Csa4G006260 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G006260
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
Description30S ribosomal protein S15; contains IPR000589 (Ribosomal protein S15)
LocationChr4 : 1008350 .. 1011614 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTCTTCTTCTTCTTCATCAGTTTCCCATACAATGGCGCTTCAACTCACCTTCAAACCCAAAACCCCTAAAACTCTCACTAATCCTTCTCTCATCCATCTTTTCTCCTCCAATTCCTCTGCCCCATCTGATCCGAATGACGAAACCGCCGATACATCCACTGCCTCACCTCGATCTTCCATCTCCTCTTATCTCAGCGATGTCAGAGCCCGCCTCAAACAGGACCAGCAATTTTCTTCTTCACCCTCCGCTAGAAGACCTGCCGACTCATTCACTTCTCCTTTCAATCGCTCGACTTCTCCGGCTTCCAAAGCCGCCTCACTTGAAGAAATCAGAAAAAATCTCTCTGAATTTCGGAACCGATCGTCTGTGCCTCCTCCCTCCGACCTCGGTTCTACACCTTCCTCTTCTTCGTCTTGGCAGCGTGGTATCTCGTTTCAAGATCTGTACAAGAATAATAGCATGAGAAAGGGTGAGGATAGTAATGATGCACCTGCAAATTCGACGGGAGGTGGCCGTATCGGTATGCCATTTGATTCTATTAAGGAGAGCTTACGGAAGGTGAGTTCAGCGAGGGGGATGCAAAGTGAACTGAAGAGTGGGGATTCGTTGTCTTTATCGGCGTTTAAGGACAGCTTGAAATTGAAACCATCGGACCCGGTGATGGGTGGGACAGAGAGGTTACCAGTGTCGGTTTTTGGGAAGGAAATGAAGGAAAAAAAAGATGGGAAGAATGTGGGATTGAAGACGGAGTTCGTGAAGATGTATAGCTATGATGAACTGGGAAATAAGTTGAGAAATTTGAGGCCAGATAAAGAAAAAGGGAAGAATTGGTTTTCATTGACGGAGTTGAATGACAGGTTGGTGAAGCTTAGAACAATGGAGGAGAAGGAGACTGAGTCGAGAATTGGAGGGATTTCATTTCAGGATTTGAGAGCGAGCTTGATGCAGATGAAGATTTCTGATGATGAAAGGGAAAAAAAAGCGACACGTGAGTAAACAAATTTGTGCGTGGTTATGAATTATAAATACTTTTCTTCAGAAATGTTCAAAGAAATTTGATTGTGTTATTGAAACTAGTCTGGAAGAGTAAATGGACTAAAAATTCTGCCAAATAATAAATGCCCATTTAAATGCTGGAACTTTAAAAAGTTAGAATGGGAGCCATCTTAAGTTTATAGTAGGGAAGCTATGTAGAGCATATGAACTTCTAAGGGTGTTTTTAGTTTTAATAATTTAGAGTTTGCAAAATGGAGAGAGTAAGATAATATAATCAAAATAGTTTAAACAAAAATGACTTCTTTGAAGAGCACTATTTTCTTTAGTAAGGAAGCTATGTAAAGCAAATGAACTAGTAAGGGCTGATAATATGGTCACTTCATAGTTCACATGCTCCTACTTTTTGGTTTTGTAGAGGAAATCTTCATAATGTAGCATCTCTCTTGGACGTTAGTCATTTGAACTGTTATCTTGGTCCTACTGTGGGGGGAGTGAGCACTTTTACTTGATTCACTGAAAGTTTGAAATTGTTTCATTTTTTGTCACCCAGTCCAGCGGCTCGATATCATGGGTCAGCTAGTTCGAACACCAAACTATATGCTAGAACCTCCAAATGAACATCTTGTCGAGAAGGTATGAGATTCCATTTAGTAATATTAGCTAGTTTTAGCTTTTCTTTTCATTGAACAATTTAAAACTATTATAGCCCTTGAAAGTAATGGATGCTGGACTACACATAGTTGGTTGTCCTATTGTTTGCTACATTTCTAGCTCAGCGCTTGTTCATTGTTACCTTTGGATTCTGCAATGGTAATAAGAATATTCATTTTTTTCTGTTCTGTTCTTCAAATCGTCCAAGGTAATCGCTTTCCTGATTATTTTTAACCTTTTATCCTTAAATAGAAGGAAGCTCCAGATTTTCAAGGTTGCAGTCGAAGTTTCACACTGCTGTTTCATTCTGCTTATTTCATTTAAAAGTTTAACTACTTGATTTTGCTTTATCATTTACTCAAGTCAGTAACTTCATGCAGTATTTCCATCCGGATAACATGTCATCTGCCGAAAAGATGAAAATTGAGCTAGCAAAAGTTAGAGAAAAATTTAAAATGTCAGAATCAGACTGTGGATCTGCTCGTGTTCAAGGTATATCTTTTGACTGGAATAGTTTTAACCATTCATCTCCTCCAACCTAATTCTGGAACACATGTCACCAACCTTCTTCCCCCTCCATTACTTTTGTAGTTCTTTAAGGCTGTGTAATTTAACAGATACGAGACTAGGAGGTTTCATTTTCACACTAAAGATTTTGACATCCTTTTGATTTTTATCTCTGATTCAAATAATGCTTAATTTTGTGCTCTATGTACTCTGCAGTTGCTCAACTGACCACTAAAATCAATCATCTAACTGCCGTCCTGCACAAGAAGGTAAATGAAAGCTGGAATCTCTCTCCTTGGATGTATCATTTATCTATGAAATGTTTCTTATACAATAAAGATCATAGTTAACTTGTGTTGTATTGAGTTTTCATATCTGGTTTTAGGAGTCGTATCTCCCCCTTACTAATTTGCAAACATTTTTTCATCTGATTCTGTGCCTACCAAAAGGGGGTGGGTGTTCAAACCTCCAACCTTGAGGTTATAGCATGTACTTGATTGATCCCAATCGAGCTATGCTTATTTTTTACATTCTTTTTACTATTTGTGGTCACATCACTAATCACTAATGTAGAAATTGGTTATTATGTTTCAGGATAAGCATTCTAAGAAAGGTCTGCTTGGAATGGTACAACAGAGGAAAAAGCTACTGAAGTATCTTCGACGAACCGATTGGGATTCCTACTGTATGATTCTTAACACACTTGGTCTTCGAGACAACCCGGATTACAAGGCCTGAGTTCACGTGGTTCTCCTGTCCTTCTCTTTCCCGAGGTTTGCTCTTCAGTTTTGTTGGAGAGAAAGTTCTGTGATATTAAAATTTATGTCATCATATCATGAAGAGAGAAGCCTCGAGCTTGTTGGCATGAAAGGCAAATTGGCATTGGAAGCGTGGAGATAGTTTATTGCTAGAATAGGAAAGTGCAAATTTTTTAAGTTTTATTTCAATAGATTGATTGTATTAGCAAATCCTGGTCTGATTTAATTTTTTTTTTTTTTTTGTGGGAATTCATTCCTTTATAGCTGCAAAATGAACTGCCCTGCTTCTGCTGGCAAATAATGGATTTGAAAGTAAAGTGCTCTGCAACAATTTTAGCCTGCAGTTGAAC

