Csa3G895870 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G895870
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	VQ motif family protein expressed; contains IPR008889 (VQ)
Location	Chr3 : 38675299 .. 38676094 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCGGTAGCGGAAGTTTGCAATCTTCTAGTGGTGGTGATGAAGAATATGATTCTCATCATCATCAACAACCTCAACTAGTTTTTCCTCCATCCCCACTTTTCTTCAATCTTCCTTCTTCTTCTTCTTCTTCTTCTTGTTCTTCTTCATCTCTTCTTGCTTCTTCTTCTTCTTCTTCAATTCCTCATCATCAACAATCACTTCCTAGTTTTCATAATTACCAAAATAATCATCACCTCCTCCCTTCTTTCTATGATTTTCCAGCTTCCTCTAATTACAATTTCAACCCTGATTCTTCTTCCAATTCCTTTGTTAATCTCGACGTCTTAAGATCTGGAGAACCCACCCATTTCAAAACTCCCCCCGACGGATCTACCCAAAACCAAATCCCAACGATTCGTTCAACCCCATCAACGTCTTCCGGCGCTTTACATCCTAAAGTCAATACTAAGAAACGAACTAGAGCTTCACGTCGAGCCCCCACCACCGTTCTCACAACAGACACTACGAATTTCAGAGCAATGGTACAAGAGTTCACTGGAATCCCTTCCCCGCCTTTTACTTCCGGTGGGTCATCCTATTCCCGGCGATTTGATCTGTTTGGGTTGGTTCGAACAACAAGTAATAACTCCACAGCTACGCGTTTAGAAGATTCTGGATTGGGAGTGGGTTCTTACCCTTCTCGATCAAAGGACGACAATGTTGGTGTTGGTGGGGTTTTTTCATTTCAATCGGTATCTTCAGGGCATGATTTTAATTCTAATATTTCCAAGCAAGTTAGAGAGAATTTAG

mRNA sequence

ATGGATTCCGGTAGCGGAAGTTTGCAATCTTCTAGTGGTGGTGATGAAGAATATGATTCTCATCATCATCAACAACCTCAACTAGTTTTTCCTCCATCCCCACTTTTCTTCAATCTTCCTTCTTCTTCTTCTTCTTCTTCTTGTTCTTCTTCATCTCTTCTTGCTTCTTCTTCTTCTTCTTCAATTCCTCATCATCAACAATCACTTCCTAGTTTTCATAATTACCAAAATAATCATCACCTCCTCCCTTCTTTCTATGATTTTCCAGCTTCCTCTAATTACAATTTCAACCCTGATTCTTCTTCCAATTCCTTTGTTAATCTCGACGTCTTAAGATCTGGAGAACCCACCCATTTCAAAACTCCCCCCGACGGATCTACCCAAAACCAAATCCCAACGATTCGTTCAACCCCATCAACGTCTTCCGGCGCTTTACATCCTAAAGTCAATACTAAGAAACGAACTAGAGCTTCACGTCGAGCCCCCACCACCGTTCTCACAACAGACACTACGAATTTCAGAGCAATGGTACAAGAGTTCACTGGAATCCCTTCCCCGCCTTTTACTTCCGGTGGGTCATCCTATTCCCGGCGATTTGATCTGTTTGGGTTGGTTCGAACAACAAGTAATAACTCCACAGCTACGCGTTTAGAAGATTCTGGATTGGGAGTGGGTTCTTACCCTTCTCGATCAAAGGACGACAATGTTGGTGTTGGTGGGGGCATGATTTTAATTCTAATATTTCCAAGCAAGTTAGAGAGAATTTAG

Coding sequence (CDS)

