACTTTGATTCTAAACCGAACCCATATCTCTTTTCTTGTGAAATTCTTGAGTTTCCTCATGCCTATTCATATCTCTGA

Coding sequence (CDS)

ATGCCGATGAAACTACCGACCAAAATCCGGCCATTTCTTCCTTTCTCGACTTTCAACCTTCACAATCACACGTGCTATCTCCAACCCCAATCGCTCTTTTACCGAAAGTACGCTTGCCTTTCCCTTTCAATTACGTCACTGCCACCATCTCAACTGAGTCAAAAGTCTGAATCGAAGCTTCTCTGTTCAGCTGTGAAAATTTCTTTCTTGGCGTTGTATTCTCTTTTTGACTTTGATTCTAAACCGAACCCATATCTCTTTTCTTGTGAAATTCTTGAGTTTCCTCATGCCTATTCATATCTCTGA

Protein sequence

MPMKLPTKIRPFLPFSTFNLHNHTCYLQPQSLFYRKYACLSLSITSLPPSQLSQKSESKLLCSAVKISFLALYSLFDFDSKPNPYLFSCEILEFPHAYSYL*
BLAST of Csa4G015120 vs. TrEMBL
Match: A0A0A0KYZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G015120 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 4.9e-52
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1

Query: 1   MPMKLPTKIRPFLPFSTFNLHNHTCYLQPQSLFYRKYACLSLSITSLPPSQLSQKSESKL 60
           MPMKLPTKIRPFLPFSTFNLHNHTCYLQPQSLFYRKYACLSLSITSLPPSQLSQKSESKL
Sbjct: 1   MPMKLPTKIRPFLPFSTFNLHNHTCYLQPQSLFYRKYACLSLSITSLPPSQLSQKSESKL 60

Query: 61  LCSAVKISFLALYSLFDFDSKPNPYLFSCEILEFPHAYSYL 102
           LCSAVKISFLALYSLFDFDSKPNPYLFSCEILEFPHAYSYL
Sbjct: 61  LCSAVKISFLALYSLFDFDSKPNPYLFSCEILEFPHAYSYL 101

BLAST of Csa4G015120 vs. NCBI nr
Match: gi|700197913|gb|KGN53071.1| (hypothetical protein Csa_4G015120 [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 7.1e-52
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1

Query: 1   MPMKLPTKIRPFLPFSTFNLHNHTCYLQPQSLFYRKYACLSLSITSLPPSQLSQKSESKL 60
           MPMKLPTKIRPFLPFSTFNLHNHTCYLQPQSLFYRKYACLSLSITSLPPSQLSQKSESKL
Sbjct: 1   MPMKLPTKIRPFLPFSTFNLHNHTCYLQPQSLFYRKYACLSLSITSLPPSQLSQKSESKL 60

Query: 61  LCSAVKISFLALYSLFDFDSKPNPYLFSCEILEFPHAYSYL 102
           LCSAVKISFLALYSLFDFDSKPNPYLFSCEILEFPHAYSYL
Sbjct: 61  LCSAVKISFLALYSLFDFDSKPNPYLFSCEILEFPHAYSYL 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KYZ7_CUCSA4.9e-52100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G015120 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700197913|gb|KGN53071.1|7.1e-52100.00hypothetical protein Csa_4G015120 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU097163cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G015120.1Csa4G015120.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU097163CU097163transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None