mRNA sequence

ATGGCGCTTCAACTCACCTTCAAACCCAAAACCCCTAAAACTCTCACTAATCCTTCTCTCATCCATCTTTTCTCCTCCAATTCCTCTGCCCCATCTGATCCGAATGACGAAACCGCCGATACATCCACTGCCTCACCTCGATCTTCCATCTCCTCTTATCTCAGCGATGTCAGAGCCCGCCTCAAACAGGACCAGCAATTTTCTTCTTCACCCTCCGCTAGAAGACCTGCCGACTCATTCACTTCTCCTTTCAATCGCTCGACTTCTCCGGCTTCCAAAGCCGCCTCACTTGAAGAAATCAGAAAAAATCTCTCTGAATTTCGGAACCGATCGTCTGTGCCTCCTCCCTCCGACCTCGGTTCTACACCTTCCTCTTCTTCGTCTTGGCAGCGTGGTATCTCGTTTCAAGATCTGTACAAGAATAATAGCATGAGAAAGGGTGAGGATAGTAATGATGCACCTGCAAATTCGACGGGAGGTGGCCGTATCGGTATGCCATTTGATTCTATTAAGGAGAGCTTACGGAAGGTGAGTTCAGCGAGGGGGATGCAAAGTGAACTGAAGAGTGGGGATTCGTTGTCTTTATCGGCGTTTAAGGACAGCTTGAAATTGAAACCATCGGACCCGGTGATGGGTGGGACAGAGAGGTTACCAGTGTCGGTTTTTGGGAAGGAAATGAAGGAAAAAAAAGATGGGAAGAATGTGGGATTGAAGACGGAGTTCGTGAAGATGTATAGCTATGATGAACTGGGAAATAAGTTGAGAAATTTGAGGCCAGATAAAGAAAAAGGGAAGAATTGGTTTTCATTGACGGAGTTGAATGACAGGTTGGTGAAGCTTAGAACAATGGAGGAGAAGGAGACTGAGTCGAGAATTGGAGGGATTTCATTTCAGGATTTGAGAGCGAGCTTGATGCAGATGAAGATTTCTGATGATGAAAGGGAAAAAAAAGCGACACTCCAGCGGCTCGATATCATGGGTCAGCTAGTTCGAACACCAAACTATATGCTAGAACCTCCAAATGAACATCTTGTCGAGAAGTATTTCCATCCGGATAACATGTCATCTGCCGAAAAGATGAAAATTGAGCTAGCAAAAGTTAGAGAAAAATTTAAAATGTCAGAATCAGACTGTGGATCTGCTCGTGTTCAAGTTGCTCAACTGACCACTAAAATCAATCATCTAACTGCCGTCCTGCACAAGAAGGATAAGCATTCTAAGAAAGGTCTGCTTGGAATGGTACAACAGAGGAAAAAGCTACTGAAGTATCTTCGACGAACCGATTGGGATTCCTACTGTATGATTCTTAACACACTTGGTCTTCGAGACAACCCGGATTACAAGGCCTGA

Coding sequence (CDS)

ATGGCGCTTCAACTCACCTTCAAACCCAAAACCCCTAAAACTCTCACTAATCCTTCTCTCATCCATCTTTTCTCCTCCAATTCCTCTGCCCCATCTGATCCGAATGACGAAACCGCCGATACATCCACTGCCTCACCTCGATCTTCCATCTCCTCTTATCTCAGCGATGTCAGAGCCCGCCTCAAACAGGACCAGCAATTTTCTTCTTCACCCTCCGCTAGAAGACCTGCCGACTCATTCACTTCTCCTTTCAATCGCTCGACTTCTCCGGCTTCCAAAGCCGCCTCACTTGAAGAAATCAGAAAAAATCTCTCTGAATTTCGGAACCGATCGTCTGTGCCTCCTCCCTCCGACCTCGGTTCTACACCTTCCTCTTCTTCGTCTTGGCAGCGTGGTATCTCGTTTCAAGATCTGTACAAGAATAATAGCATGAGAAAGGGTGAGGATAGTAATGATGCACCTGCAAATTCGACGGGAGGTGGCCGTATCGGTATGCCATTTGATTCTATTAAGGAGAGCTTACGGAAGGTGAGTTCAGCGAGGGGGATGCAAAGTGAACTGAAGAGTGGGGATTCGTTGTCTTTATCGGCGTTTAAGGACAGCTTGAAATTGAAACCATCGGACCCGGTGATGGGTGGGACAGAGAGGTTACCAGTGTCGGTTTTTGGGAAGGAAATGAAGGAAAAAAAAGATGGGAAGAATGTGGGATTGAAGACGGAGTTCGTGAAGATGTATAGCTATGATGAACTGGGAAATAAGTTGAGAAATTTGAGGCCAGATAAAGAAAAAGGGAAGAATTGGTTTTCATTGACGGAGTTGAATGACAGGTTGGTGAAGCTTAGAACAATGGAGGAGAAGGAGACTGAGTCGAGAATTGGAGGGATTTCATTTCAGGATTTGAGAGCGAGCTTGATGCAGATGAAGATTTCTGATGATGAAAGGGAAAAAAAAGCGACACTCCAGCGGCTCGATATCATGGGTCAGCTAGTTCGAACACCAAACTATATGCTAGAACCTCCAAATGAACATCTTGTCGAGAAGTATTTCCATCCGGATAACATGTCATCTGCCGAAAAGATGAAAATTGAGCTAGCAAAAGTTAGAGAAAAATTTAAAATGTCAGAATCAGACTGTGGATCTGCTCGTGTTCAAGTTGCTCAACTGACCACTAAAATCAATCATCTAACTGCCGTCCTGCACAAGAAGGATAAGCATTCTAAGAAAGGTCTGCTTGGAATGGTACAACAGAGGAAAAAGCTACTGAAGTATCTTCGACGAACCGATTGGGATTCCTACTGTATGATTCTTAACACACTTGGTCTTCGAGACAACCCGGATTACAAGGCCTGA

Protein sequence

MALQLTFKPKTPKTLTNPSLIHLFSSNSSAPSDPNDETADTSTASPRSSISSYLSDVRARLKQDQQFSSSPSARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFRNRSSVPPPSDLGSTPSSSSSWQRGISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSIKESLRKVSSARGMQSELKSGDSLSLSAFKDSLKLKPSDPVMGGTERLPVSVFGKEMKEKKDGKNVGLKTEFVKMYSYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKLRTMEEKETESRIGGISFQDLRASLMQMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPPNEHLVEKYFHPDNMSSAEKMKIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGLLGMVQQRKKLLKYLRRTDWDSYCMILNTLGLRDNPDYKA*
Homology
[Close]
BLAST of Csa4G006260 vs. Swiss-Prot
Match: RS15_HELMI (30S ribosomal protein S15 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=rpsO PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.2e-13
Identity = 42/75 (56.00%), Postives = 51/75 (68.00%), Query Frame = 1 

Query: 370 KFKMSESDCGSARVQVAQLTTKINHLTAVL--HKKDKHSKKGLLGMVQQRKKLLKYLRRT 429
           KFK  E D GS  VQ+A LT +IN+LT  L  HKKD HS++GLL MV QR+ LL YL+RT
Sbjct: 14  KFKQHEKDTGSPEVQIAILTDRINYLTGHLKTHKKDHHSRRGLLKMVGQRRNLLAYLKRT 73

Query: 430 DWDSYCMILNTLGLR 443
           D + Y  ++  LGLR
Sbjct: 74  DIERYRKLVTELGLR 88

[Close]
BLAST of Csa4G006260 vs. Swiss-Prot
Match: RS15_KLEP3 (30S ribosomal protein S15 OS=Klebsiella pneumoniae (strain 342) GN=rpsO PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.5e-13
Identity = 42/80 (52.50%), Postives = 50/80 (62.50%), Query Frame = 1 

Query: 365 AKVREKFKMSESDCGSARVQVAQLTTKINHLTAVL--HKKDKHSKKGLLGMVQQRKKLLK 424
           AK+  +F   E+D GS  VQVA LT +INHL      HKKD HS++GLL MV QR+KLL 
Sbjct: 9   AKIVSEFGRGENDSGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68

Query: 425 YLRRTDWDSYCMILNTLGLR 443
           YL+R D   Y  ++  LGLR
Sbjct: 69  YLKRKDVARYAALIERLGLR 88

[Close]
BLAST of Csa4G006260 vs. Swiss-Prot
Match: RS15_KLEP7 (30S ribosomal protein S15 OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=rpsO PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.0e-13
Identity = 42/80 (52.50%), Postives = 50/80 (62.50%), Query Frame = 1 

Query: 365 AKVREKFKMSESDCGSARVQVAQLTTKINHLTAVL--HKKDKHSKKGLLGMVQQRKKLLK 424
           AK+  +F   E+D GS  VQVA LT +INHL      HKKD HS++GLL MV QR+KLL 
Sbjct: 9   AKIVSEFGRGENDSGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68