ATGGATTCCGGTAGCGGAAGTTTGCAATCTTCTAGTGGTGGTGATGAAGAATATGATTCTCATCATCATCAACAACCTCAACTAGTTTTTCCTCCATCCCCACTTTTCTTCAATCTTCCTTCTTCTTCTTCTTCTTCTTCTTGTTCTTCTTCATCTCTTCTTGCTTCTTCTTCTTCTTCTTCAATTCCTCATCATCAACAATCACTTCCTAGTTTTCATAATTACCAAAATAATCATCACCTCCTCCCTTCTTTCTATGATTTTCCAGCTTCCTCTAATTACAATTTCAACCCTGATTCTTCTTCCAATTCCTTTGTTAATCTCGACGTCTTAAGATCTGGAGAACCCACCCATTTCAAAACTCCCCCCGACGGATCTACCCAAAACCAAATCCCAACGATTCGTTCAACCCCATCAACGTCTTCCGGCGCTTTACATCCTAAAGTCAATACTAAGAAACGAACTAGAGCTTCACGTCGAGCCCCCACCACCGTTCTCACAACAGACACTACGAATTTCAGAGCAATGGTACAAGAGTTCACTGGAATCCCTTCCCCGCCTTTTACTTCCGGTGGGTCATCCTATTCCCGGCGATTTGATCTGTTTGGGTTGGTTCGAACAACAAGTAATAACTCCACAGCTACGCGTTTAGAAGATTCTGGATTGGGAGTGGGTTCTTACCCTTCTCGATCAAAGGACGACAATGTTGGTGTTGGTGGGGGCATGATTTTAATTCTAATATTTCCAAGCAAGTTAGAGAGAATTTAG

Protein sequence

MDSGSGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASSSSSSIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRSGEPTHFKTPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKKRTRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGGGMILILIFPSKLERI*

Homology

[Close]

BLAST of Csa3G895870 vs. Swiss-Prot
Match: VQ22_ARATH (VQ motif-containing protein 22 OS=Arabidopsis thaliana GN=VQ22 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.4e-08
Identity = 38/85 (44.71%), Postives = 46/85 (54.12%), Query Frame = 1


Query: 117 THFKTPPDGSTQNQIPTIRSTPSTSSGALHPKVN-----TKKRTRASRRAPTTVLTTDTT 176
           T F T    ST     T   T S  S  L P+       T++R+RASRR PTT+L TDT+
Sbjct: 16  TFFTTSTTASTAVTTTTAGDTTSIDS-RLSPETGRVTKPTRRRSRASRRTPTTLLNTDTS 75

Query: 177 NFRAMVQEFTGIPSPPFTSGGSSYS 197
           NFRAMVQ++TG PS      G++ S
Sbjct: 76  NFRAMVQQYTGGPSAMAFGSGNTTS 99

[Close]

BLAST of Csa3G895870 vs. TrEMBL
Match: A0A0A0LJY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G895870 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 3.1e-143
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1


Query: 1   MDSGSGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASSSSS 60
           MDSGSGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASSSSS
Sbjct: 1   MDSGSGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASSSSS 60

Query: 61  SIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRSGEPTHFK 120
           SIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRSGEPTHFK
Sbjct: 61  SIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRSGEPTHFK 120

Query: 121 TPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKKRTRASRRAPTTVLTTDTTNFRAMVQEF 180
           TPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKKRTRASRRAPTTVLTTDTTNFRAMVQEF
Sbjct: 121 TPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKKRTRASRRAPTTVLTTDTTNFRAMVQEF 180

Query: 181 TGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGG 240
           TGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGG
Sbjct: 181 TGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGG 240

Query: 241 GMILILIFPSKLERI 256
           GMILILIFPSKLERI
Sbjct: 241 GMILILIFPSKLERI 255

[Close]

BLAST of Csa3G895870 vs. TrEMBL
Match: A0A0D2U5Z7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G042200 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.2e-27
Identity = 104/231 (45.02%), Postives = 118/231 (51.08%), Query Frame = 1


Query: 1   MDSG-SGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASSSS 60
           MDSG S SLQSSSG DEEYDS    +P+ V    P F N     S+ S    SL +    
Sbjct: 1   MDSGNSSSLQSSSGDDEEYDS----RPESV----PAFLNTSGHFSALSNPHPSLGS---- 60

Query: 61  SSIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRS-----G 120
               HHQ            HH  P+F+D   S NY  NP S S   +NLD +R       
Sbjct: 61  ----HHQ------------HHPSPTFFD--PSPNY-LNPFSQSQ-LLNLDGIRPRGSLRS 120