Query: 425 YLRRTDWDSYCMILNTLGLR 443
           YL+R D   Y  ++  LGLR
Sbjct: 69  YLKRKDVARYSALIERLGLR 88

[Close]
BLAST of Csa4G006260 vs. Swiss-Prot
Match: RS15_DICT6 (30S ribosomal protein S15 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rpsO PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.0e-13
Identity = 41/84 (48.81%), Postives = 56/84 (66.67%), Query Frame = 1 

Query: 361 KIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVL--HKKDKHSKKGLLGMVQQRK 420
           K E  ++ EKF+++E+D GS  VQ+A LT +I  LT  L  HKKD HS+ GLL M+ +R+
Sbjct: 5   KEEKKQIIEKFRLNENDSGSPEVQIALLTERIKRLTEHLKVHKKDYHSRVGLLKMIGRRR 64

Query: 421 KLLKYLRRTDWDSYCMILNTLGLR 443
           KLLKYL+  D++ Y  ++  LGLR
Sbjct: 65  KLLKYLQEKDFERYKKLIQELGLR 88

[Close]
BLAST of Csa4G006260 vs. Swiss-Prot
Match: RS15_PSELT (30S ribosomal protein S15 OS=Pseudothermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / NBRC 107922 / TMO) GN=rpsO PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.0e-13
Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 1 

Query: 363 ELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVL--HKKDKHSKKGLLGMVQQRKKL 422
           E  K+ E+F+++E D GSA VQVA LT +I HLT  L  H KD HS++GL+ MV +R+KL
Sbjct: 5   EKKKIIEQFRINEKDTGSAEVQVAILTARIRHLTEHLKAHPKDFHSRRGLMKMVGRRRKL 64

Query: 423 LKYLRRTDWDSYCMILNTLGLR 443
           L+YLR+++ +SY  ++  L LR
Sbjct: 65  LRYLRKSNPESYKSLIEKLNLR 86

[Close]
BLAST of Csa4G006260 vs. TrEMBL
Match: A0A0A0KVK2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006260 PE=3 SV=1)

HSP 1 Score: 885.6 bits (2287), Expect = 2.6e-254
Identity = 449/449 (100.00%), Postives = 449/449 (100.00%), Query Frame = 1 

Query: 1   MALQLTFKPKTPKTLTNPSLIHLFSSNSSAPSDPNDETADTSTASPRSSISSYLSDVRAR 60
           MALQLTFKPKTPKTLTNPSLIHLFSSNSSAPSDPNDETADTSTASPRSSISSYLSDVRAR
Sbjct: 1   MALQLTFKPKTPKTLTNPSLIHLFSSNSSAPSDPNDETADTSTASPRSSISSYLSDVRAR 60

Query: 61  LKQDQQFSSSPSARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFRNRSSVPPPSDLG 120
           LKQDQQFSSSPSARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFRNRSSVPPPSDLG
Sbjct: 61  LKQDQQFSSSPSARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFRNRSSVPPPSDLG 120

Query: 121 STPSSSSSWQRGISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSIKESLRKVSSA 180
           STPSSSSSWQRGISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSIKESLRKVSSA
Sbjct: 121 STPSSSSSWQRGISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSIKESLRKVSSA 180

Query: 181 RGMQSELKSGDSLSLSAFKDSLKLKPSDPVMGGTERLPVSVFGKEMKEKKDGKNVGLKTE 240
           RGMQSELKSGDSLSLSAFKDSLKLKPSDPVMGGTERLPVSVFGKEMKEKKDGKNVGLKTE
Sbjct: 181 RGMQSELKSGDSLSLSAFKDSLKLKPSDPVMGGTERLPVSVFGKEMKEKKDGKNVGLKTE 240

Query: 241 FVKMYSYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKLRTMEEKETESRIGGISFQDL 300
           FVKMYSYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKLRTMEEKETESRIGGISFQDL
Sbjct: 241 FVKMYSYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKLRTMEEKETESRIGGISFQDL 300

Query: 301 RASLMQMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPPNEHLVEKYFHPDNMSSAEKM 360
           RASLMQMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPPNEHLVEKYFHPDNMSSAEKM
Sbjct: 301 RASLMQMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPPNEHLVEKYFHPDNMSSAEKM 360

Query: 361 KIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGLLGMVQQRKKL 420
           KIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGLLGMVQQRKKL
Sbjct: 361 KIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGLLGMVQQRKKL 420

Query: 421 LKYLRRTDWDSYCMILNTLGLRDNPDYKA 450
           LKYLRRTDWDSYCMILNTLGLRDNPDYKA
Sbjct: 421 LKYLRRTDWDSYCMILNTLGLRDNPDYKA 449

[Close]
BLAST of Csa4G006260 vs. TrEMBL
Match: M5WYW8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005542mg PE=3 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 4.6e-134
Identity = 265/457 (57.99%), Postives = 340/457 (74.40%), Query Frame = 1 

Query: 1   MALQLTFKPKTPKTLTNPSLIHLFSSNSSA-PSDPND--ETADTSTASPRSSISSYLSDV 60
           M LQL  + +T   LT P L HLFS+ +S+ PSDP D  +  D +  S  SS++SY SDV
Sbjct: 1   MTLQLRARHRT---LTKPPLTHLFSTTTSSDPSDPKDPKDPTDPNPQSHSSSLTSYFSDV 60

Query: 61  RARLKQDQQFSSSPSARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFRNRSSVPPPS 120
           +A LKQ QQ       RRP     S  N   S  S AASLEEIRKNLSEFR RS+VP P+
Sbjct: 61  KASLKQQQQ--QPQQQRRPISQNPSFSNHPLSRTSGAASLEEIRKNLSEFRRRSAVPEPT 120

Query: 121 DLGSTPSSSSSWQRG----ISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSIKES 180
           D  S PS  SS  +G    +SFQ+LY  N + K ED N     +  GG++   F++I+ES
Sbjct: 121 DSNSAPSQQSSTAQGSTQQVSFQELYNRNVLGKSEDPN-----ADKGGKLS--FNAIRES 180

Query: 181 LRKVSSARGMQSELKSGDSLSLSAFKDSLKLKPSDPVMGGTERLPVSVFGKEM---KEKK 240
           L+K+ S   +QS+ KS D +SLSAF +SLKLKP+  V+GGT+ LP+S+FGKE    + ++
Sbjct: 181 LKKIKSNTNVQSDRKSVDPMSLSAFTNSLKLKPN--VIGGTDTLPMSIFGKEKIKGRNEE 240

Query: 241 DGKNVGLKTEFVKMYSYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKLRTMEEKETES 300
           +G +  +KT+FVK+Y + ELG KLR LRP+  KG +WFSL ELN+RL+KLR MEE ET++
Sbjct: 241 EG-SYAMKTDFVKLYDHAELGEKLRRLRPEA-KGDSWFSLKELNERLMKLREMEEMETQA 300

Query: 301 RIGGISFQDLRASLMQMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPPNEHLVEKYFH 360
            + G+SF+DLR SL+++KISD+E+ KK ++QRLDI+GQ  RTP++ML+PP EHLVEKYFH
Sbjct: 301 AMSGVSFRDLRDSLVKLKISDEEKVKKTSIQRLDILGQFGRTPSFMLQPPKEHLVEKYFH 360

Query: 361 PDNMSSAEKMKIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGL 420
           PDNMSSAEK+KIELAKVRE+FKMSESDCGSARVQVAQLTTKI HL++VLHKKDKHS+KGL
Sbjct: 361 PDNMSSAEKLKIELAKVREEFKMSESDCGSARVQVAQLTTKIKHLSSVLHKKDKHSRKGL 420

Query: 421 LGMVQQRKKLLKYLRRTDWDSYCMILNTLGLRDNPDY 448
             M+Q+RK+LLKYLR+TDWDSYC +L+ LGLRD P++
Sbjct: 421 QAMLQRRKRLLKYLRKTDWDSYCFVLSKLGLRDKPEF 441

[Close]
BLAST of Csa4G006260 vs. TrEMBL
Match: A0A061G9Z2_THECC (Structural constituent of ribosome, putative OS=Theobroma cacao GN=TCM_027358 PE=3 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 1.4e-130
Identity = 264/464 (56.90%), Postives = 337/464 (72.63%), Query Frame = 1 

Query: 1   MALQLTFKPKTPKTLTNPSLIHLFSSNSSAPSDPNDETADTSTA--SPRSS----ISSYL 60
           MAL L  +PK  ++LTNPSL HL S+ S+ P+  N  T D+++   SP S     ISSY 
Sbjct: 1   MALHLA-RPKR-RSLTNPSLCHLLSTFSNHPNSENTTTTDSNSPGNSPSSDNPSLISSYF 60

Query: 61  SDVRARLKQDQQFSSSPSARRPADSFTSPFNRSTSPASK----AASLEEIRKNLSEFRNR 120
           SD++A LK         S  RP   F+      +SP SK    +A + EIRKNLS++R R
Sbjct: 61  SDIKAGLKHQ-------SNERPTSPFSRNRTNPSSPTSKTIPMSAFVAEIRKNLSDYRER 120

Query: 121 SSVPPPSDLGSTPSSSSSWQRGISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSI 180
           S+VPPP++  + PS S   +  ISFQ++YK N+  K  DSN  PA+S  G ++G  F++I
Sbjct: 121 SAVPPPTESSAIPSQS---RPHISFQEIYKRNASAKQGDSNVNPASSGPGRKLG--FETI 180

Query: 181 KESLRKVSSARGMQS-ELKSGDSLSLSAFKDSLKLKPSD-----PVMGGTERLPVSVFGK 240
           +ESL K+    G  + E K+G   SLS +K+S KLKPS+     PV+GGTE LP SVFG+
Sbjct: 181 RESLGKIKKKPGATNVEEKTGPFWSLSHYKESFKLKPSEGNVVYPVIGGTE-LPKSVFGR 240

Query: 241 EMKEKKDGKNVGLKTEFVKMYSYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKLRTME 300
           EM E+       +KTEFVKMYSY ELG +L+ LRP+++ G+ WFSL ELN+RL+KLR M+
Sbjct: 241 EMTERTKEGEAAMKTEFVKMYSYGELGMRLKQLRPERKGGEGWFSLQELNERLMKLREMD 300

Query: 301 EKETESRIGGISFQDLRASLMQMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPPNEHL 360
            KE+ESRIG  +F+DLR SL  +K +DDE++K+  +QR+DI+  L RTPN+ML PP EHL
Sbjct: 301 SKESESRIGE-AFKDLRKSLYDIKRADDEKQKRTFIQRIDILDHLGRTPNFMLRPPKEHL 360

Query: 361 VEKYFHPDNMSSAEKMKIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDK 420
           VEKYFHPDNMSSAEK+KIELAKVR++FKMSESDCGSARVQVAQLTTKI HL++VLHKKDK
Sbjct: 361 VEKYFHPDNMSSAEKLKIELAKVRDEFKMSESDCGSARVQVAQLTTKIKHLSSVLHKKDK 420

Query: 421 HSKKGLLGMVQQRKKLLKYLRRTDWDSYCMILNTLGLRDNPDYK 449
           HS+KGL+ MVQ+RKKLLKYLRRTDWDSYC++L+ LGLRDNPDYK
Sbjct: 421 HSRKGLIAMVQKRKKLLKYLRRTDWDSYCLVLSKLGLRDNPDYK 448

[Close]
BLAST of Csa4G006260 vs. TrEMBL
Match: F6I1E7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0045g00630 PE=3 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 3.3e-124
Identity = 254/451 (56.32%), Postives = 331/451 (73.39%), Query Frame = 1 

Query: 17  NPSLIHLFSSNSSAPSDPNDET------ADTSTASPRSSISSYLSDVRARLKQDQQFSSS 76
           NPS IH   S+SS  +D ++ T      + +S++S  SS+SSY +DV+A LKQ       
Sbjct: 16  NPSFIHRVFSSSSTSNDADNNTPSPPSSSSSSSSSSSSSLSSYFNDVKASLKQP------ 75

Query: 77  PSARRPADSFTSPFNRSTSP--ASKAASLEEIRKNLSEFRNRSSVPPPSDLGSTPSSSSS 136
           P   R + S  S  + S+SP  +SK ASLEEIRKNLSEFR+RSSVP PS     PS  SS
Sbjct: 76  PQPPRKSSSLFSSSSPSSSPPLSSKIASLEEIRKNLSEFRSRSSVPNPS-----PSQQSS 135

Query: 137 WQRGISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSIKESLRKV---SSARGMQS 196
               ISFQ+LYK N + K EDS              + FD+I+ESL+++   SSA G Q+
Sbjct: 136 SSSPISFQELYKRNVIPKPEDSPKGK----------LSFDAIRESLKQLRPSSSAEGGQT 195

Query: 197 ELKSGDSLSLSAFKDSLKLKPSDP-------VMGGTE-RLPVSVFGKEMKEKKDGKNVGL 256
           + K+ D LSLSAF+DSL+L+P D        V+GG++  LP+SVFGK+++++K+ ++  +
Sbjct: 196 KGKT-DVLSLSAFQDSLRLRPVDSGATKSSVVIGGSDDALPMSVFGKDIRDRKEAESTAM 255

Query: 257 KTEFVKMYSYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKLRTMEEKETESRIGGISF 316
           KT FVK Y  +ELG KLR LRP+    ++ FSL ELN+RL+KLR MEEKETES I G+SF
Sbjct: 256 KTSFVKWYGPEELGKKLRELRPETG-AESCFSLKELNERLMKLREMEEKETESSIPGVSF 315

Query: 317 QDLRASLMQMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPPNEHLVEKYFHPDNMSSA 376
           +DLR SL++++++DDE+ KK+++QRLDI+G+L  TP++ML PP EHLVE+YFHPDNMSSA
Sbjct: 316 KDLRESLVRLRMADDEKTKKSSIQRLDILGRLGGTPSFMLAPPKEHLVEQYFHPDNMSSA 375

Query: 377 EKMKIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGLLGMVQQR 436
           EK+K+EL KVR++FKMSESDCGSARVQVAQLTTKI HL + LHKKDKHS+KGL  MVQ+R
Sbjct: 376 EKLKVELKKVRDEFKMSESDCGSARVQVAQLTTKIKHLNSALHKKDKHSRKGLQAMVQRR 435

Query: 437 KKLLKYLRRTDWDSYCMILNTLGLRDNPDYK 449
           KKLLKYLRRTDWDSYC++L+ LGLRDNP+YK
Sbjct: 436 KKLLKYLRRTDWDSYCLVLSKLGLRDNPNYK 443

[Close]
BLAST of Csa4G006260 vs. TrEMBL
Match: B9H0A4_POPTR (Ribosomal protein S15 OS=Populus trichocarpa GN=POPTR_0003s17720g PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.9e-119
Identity = 253/475 (53.26%), Postives = 325/475 (68.42%), Query Frame = 1 

Query: 1   MALQLTFKPKTPKTLTNPSLIHLFSSNSSAPSDP----------NDETADTSTASPRSSI 60
           MAL L+ +P+  ++L+NP LIHLFSS+S+ PSD             +         +SS+
Sbjct: 1   MALSLS-RPRH-RSLSNPYLIHLFSSSSTTPSDDPSVSEPQQQQQQQQQQQQQQQQKSSL 60

Query: 61  SSYLSDVRARLKQD--QQFSSSPSARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFR 120
           SSY +DV+A LKQ   +   +SP   +P+ S    F++   P S  AS +EIRKNLSEFR
Sbjct: 61  SSYFNDVKASLKQQNPENRPNSPPLSKPSYSTNQSFSK---PTSNIASFDEIRKNLSEFR 120

Query: 121 NRSSVPPPSDLGSTPSSSSSWQRGISFQDLYKNNSMRKG------EDSNDAPANSTGGGR 180
            RSS PPP +  S PS   S ++ ISFQ+LYK N + +         S    AN    GR
Sbjct: 121 LRSSDPPPREPNSAPSQEPSSKQQISFQELYKRNVLARSTGGSGTTQSGGINANQPISGR 180