Query: 121 EP--THFKTPPDGSTQNQIPTIRSTPSTSSGALHPKV--------------------NTK 180
           +P  T   T P  S+ NQ   +  T   + G+                         N K
Sbjct: 121 DPNCTDLGTLPGSSSSNQSMLVSQTQELNRGSFPSSSAHGNNGVRSSKPDQPTSVAKNPK 180

Query: 181 KRTRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFG 204
           KRTRASRRAPTTVLTTDTTNFRAMVQEFTGIP+PPF SG SSYSRR DLFG
Sbjct: 181 KRTRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPF-SGSSSYSRRLDLFG 198

[Close]

BLAST of Csa3G895870 vs. TrEMBL
Match: A0A0D2SMF4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G042200 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.2e-27
Identity = 104/231 (45.02%), Postives = 118/231 (51.08%), Query Frame = 1


Query: 1   MDSG-SGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASSSS 60
           MDSG S SLQSSSG DEEYDS    +P+ V    P F N     S+ S    SL +    
Sbjct: 1   MDSGNSSSLQSSSGDDEEYDS----RPESV----PAFLNTSGHFSALSNPHPSLGS---- 60

Query: 61  SSIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRS-----G 120
               HHQ            HH  P+F+D   S NY  NP S S   +NLD +R       
Sbjct: 61  ----HHQ------------HHPSPTFFD--PSPNY-LNPFSQSQ-LLNLDGIRPRGSLRS 120

Query: 121 EP--THFKTPPDGSTQNQIPTIRSTPSTSSGALHPKV--------------------NTK 180
           +P  T   T P  S+ NQ   +  T   + G+                         N K
Sbjct: 121 DPNCTDLGTLPGSSSSNQSMLVSQTQELNRGSFPSSSAHGNNGVRSSKPDQPTSVAKNPK 180

Query: 181 KRTRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFG 204
           KRTRASRRAPTTVLTTDTTNFRAMVQEFTGIP+PPF SG SSYSRR DLFG
Sbjct: 181 KRTRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPF-SGSSSYSRRLDLFG 198

[Close]

BLAST of Csa3G895870 vs. TrEMBL
Match: A0A0A0KGS8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500500 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.0e-26
Identity = 101/231 (43.72%), Postives = 130/231 (56.28%), Query Frame = 1


Query: 1   MDSGS-GSLQSSSGGDEEYDSHH------------HQQPQLVFPPSPLFFNLPSSSSSSS 60
           MDSGS GS+QSSSGG++EYDS              H  P+   P  PL  + P SS+SS+
Sbjct: 1   MDSGSSGSIQSSSGGEDEYDSRAEGFSGFLNKPPGHVGPK-ANPSPPLTAHHPHSSTSSA 60

Query: 61  CSS--SSLLASSSSSSIPHHQQSLPS--FHNYQNNHHLLPSFYDFPASSNYNFNPDSSSN 120
                S+ L   S+ S   HQ S+P+  F   +NN    P+   FP S   +  P S+ N
Sbjct: 61  LFDPFSNFLDPLSTRS---HQNSIPNLDFLWPRNNPRSDPNPIHFPGS--ISMPPSSTPN 120

Query: 121 SFV---NLDVL-RSGEPTHFKTPPDGST-----QNQIPTIRSTPS-TSSGALHPKV-NTK 180
           S++   N  V  ++ EP      P G T      + +P   +T + T++G  +P V N +
Sbjct: 121 SYMAATNSQVPHQTTEPNVVHQAPRGLTLTTDRSDVVPNNSNTATGTTTGTSNPSVRNPR 180

Query: 181 KRTRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFG 204
           KRTRASRRAPTTVLTTDT+NFRAMVQEFTGIP+PPFT   S    R DLFG
Sbjct: 181 KRTRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPFTPASSFPRARLDLFG 225

[Close]

BLAST of Csa3G895870 vs. TrEMBL
Match: W9QN94_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022090 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 9.0e-26
Identity = 100/238 (42.02%), Postives = 125/238 (52.52%), Query Frame = 1


Query: 1   MDSG--SGSLQSSSGGDEEYDS-----------------------HHHQQPQLVFPPSPL 60
           MDSG  SGS+QSSSGGDEEYDS                       HHHQ    +F P   
Sbjct: 1   MDSGNTSGSMQSSSGGDEEYDSRAAESISALLSNNLPQNDVVHHHHHHQHQSSMFDPLSN 60