Query: 181 IGMPFDSIKESLRKVSSARGMQSELKSGDSLSLSAFKDSLKLKPSD--------PVMGGT 240
             + FD+I+ESLR++    G  +   +G          S KLKP +         ++GGT
Sbjct: 181 --LTFDAIRESLRQMKGG-GDNNNTAAGRGRVGELSFSSFKLKPGNENEPMNKSTIIGGT 240

Query: 241 ERLPVSVFGKEMKEKKDGKNVGLKTEFVKMYSYDELGNKLRNLRPDKEKG-KNWFSLTEL 300
           E LP +VFG+EM E + G    + TEFVKMYS+ ELG+KLR LRP  ++G K WF+L EL
Sbjct: 241 EGLPSAVFGREM-EGEGGAKGEMSTEFVKMYSHGELGDKLRILRPKVKRGEKGWFTLKEL 300

Query: 301 NDRLVKLRTMEEKETESRIGGISFQDLRASLMQMKISDDEREKKATLQRLDIMGQLVRTP 360
           N+RL KLR MEEKETESRI G+SF+DLR SL+++K S DE+  K ++QRL++MGQL R  
Sbjct: 301 NERLRKLREMEEKETESRISGVSFRDLRESLVKLKASSDEKAIKNSVQRLNLMGQL-RAS 360

Query: 361 NYMLEPPNEHLVEKYFHPDNMSSAEKMKIELAKVREKFKMSESDCGSARVQVAQLTTKIN 420
           N  L+PP +HLVEKYFHPDNMSS+EKMKIELA+VR++FKMSESDCGSARVQVA LTTKI 
Sbjct: 361 NVTLQPPKKHLVEKYFHPDNMSSSEKMKIELARVRDEFKMSESDCGSARVQVALLTTKIK 420

Query: 421 HLTAVLHKKDKHSKKGLLGMVQQRKKLLKYLRRTDWDSYCMILNTLGLRDNPDYK 449
           HL++VL+KKDKHS+KGL+GMVQ+RKKLLKYLRRTDWDSYC++L+ LGLRDNPD+K
Sbjct: 421 HLSSVLNKKDKHSRKGLIGMVQKRKKLLKYLRRTDWDSYCLVLSKLGLRDNPDHK 465

[Close]
BLAST of Csa4G006260 vs. TAIR10
Match: AT1G80620.1 (AT1G80620.1 S15/NS1, RNA-binding protein)

HSP 1 Score: 350.1 bits (897), Expect = 2.0e-96
Identity = 218/459 (47.49%), Postives = 284/459 (61.87%), Query Frame = 1 

Query: 1   MALQLTFKPKTPKTLTNPSLIHLFS----SNSSAPSDPNDETADTSTASPRSSISSYLSD 60
           MAL L  +PK  +  +NPSLIHLFS    S+SS+P D N+     S +S    ISSY S 
Sbjct: 1   MALHLA-RPKQ-RLHSNPSLIHLFSTSSSSSSSSPQDGNESNEQPSQSSSDYKISSYFSG 60

Query: 61  VRARLKQDQQFSSSPSARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFRNRSSVPPP 120
           +R+ LKQ Q    S   +R    F +       P +  +  ++IR+NL+EFR+R++ PPP
Sbjct: 61  IRSSLKQTQ----SQDGKRQFVRFDA------KPQNSLSGNQDIRRNLNEFRSRATAPPP 120

Query: 121 SDLGSTPSSSSSWQRGISFQDLYKNNSMRKGEDSNDAPANSTGGGRI-GMPFDSIKESLR 180
            D+                QDL+K N + K          S G  RI G+P  +IK +LR
Sbjct: 121 RDM----------------QDLFKQNVLSK----------SGGTRRIEGVPLTNIKANLR 180

Query: 181 KV----SSARGMQSELKSGDSLSLSAFKDSLKLKPSDPVMGGTERLPVSVFGKEMKEKKD 240
           ++    ++     + L    ++  +   D+++   S+ + G  E LP SV GKE++E+ D
Sbjct: 181 QMRPQQATTESKWANLSGIQNIMKTNINDNIR---SNVIGGAAEGLPHSVVGKELEEE-D 240

Query: 241 GKNVGLKTEFVKMYSYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKLRTMEEKETE-S 300
                +K+EF+K Y   ELG KLR  RP+ +K + WFSL ELN RLVKLR MEE++ + +
Sbjct: 241 VTEEEMKSEFIKSYDPIELGEKLRLYRPEGKKEEGWFSLQELNQRLVKLRAMEEEQFQKT 300

Query: 301 RIGGISF-QDLRASLMQMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPPNEHLVEKYF 360
            I   SF  +LR+   +      + +K    Q  +I G L  TP YMLEPP + LVE YF
Sbjct: 301 SIVHPSFVNNLRSEFHKFT----KAQKSDPFQNTNIWGVLSGTPKYMLEPPKDQLVETYF 360

Query: 361 HPDNMSSAEKMKIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKG 420
           HPDNMSSAEKMKIELAKVRE+FKMSESDCGSARVQVAQLTTKI HL++VLHKKDKHS+KG
Sbjct: 361 HPDNMSSAEKMKIELAKVREEFKMSESDCGSARVQVAQLTTKIKHLSSVLHKKDKHSRKG 413

Query: 421 LLGMVQQRKKLLKYLRRTDWDSYCMILNTLGLRDNPDYK 449
           L+ MVQ+RKKLLKY+RRTDWDSYC+ L+ LGLRDNPDYK
Sbjct: 421 LIAMVQRRKKLLKYMRRTDWDSYCLSLSKLGLRDNPDYK 413

[Close]
BLAST of Csa4G006260 vs. TAIR10
Match: AT1G15810.1 (AT1G15810.1 S15/NS1, RNA-binding protein)

HSP 1 Score: 322.8 bits (826), Expect = 3.4e-88
Identity = 200/443 (45.15%), Postives = 259/443 (58.47%), Query Frame = 1 

Query: 16  TNPSLIHLFSSNSSAPSDPNDETADT-----STASPRSSISSYLSDVRARLKQDQQFSSS 75
           +N SLI  FS NSS+ S P    A       S +SP  S SS + D++  LK   Q    
Sbjct: 14  SNTSLIRFFS-NSSSDSPPQFTNAPVEKPSQSPSSPSPSDSSPIFDIKNTLKLKLQNQQE 73

Query: 76  PSARRPADSFTSPFNRSTSPASKAASL---EEIRKNLSEFRNRSSVPPPSDLGSTPSSSS 135
              +        PF+RS + +    S    + + KNL++F+ RS+VPPP D G     S 
Sbjct: 74  QGRK--------PFDRSDAQSQNRGSTSFSQNLGKNLAKFQRRSTVPPPRDSGGVQPPSY 133

Query: 136 SWQRGISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSIKESLRKVSSARGMQSEL 195
                IS   LYK ++     D  ++ A        G   +++ E+L+ + +     + +
Sbjct: 134 -----ISLAGLYKQSAATNSSDPRNSKAQ-------GFNSNTVSETLKNLRTQINTSNNM 193

Query: 196 KSGDSLSLSAFKDSLKLKPSDPVMGGTERLPVSVFGKEMKEKK--DGKNVGLKTEFVKMY 255
                + L +FK ++            E LP  +F  +M E K  +G+     TEF+  Y
Sbjct: 194 GKRGGV-LGSFKSTVG-----------EALPKYLFETQMDESKGSEGETEEAMTEFLMFY 253

Query: 256 SYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKLRTMEEKETESRIGGISFQDLRASLM 315
           + +ELG KLR LRP+ EK + WFSL ELN RLVKLR +EEKE + R    +F  LR  + 
Sbjct: 254 NEEELGEKLRTLRPEGEKKEGWFSLEELNQRLVKLRQVEEKEAQYRTK--NFAQLRNVIS 313

Query: 316 QMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPPNEHLVEKYFHPDNMSSAEKMKIELA 375
             K   +E  + ++ Q + IMG L   P Y L PP E LV+ YFHPDNMSSAEKMKIEL+
Sbjct: 314 SFK---NENSEASSQQNVAIMGHLGGIPEYKLLPPKEDLVDTYFHPDNMSSAEKMKIELS 373