Query: 61  FFNLPSSSSSSSCSSSSLLASSSSSSIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYN 120
           FF+ P SSSSSS S +     +     P   +S P+     N+  L+      P+SS  N
Sbjct: 61  FFD-PVSSSSSSRSLNPNPFLNLDMVWPKPVRSDPN----PNSSELVSLI---PSSSQPN 120

Query: 121 FNPDSSSNSFVNLDVLRSGEPTHFKTPPDGSTQNQIPTIRSTPS---------TSSGALH 180
           F   ++S       V  +      +  P+  T++QI  + S+ S         T +G   
Sbjct: 121 FFSSNNSIQLGQTAVAGASNFPAIQIAPEIQTRSQIHRLPSSSSADRNDAVNITPNGGAA 180

Query: 181 PKVNTKKRTRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFTSGGSSYSR-RFDLFG 204
           P+ N KKR+RASRRAPTTVLTTDT+NFRAMVQEFTGIP+PPFTS  S + R R DLFG
Sbjct: 181 PR-NPKKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPFTS--SPFPRTRLDLFG 227

[Close]

BLAST of Csa3G895870 vs. TAIR10
Match: AT5G65170.1 (AT5G65170.1 VQ motif-containing protein)

HSP 1 Score: 98.6 bits (244), Expect = 5.9e-21
Identity = 78/217 (35.94%), Postives = 114/217 (52.53%), Query Frame = 1


Query: 1   MDSG-SGSLQSSSGG-----DEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLL 60
           M+SG S S+QSSSGG      EEYDS   Q        S LF +  ++++ ++ S +  +
Sbjct: 1   MESGNSSSMQSSSGGGGGGDQEEYDSRADQSI------SALFNHNNNNNNPTTVSPNIAV 60

Query: 61  ASSSSSSIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRSG 120
            +   + I ++  +     ++  ++ L  +    P   +    P  SS      + L+  
Sbjct: 61  PTQLDALIANYFNT-----SWSADNPLWSTTATQPTDGSRPVPPPISSEQVFFTNPLQQ- 120

Query: 121 EPTHFKTPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKKRTRASRRAPTTVLTTDTTNFR 180
              + +T P+ +T + I ++   P+     L    N KKR+R SRRAPTTVLTTDT+NFR
Sbjct: 121 ---NLRTVPNTNTTSPICSV---PTDKKNGLATTRNPKKRSRVSRRAPTTVLTTDTSNFR 180

Query: 181 AMVQEFTGIPSPPFTSGGSSYSR-RFDLFGLVRTTSN 211
           AMVQEFTG PS PFT   SS+ R RFDLFG   ++S+
Sbjct: 181 AMVQEFTGNPSTPFTGLSSSFPRSRFDLFGSSSSSSS 199

[Close]

BLAST of Csa3G895870 vs. TAIR10
Match: AT1G35830.1 (AT1G35830.1 VQ motif-containing protein)

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-20
Identity = 72/169 (42.60%), Postives = 89/169 (52.66%), Query Frame = 1


Query: 47  SCSSSSLLASSSSSSIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYNFNP------DS 106
           SC+S SL     SSS  H   S  +  ++ +    LP F   P+SS Y  +P       S
Sbjct: 3   SCNSGSL----QSSSDDHESSSTGAPQDHSS--FFLPPFQPPPSSSTYYGDPTTLSSSSS 62

Query: 107 SSNSFVNL-------DVLRSGEPTHFKTPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKK 166
           SS +++N        D+L     TH   P     Q   P     PS+S        N +K
Sbjct: 63  SSATYLNFVNNLISDDILNQ---THLLPP-----QPPPPPPPPPPSSSR-------NPRK 122

Query: 167 RTRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLF 203
           RTRASRRAPTTVLTTDT+NFRAMVQEFTG+P+ PF+   SS +RRFD+F
Sbjct: 123 RTRASRRAPTTVLTTDTSNFRAMVQEFTGVPASPFSHPFSSTTRRFDIF 150

[Close]

BLAST of Csa3G895870 vs. TAIR10
Match: AT4G39720.1 (AT4G39720.1 VQ motif-containing protein)

HSP 1 Score: 92.4 bits (228), Expect = 4.3e-19
Identity = 77/224 (34.38%), Postives = 100/224 (44.64%), Query Frame = 1


Query: 1   MDSG-SGSLQSSSGG----DEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLA 60
           M+SG S S+QSSSGG    +EEYDS    Q                              
Sbjct: 1   MESGNSSSMQSSSGGGGGGEEEYDSRAADQ------------------------------ 60

Query: 61  SSSSSSIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRSGE 120
            S S+   HH   + S    Q NH  L     F  ++N +  P +  N+   L V +  +
Sbjct: 61  -SISAFFDHHNNHVSSIPTPQQNHRNL---LHFDHNNNNSLIPPNYFNNNTFLPVNQQPD 120

Query: 121 PTHFKTPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKKRTRASRRAPTTVLTTDTTNFRA 180
           P         S  + +P     P+ + G +     TKKR+RASRRAPTTVLTTDT+NFRA
Sbjct: 121 PISQLDLRTSSATSSLP-----PTNNIGVIK---KTKKRSRASRRAPTTVLTTDTSNFRA 180

Query: 181 MVQEFTGIPSPPFTSGGS--SYSRRFDLFGLVRTTSNNSTATRL 218
           MVQEFTGIP+PP  +  S  + +R     GL  ++ N      L
Sbjct: 181 MVQEFTGIPAPPLFNNNSIVNTTRLNTFLGLSSSSPNTYNTNNL 182

[Close]

BLAST of Csa3G895870 vs. TAIR10
Match: AT3G22160.1 (AT3G22160.1 VQ motif-containing protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09
Identity = 38/85 (44.71%), Postives = 46/85 (54.12%), Query Frame = 1


Query: 117 THFKTPPDGSTQNQIPTIRSTPSTSSGALHPKVN-----TKKRTRASRRAPTTVLTTDTT 176
           T F T    ST     T   T S  S  L P+       T++R+RASRR PTT+L TDT+
Sbjct: 16  TFFTTSTTASTAVTTTTAGDTTSIDS-RLSPETGRVTKPTRRRSRASRRTPTTLLNTDTS 75

Query: 177 NFRAMVQEFTGIPSPPFTSGGSSYS 197
           NFRAMVQ++TG PS      G++ S
Sbjct: 76  NFRAMVQQYTGGPSAMAFGSGNTTS 99

[Close]

BLAST of Csa3G895870 vs. TAIR10
Match: AT4G15120.1 (AT4G15120.1 VQ motif-containing protein)

HSP 1 Score: 59.7 bits (143), Expect = 3.1e-09
Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 1


Query: 131 IPTIRSTPSTSSGALHPKVN-----TKKRTRASRRAPTTVLTTDTTNFRAMVQEFTGIPS 190
           + T  +T +++   L P        T++R+RASRR PTT+  TDT NFRAMVQ+FTG PS
Sbjct: 25  VTTTTTTATSADSPLSPDNRRVAKPTRRRSRASRRTPTTLFNTDTANFRAMVQQFTGGPS 84

Query: 191 PPFTSGGSSYSRRFDLFGLVRTTSNNSTA 215
               + GSS S  F L      TS++ TA
Sbjct: 85  A--VAFGSSPSSGFSL------TSSDPTA 105

[Close]

BLAST of Csa3G895870 vs. NCBI nr
Match: gi|700205208|gb|KGN60341.1| (hypothetical protein Csa_3G895870 [Cucumis sativus])

HSP 1 Score: 515.8 bits (1327), Expect = 4.4e-143
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1


Query: 1   MDSGSGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASSSSS 60
           MDSGSGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASSSSS
Sbjct: 1   MDSGSGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASSSSS 60

Query: 61  SIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRSGEPTHFK 120
           SIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRSGEPTHFK
Sbjct: 61  SIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRSGEPTHFK 120