Query: 376 KVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGLLGMVQQRKKLLKYLR 435
           KVRE+FKMSESDCGSARVQVAQLTTKI HL++ LHKKDKHS+KGLLGMVQ+RKKLLKYLR
Sbjct: 374 KVREEFKMSESDCGSARVQVAQLTTKIKHLSSSLHKKDKHSRKGLLGMVQKRKKLLKYLR 418

Query: 436 RTDWDSYCMILNTLGLRDNPDYK 449
           RTDWDSYC++L+ L LRDNPDYK
Sbjct: 434 RTDWDSYCLVLSKLSLRDNPDYK 418

[Close]
BLAST of Csa4G006260 vs. NCBI nr
Match: gi|449468960|ref|XP_004152189.1| (PREDICTED: uncharacterized protein LOC101212028 [Cucumis sativus])

HSP 1 Score: 885.6 bits (2287), Expect = 3.7e-254
Identity = 449/449 (100.00%), Postives = 449/449 (100.00%), Query Frame = 1 

Query: 1   MALQLTFKPKTPKTLTNPSLIHLFSSNSSAPSDPNDETADTSTASPRSSISSYLSDVRAR 60
           MALQLTFKPKTPKTLTNPSLIHLFSSNSSAPSDPNDETADTSTASPRSSISSYLSDVRAR
Sbjct: 1   MALQLTFKPKTPKTLTNPSLIHLFSSNSSAPSDPNDETADTSTASPRSSISSYLSDVRAR 60

Query: 61  LKQDQQFSSSPSARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFRNRSSVPPPSDLG 120
           LKQDQQFSSSPSARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFRNRSSVPPPSDLG
Sbjct: 61  LKQDQQFSSSPSARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFRNRSSVPPPSDLG 120

Query: 121 STPSSSSSWQRGISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSIKESLRKVSSA 180
           STPSSSSSWQRGISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSIKESLRKVSSA
Sbjct: 121 STPSSSSSWQRGISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSIKESLRKVSSA 180

Query: 181 RGMQSELKSGDSLSLSAFKDSLKLKPSDPVMGGTERLPVSVFGKEMKEKKDGKNVGLKTE 240
           RGMQSELKSGDSLSLSAFKDSLKLKPSDPVMGGTERLPVSVFGKEMKEKKDGKNVGLKTE
Sbjct: 181 RGMQSELKSGDSLSLSAFKDSLKLKPSDPVMGGTERLPVSVFGKEMKEKKDGKNVGLKTE 240

Query: 241 FVKMYSYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKLRTMEEKETESRIGGISFQDL 300
           FVKMYSYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKLRTMEEKETESRIGGISFQDL
Sbjct: 241 FVKMYSYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKLRTMEEKETESRIGGISFQDL 300

Query: 301 RASLMQMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPPNEHLVEKYFHPDNMSSAEKM 360
           RASLMQMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPPNEHLVEKYFHPDNMSSAEKM
Sbjct: 301 RASLMQMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPPNEHLVEKYFHPDNMSSAEKM 360

Query: 361 KIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGLLGMVQQRKKL 420
           KIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGLLGMVQQRKKL
Sbjct: 361 KIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGLLGMVQQRKKL 420

Query: 421 LKYLRRTDWDSYCMILNTLGLRDNPDYKA 450
           LKYLRRTDWDSYCMILNTLGLRDNPDYKA
Sbjct: 421 LKYLRRTDWDSYCMILNTLGLRDNPDYKA 449

[Close]
BLAST of Csa4G006260 vs. NCBI nr
Match: gi|659108441|ref|XP_008454200.1| (PREDICTED: uncharacterized protein LOC103494679 [Cucumis melo])

HSP 1 Score: 830.1 bits (2143), Expect = 1.9e-237
Identity = 420/449 (93.54%), Postives = 433/449 (96.44%), Query Frame = 1 

Query: 1   MALQLTFKPKTPKTLTNPSLIHLFSSNSSAPSDPNDETADTSTASPRSSISSYLSDVRAR 60
           MALQLTFKPK PKTLTNPSLIHLFSSNSSAPSDPNDETADTSTASPRSSISSYLSDVRAR
Sbjct: 1   MALQLTFKPKNPKTLTNPSLIHLFSSNSSAPSDPNDETADTSTASPRSSISSYLSDVRAR 60

Query: 61  LKQDQQFSSSPSARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFRNRSSVPPPSDLG 120
           LKQDQQFSSSP+ARRPAD FTSP NRSTSPASKAASLEEIRKNLSEFR+RSSVPPPSD  
Sbjct: 61  LKQDQQFSSSPTARRPADQFTSPLNRSTSPASKAASLEEIRKNLSEFRSRSSVPPPSDHS 120

Query: 121 STPSSSSSWQRGISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSIKESLRKVSSA 180
           STPSSSSSWQRG+SFQ+LYKNNSMRKGED N APANS GGGRI MPFDSIKESLR+VSSA
Sbjct: 121 STPSSSSSWQRGVSFQELYKNNSMRKGEDGN-APANSKGGGRISMPFDSIKESLRQVSSA 180

Query: 181 RGMQSELKSGDSLSLSAFKDSLKLKPSDPVMGGTERLPVSVFGKEMKEKKDGKNVGLKTE 240
           RGMQ+ELK GDSLSLSAFKDSLKLKPSDPVMGGTERLPVSVFGKEMK++KDGKNVG+KTE
Sbjct: 181 RGMQNELKVGDSLSLSAFKDSLKLKPSDPVMGGTERLPVSVFGKEMKDRKDGKNVGMKTE 240

Query: 241 FVKMYSYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKLRTMEEKETESRIGGISFQDL 300
           FVKMYSYDELGNKLR LRPD EKGKNWFSL+ELNDRLVKLRTMEEKETESRIGGISFQDL
Sbjct: 241 FVKMYSYDELGNKLRALRPDNEKGKNWFSLSELNDRLVKLRTMEEKETESRIGGISFQDL 300

Query: 301 RASLMQMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPPNEHLVEKYFHPDNMSSAEKM 360
           RASLMQMKISDDE+ KKA+LQRLDIMGQLVRTPNYMLEPP EHLVEKYFHPDNMSSAEKM
Sbjct: 301 RASLMQMKISDDEKAKKASLQRLDIMGQLVRTPNYMLEPPKEHLVEKYFHPDNMSSAEKM 360

Query: 361 KIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGLLGMVQQRKKL 420
           KIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGLL MVQQRKKL
Sbjct: 361 KIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGLLAMVQQRKKL 420

Query: 421 LKYLRRTDWDSYCMILNTLGLRDNPDYKA 450
           LKYLRRTDWDSYCM+LN LGLRDNPDYKA
Sbjct: 421 LKYLRRTDWDSYCMVLNALGLRDNPDYKA 448

[Close]
BLAST of Csa4G006260 vs. NCBI nr
Match: gi|645245174|ref|XP_008228756.1| (PREDICTED: uncharacterized protein LOC103328141 [Prunus mume])

HSP 1 Score: 487.3 bits (1253), Expect = 3.0e-134
Identity = 267/455 (58.68%), Postives = 341/455 (74.95%), Query Frame = 1 

Query: 1   MALQLTFKPKTPKTLTNPSLIHLFSSNSSA-PSDPNDETADTSTASPRSSISSYLSDVRA 60
           M LQL  + +T   LT P L +LFS+ SS+ PSDP D T D +  S  SS+SSY SDV+A
Sbjct: 1   MTLQLRARHRT---LTKPPLTYLFSTTSSSDPSDPKDPT-DPNPQSHSSSLSSYFSDVKA 60

Query: 61  RLKQDQQFSSSPSARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFRNRSSVPPPSDL 120
            LKQ QQ       RRP        N S S  S AASLEEIRKNLSEFR RS+VP P+D 
Sbjct: 61  SLKQQQQQQQPQQQRRPITQ-----NPSFSRTSGAASLEEIRKNLSEFRRRSAVPEPTDS 120