Query: 121 TPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKKRTRASRRAPTTVLTTDTTNFRAMVQEF 180
           TPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKKRTRASRRAPTTVLTTDTTNFRAMVQEF
Sbjct: 121 TPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKKRTRASRRAPTTVLTTDTTNFRAMVQEF 180

Query: 181 TGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGG 240
           TGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGG
Sbjct: 181 TGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGG 240

Query: 241 GMILILIFPSKLERI 256
           GMILILIFPSKLERI
Sbjct: 241 GMILILIFPSKLERI 255

[Close]

BLAST of Csa3G895870 vs. NCBI nr
Match: gi|778687794|ref|XP_011652626.1| (PREDICTED: uncharacterized protein DDB_G0271670-like [Cucumis sativus])

HSP 1 Score: 488.4 bits (1256), Expect = 7.5e-135
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1


Query: 1   MDSGSGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASSSSS 60
           MDSGSGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASSSSS
Sbjct: 1   MDSGSGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASSSSS 60

Query: 61  SIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRSGEPTHFK 120
           SIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRSGEPTHFK
Sbjct: 61  SIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRSGEPTHFK 120

Query: 121 TPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKKRTRASRRAPTTVLTTDTTNFRAMVQEF 180
           TPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKKRTRASRRAPTTVLTTDTTNFRAMVQEF
Sbjct: 121 TPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKKRTRASRRAPTTVLTTDTTNFRAMVQEF 180

Query: 181 TGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGG 240
           TGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGG
Sbjct: 181 TGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGG 240

[Close]

BLAST of Csa3G895870 vs. NCBI nr
Match: gi|659132125|ref|XP_008466032.1| (PREDICTED: spindle pole body component 97-like [Cucumis melo])

HSP 1 Score: 454.5 bits (1168), Expect = 1.2e-124
Identity = 232/245 (94.69%), Postives = 234/245 (95.51%), Query Frame = 1


Query: 1   MDSGSGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSS-CSSSSLLASSSS 60
           MDSGSGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSS CSSSSLLA SSS
Sbjct: 1   MDSGSGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSSCSSSSLLACSSS 60

Query: 61  SSIPHHQQSLPSFHNYQNN----HHLLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRSGE 120
           S IPHHQQSLP+FHNYQNN    HHLLPSFYDFP SSNYNFNPDSSSNSFVNLDVLRSGE
Sbjct: 61  S-IPHHQQSLPNFHNYQNNNNHHHHLLPSFYDFP-SSNYNFNPDSSSNSFVNLDVLRSGE 120

Query: 121 PTHFKTPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKKRTRASRRAPTTVLTTDTTNFRA 180
           PTHF+ PPDGSTQNQIPT RSTPSTSSGALHPKV TKKRTRASRRAPTTVLTTDTTNFRA
Sbjct: 121 PTHFRNPPDGSTQNQIPTNRSTPSTSSGALHPKVTTKKRTRASRRAPTTVLTTDTTNFRA 180

Query: 181 MVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDN 240
           MVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDN
Sbjct: 181 MVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDN 240

[Close]

BLAST of Csa3G895870 vs. NCBI nr
Match: gi|697102703|ref|XP_009602610.1| (PREDICTED: epsin-like [Nicotiana tomentosiformis])

HSP 1 Score: 127.5 bits (319), Expect = 3.4e-26
Identity = 99/234 (42.31%), Postives = 121/234 (51.71%), Query Frame = 1


Query: 1   MDSG-SGSLQSSSGG--DEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASS 60
           MDSG SGS+QSSSGG  DEEYDSH                     S S+  +SS+   S 
Sbjct: 1   MDSGNSGSVQSSSGGGGDEEYDSH-------------------GGSISTFLNSSAHFGSI 60

Query: 61  SSSSIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYN--------FNPDSSSNSFVNLD 120
           SS+ +P      P+  +  ++ +   +F D  A+S YN           D++ N+F NL+
Sbjct: 61  SSNPLPQFLSHQPTLFDPHDSQNFNSNFQD-SANSLYNNDLLWPKSLGSDNNFNNFGNLN 120