Query: 121 GSTPSSSSSWQRG----ISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSIKESLR 180
            S PS  SS  +G    IS ++LY+ N + K ED N     +  GG++   FD+I+ESL+
Sbjct: 121 HSAPSQQSSTAQGSTQQISLEELYQRNVLGKSEDPN-----ADKGGKLS--FDAIRESLK 180

Query: 181 KVSSARGMQSELKSGDSLSLSAFKDSLKLKPSDPVMGGTERLPVSVFGKEM---KEKKDG 240
           K+ S   +QS+ KS D +SLSAF +SLKLKP+  V+GGT+ LP+S+FGKE    + +++G
Sbjct: 181 KIKSNTNVQSDRKSMDPMSLSAFTNSLKLKPN--VIGGTDTLPMSIFGKEKIKGRNEEEG 240

Query: 241 KNVGLKTEFVKMYSYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKLRTMEEKETESRI 300
            N  +KT+FVK+Y + ELG KLR+LRP+  KG +WFSL ELN+RL+KLR MEEKE ++ +
Sbjct: 241 SNA-MKTDFVKLYDHAELGEKLRSLRPEA-KGDSWFSLKELNERLMKLREMEEKENQAAM 300

Query: 301 GGISFQDLRASLMQMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPPNEHLVEKYFHPD 360
            G+SF+DLR SL+++KISD+E+ KK ++QRLDI+GQ  RTP++ML+PP E+LVEKYFHPD
Sbjct: 301 SGVSFRDLRDSLVKLKISDEEKVKKTSIQRLDILGQFGRTPSFMLQPPKEYLVEKYFHPD 360

Query: 361 NMSSAEKMKIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGLLG 420
           NMSSAEK+KIELAKVRE+FKMSESDCGSARVQVAQLTTKI HL++VLHKKDKHS+KGL  
Sbjct: 361 NMSSAEKLKIELAKVREEFKMSESDCGSARVQVAQLTTKIKHLSSVLHKKDKHSRKGLQA 420

Query: 421 MVQQRKKLLKYLRRTDWDSYCMILNTLGLRDNPDY 448
           M+Q+RK+LLKYLR+TDWDSYC +L+ LGLRD P++
Sbjct: 421 MLQRRKRLLKYLRKTDWDSYCFVLSKLGLRDKPEF 435

[Close]
BLAST of Csa4G006260 vs. NCBI nr
Match: gi|595966930|ref|XP_007217232.1| (hypothetical protein PRUPE_ppa005542mg [Prunus persica])

HSP 1 Score: 486.1 bits (1250), Expect = 6.6e-134
Identity = 265/457 (57.99%), Postives = 340/457 (74.40%), Query Frame = 1 

Query: 1   MALQLTFKPKTPKTLTNPSLIHLFSSNSSA-PSDPND--ETADTSTASPRSSISSYLSDV 60
           M LQL  + +T   LT P L HLFS+ +S+ PSDP D  +  D +  S  SS++SY SDV
Sbjct: 1   MTLQLRARHRT---LTKPPLTHLFSTTTSSDPSDPKDPKDPTDPNPQSHSSSLTSYFSDV 60

Query: 61  RARLKQDQQFSSSPSARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFRNRSSVPPPS 120
           +A LKQ QQ       RRP     S  N   S  S AASLEEIRKNLSEFR RS+VP P+
Sbjct: 61  KASLKQQQQ--QPQQQRRPISQNPSFSNHPLSRTSGAASLEEIRKNLSEFRRRSAVPEPT 120

Query: 121 DLGSTPSSSSSWQRG----ISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSIKES 180
           D  S PS  SS  +G    +SFQ+LY  N + K ED N     +  GG++   F++I+ES
Sbjct: 121 DSNSAPSQQSSTAQGSTQQVSFQELYNRNVLGKSEDPN-----ADKGGKLS--FNAIRES 180

Query: 181 LRKVSSARGMQSELKSGDSLSLSAFKDSLKLKPSDPVMGGTERLPVSVFGKEM---KEKK 240
           L+K+ S   +QS+ KS D +SLSAF +SLKLKP+  V+GGT+ LP+S+FGKE    + ++
Sbjct: 181 LKKIKSNTNVQSDRKSVDPMSLSAFTNSLKLKPN--VIGGTDTLPMSIFGKEKIKGRNEE 240

Query: 241 DGKNVGLKTEFVKMYSYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKLRTMEEKETES 300
           +G +  +KT+FVK+Y + ELG KLR LRP+  KG +WFSL ELN+RL+KLR MEE ET++
Sbjct: 241 EG-SYAMKTDFVKLYDHAELGEKLRRLRPEA-KGDSWFSLKELNERLMKLREMEEMETQA 300

Query: 301 RIGGISFQDLRASLMQMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPPNEHLVEKYFH 360
            + G+SF+DLR SL+++KISD+E+ KK ++QRLDI+GQ  RTP++ML+PP EHLVEKYFH
Sbjct: 301 AMSGVSFRDLRDSLVKLKISDEEKVKKTSIQRLDILGQFGRTPSFMLQPPKEHLVEKYFH 360

Query: 361 PDNMSSAEKMKIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGL 420
           PDNMSSAEK+KIELAKVRE+FKMSESDCGSARVQVAQLTTKI HL++VLHKKDKHS+KGL
Sbjct: 361 PDNMSSAEKLKIELAKVREEFKMSESDCGSARVQVAQLTTKIKHLSSVLHKKDKHSRKGL 420

Query: 421 LGMVQQRKKLLKYLRRTDWDSYCMILNTLGLRDNPDY 448
             M+Q+RK+LLKYLR+TDWDSYC +L+ LGLRD P++
Sbjct: 421 QAMLQRRKRLLKYLRKTDWDSYCFVLSKLGLRDKPEF 441

[Close]
BLAST of Csa4G006260 vs. NCBI nr
Match: gi|658009898|ref|XP_008340175.1| (PREDICTED: probable 37S ribosomal protein S28, mitochondrial isoform X2 [Malus domestica])

HSP 1 Score: 478.8 bits (1231), Expect = 1.1e-131
Identity = 269/467 (57.60%), Postives = 343/467 (73.45%), Query Frame = 1 

Query: 1   MALQLTFKPKTPKTLTNPSLIHLF---SSNSSAPSDPND-----ETADTSTASPRSSISS 60
           MALQL  + +    LTNPSL HLF   SS+SS PSDP D     E  D +  S  SS+SS
Sbjct: 1   MALQLRSRHRN---LTNPSLTHLFCTKSSSSSDPSDPKDPSDPKEPTDPNPQSHSSSLSS 60

Query: 61  YLSDVRARLKQDQQFSSSP----SARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFR 120
           Y SDV+A L+Q QQ    P      RRP     S  N S S  SK ASLEEIRKNLSE+R
Sbjct: 61  YFSDVKASLRQHQQQQQPPPPPPEQRRPTPQNPSYPNPSPSRTSKVASLEEIRKNLSEYR 120

Query: 121 NRSSVPPPSDLGSTPSSSSSWQRG----ISFQDLYKNNSMRKGEDSNDAPANSTGGGRIG 180
            R+SVP P++ G   S  SS   G    ISFQ+LYK N + K E  N   ANS       
Sbjct: 121 RRTSVPDPTESGPAASQHSSTAPGFPQHISFQELYKRNVLGKAEGGN---ANSDRK---- 180

Query: 181 MPFDSIKESLRKVSSARGMQSELKSGDSLSLSAFKDSLKLKPSDP-VMGGTER-LPVSVF 240
           + FD+I+ESLRK+ +   +Q++ K  D LSLS + +SL+L+P+ P V+GGT   LP S+F
Sbjct: 181 LSFDTIRESLRKIKNP-SVQNDRK--DPLSLSRYTESLRLEPNQPNVIGGTGTPLPSSIF 240

Query: 241 GKEMKEKKDGKN--VGLKTEFVKMYSYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKL 300
           GKE++++K+ ++  + +KT FVKMYSY ELG KLR LRPD EKG+NWFSL ELN+RL+KL
Sbjct: 241 GKELRKEKNAEDGSIEMKTNFVKMYSYAELGEKLRKLRPD-EKGQNWFSLEELNERLMKL 300

Query: 301 RTMEEKETESRIGGISFQDLRASLMQMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPP 360
           R MEEKET++ IG ++F+DLR SL++++++D E+ KK+++QR+D++  + RTPN+ML+PP
Sbjct: 301 REMEEKETQAAIGNLTFRDLRESLVKLQMTDQEKAKKSSIQRIDVLSHIGRTPNFMLQPP 360

Query: 361 NEHLVEKYFHPDNMSSAEKMKIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLH 420
            E+LVEKYFHPDNMSSAEK+K+ELAKVR++FKMSESDCGSARVQVAQLTTKI HL++VLH
Sbjct: 361 KENLVEKYFHPDNMSSAEKLKLELAKVRDEFKMSESDCGSARVQVAQLTTKIKHLSSVLH 420

Query: 421 KKDKHSKKGLLGMVQQRKKLLKYLRRTDWDSYCMILNTLGLRDNPDY 448
           KKDKHS KGL  MVQQRK+LLKYLRRTDWDSYC++L+ LGLRD P++
Sbjct: 421 KKDKHSLKGLQAMVQQRKRLLKYLRRTDWDSYCLVLSKLGLRDKPEF 453

The following BLAST results are available for this feature:
BLAST of Csa4G006260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RS15_HELMI1.2e-1356.0030S ribosomal protein S15 OS=Heliobacterium modesticaldum (strain ATCC 51547 / I... [more]
RS15_KLEP31.5e-1352.5030S ribosomal protein S15 OS=Klebsiella pneumoniae (strain 342) GN=rpsO PE=3 SV=... [more]
RS15_KLEP72.0e-1352.5030S ribosomal protein S15 OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATC... [more]
RS15_DICT62.0e-1348.8130S ribosomal protein S15 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM ... [more]
RS15_PSELT2.0e-1350.0030S ribosomal protein S15 OS=Pseudothermotoga lettingae (strain ATCC BAA-301 / D... [more]
BLAST of Csa4G006260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVK2_CUCSA2.6e-254100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006260 PE=3 SV=1[more]
M5WYW8_PRUPE4.6e-13457.99Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005542mg PE=3 SV=1[more]
A0A061G9Z2_THECC1.4e-13056.90Structural constituent of ribosome, putative OS=Theobroma cacao GN=TCM_027358 PE... [more]
F6I1E7_VITVI3.3e-12456.32Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0045g00630 PE=3 SV=... [more]
B9H0A4_POPTR1.9e-11953.26Ribosomal protein S15 OS=Populus trichocarpa GN=POPTR_0003s17720g PE=3 SV=1[more]
BLAST of Csa4G006260 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80620.12.0e-9647.49 S15/NS1, RNA-binding protein[more]
AT1G15810.13.4e-8845.15 S15/NS1, RNA-binding protein[more]
BLAST of Csa4G006260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449468960|ref|XP_004152189.1|3.7e-254100.00PREDICTED: uncharacterized protein LOC101212028 [Cucumis sativus][more]
gi|659108441|ref|XP_008454200.1|1.9e-23793.54PREDICTED: uncharacterized protein LOC103494679 [Cucumis melo][more]
gi|645245174|ref|XP_008228756.1|3.0e-13458.68PREDICTED: uncharacterized protein LOC103328141 [Prunus mume][more]
gi|595966930|ref|XP_007217232.1|6.6e-13457.99hypothetical protein PRUPE_ppa005542mg [Prunus persica][more]
gi|658009898|ref|XP_008340175.1|1.1e-13157.60PREDICTED: probable 37S ribosomal protein S28, mitochondrial isoform X2 [Malus d... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000589Ribosomal_S15
IPR005290Ribosomal_S15_bac-type
IPR009068S15_NS1_RNA-bd
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009099 valine biosynthetic process
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
cellular_component GO:0009507 chloroplast
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003862 3-isopropylmalate dehydrogenase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0051287 NAD binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU097942cucumber EST collection version 3.0transcribed_cluster
CU101803cucumber EST collection version 3.0transcribed_cluster
CU126146cucumber EST collection version 3.0transcribed_cluster
CU138040cucumber EST collection version 3.0transcribed_cluster
CU153357cucumber EST collection version 3.0transcribed_cluster
CU153764cucumber EST collection version 3.0transcribed_cluster
CU167565cucumber EST collection version 3.0transcribed_cluster
CU167691cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G006260.1Csa4G006260.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU153764CU153764transcribed_cluster
CU167565CU167565transcribed_cluster
CU101803CU101803transcribed_cluster
CU167691CU167691transcribed_cluster
CU138040CU138040transcribed_cluster
CU097942CU097942transcribed_cluster
CU153357CU153357transcribed_cluster
CU126146CU126146transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000589Ribosomal protein S15PFAMPF00312Ribosomal_S15coord: 366..442
score: 8.9
IPR000589Ribosomal protein S15SMARTSM01387Ribosomal_S15_2coord: 364..442
score: 1.9
IPR005290Ribosomal protein S15, bacterial-typeHAMAPMF_01343_BRibosomal_S15_Bcoord: 354..443
score: 15
IPR005290Ribosomal protein S15, bacterial-typeTIGRFAMsTIGR00952TIGR00952coord: 363..442
score: 4.0
IPR009068S15/NS1, RNA-bindingGENE3DG3DSA:1.10.287.10coord: 361..443
score: 2.8
IPR009068S15/NS1, RNA-bindingunknownSSF47060S15/NS1 RNA-binding domaincoord: 363..443
score: 1.65
NoneNo IPR availablePRODOMPD157043coord: 366..442
score: 7.0
NoneNo IPR availablePANTHERPTHR23321RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLARcoord: 212..449
score: 1.4E
NoneNo IPR availablePANTHERPTHR23321:SF2628S RIBOSOMAL PROTEIN S15, MITOCHONDRIALcoord: 212..449
score: 1.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa4G006260Cla012733Watermelon (97103) v1cuwmB304
Csa4G006260MELO3C017854Melon (DHL92) v3.5.1cumeB312
Csa4G006260ClCG07G012350Watermelon (Charleston Gray)cuwcgB326
Csa4G006260Lsi07G004330Bottle gourd (USVL1VR-Ls)culsiB312
Csa4G006260MELO3C017854.2Melon (DHL92) v3.6.1cumedB297
Csa4G006260Cla97C07G139130Watermelon (97103) v2cuwmbB323
Csa4G006260Bhi01G002788Wax gourdcuwgoB366
Csa4G006260CSPI04G01820Wild cucumber (PI 183967)cpicuB182
Csa4G006260Cucsa.096170Cucumber (Gy14) v1cgycuB102
Csa4G006260CmaCh01G001660Cucurbita maxima (Rimu)cmacuB477
Csa4G006260CmoCh01G001740Cucurbita moschata (Rifu)cmocuB466
Csa4G006260Cp4.1LG02g15130Cucurbita pepo (Zucchini)cpecuB568
Csa4G006260CsGy4G001740Cucumber (Gy14) v2cgybcuB165
Csa4G006260Carg04210Silver-seed gourdcarcuB0225
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G006260Watermelon (97103) v2cuwmbB330
Csa4G006260Cucumber (Gy14) v1cgycuB124
Csa4G006260Cucurbita maxima (Rimu)cmacuB260
Csa4G006260Cucurbita maxima (Rimu)cmacuB466
Csa4G006260Cucurbita moschata (Rifu)cmocuB245
Csa4G006260Cucurbita moschata (Rifu)cmocuB456
Csa4G006260Melon (DHL92) v3.5.1cumeB285
Csa4G006260Watermelon (Charleston Gray)cuwcgB267
Csa4G006260Cucurbita pepo (Zucchini)cpecuB575
Csa4G006260Cucurbita pepo (Zucchini)cpecuB615
Csa4G006260Cucurbita pepo (Zucchini)cpecuB620
Csa4G006260Bottle gourd (USVL1VR-Ls)culsiB268
Csa4G006260Cucumber (Gy14) v2cgybcuB317
Csa4G006260Melon (DHL92) v3.6.1cumedB269
Csa4G006260Silver-seed gourdcarcuB0128
Csa4G006260Silver-seed gourdcarcuB0226