Query: 121 VLRSGEPTHFKTPPDGSTQNQIPTIRSTPSTSSGALHPKV--NTKKRTRASRRAPTTVLT 180
              S    H        T   +P   S P  SS    P V  N KKR+RASRRAPTTVLT
Sbjct: 121 SSSSSATNHAIL----GTNTHVPNYNSIPIKSSIDHQPNVGKNPKKRSRASRRAPTTVLT 180

Query: 181 TDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSG 222
           TDTTNFR MVQEFTGIP+ PFT  GS+Y+RR DLF         STAT    SG
Sbjct: 181 TDTTNFRQMVQEFTGIPTTPFT--GSAYTRRLDLF---------STATSAIRSG 199

[Close]

BLAST of Csa3G895870 vs. NCBI nr
Match: gi|698531133|ref|XP_009762396.1| (PREDICTED: phosphatidylinositol 3-kinase 2-like [Nicotiana sylvestris])

HSP 1 Score: 127.1 bits (318), Expect = 4.4e-26
Identity = 98/228 (42.98%), Postives = 120/228 (52.63%), Query Frame = 1


Query: 1   MDSG-SGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASSSS 60
           MDSG SGS+QSSSGGDEEYDSH                     S S+  +SS+   S SS
Sbjct: 1   MDSGNSGSVQSSSGGDEEYDSH-------------------GGSISTFLNSSAHFGSISS 60

Query: 61  SSIPH---HQQSLPSFHNYQNNHH-LLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRSGE 120
           + +P    HQ +L    N+ +N      S Y+       +   D++ N+F NL+   S  
Sbjct: 61  NPLPQFLSHQHTLFDSQNFNSNFQDSANSLYNNDLIWPKSLGSDNNFNNFGNLNSSSSSA 120

Query: 121 PTHFKTPPDGSTQNQIPTIRSTPSTSSGALHPKV--NTKKRTRASRRAPTTVLTTDTTNF 180
             H        T  Q P+  S P  S+    P V  N KKR+RASRRAPTTVL TDTTNF
Sbjct: 121 TNHAIL----LTNTQGPSYDSIPIKSTIDHQPNVGKNPKKRSRASRRAPTTVLITDTTNF 180

Query: 181 RAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSG 222
           R MVQEFTGIP+ PFT  GS+Y+RR DLF         STAT +  SG
Sbjct: 181 RQMVQEFTGIPTTPFT--GSAYTRRLDLF---------STATSVIRSG 194

The following BLAST results are available for this feature:

BLAST of Csa3G895870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VQ22_ARATH	2.4e-08	44.71	VQ motif-containing protein 22 OS=Arabidopsis thaliana GN=VQ22 PE=2 SV=1	[more]

BLAST of Csa3G895870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJY7_CUCSA	3.1e-143	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G895870 PE=4 SV=1	[more]
A0A0D2U5Z7_GOSRA	6.2e-27	45.02	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G042200 PE=4 SV=1	[more]
A0A0D2SMF4_GOSRA	6.2e-27	45.02	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G042200 PE=4 SV=1	[more]
A0A0A0KGS8_CUCSA	4.0e-26	43.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500500 PE=4 SV=1	[more]
W9QN94_9ROSA	9.0e-26	42.02	Uncharacterized protein OS=Morus notabilis GN=L484_022090 PE=4 SV=1	[more]

BLAST of Csa3G895870 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G65170.1	5.9e-21	35.94	VQ motif-containing protein	[more]
AT1G35830.1	1.7e-20	42.60	VQ motif-containing protein	[more]
AT4G39720.1	4.3e-19	34.38	VQ motif-containing protein	[more]
AT3G22160.1	1.4e-09	44.71	VQ motif-containing protein	[more]
AT4G15120.1	3.1e-09	43.82	VQ motif-containing protein	[more]

BLAST of Csa3G895870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700205208\|gb\|KGN60341.1\|	4.4e-143	100.00	hypothetical protein Csa_3G895870 [Cucumis sativus]	[more]
gi\|778687794\|ref\|XP_011652626.1\|	7.5e-135	100.00	PREDICTED: uncharacterized protein DDB_G0271670-like [Cucumis sativus]	[more]
gi\|659132125\|ref\|XP_008466032.1\|	1.2e-124	94.69	PREDICTED: spindle pole body component 97-like [Cucumis melo]	[more]
gi\|697102703\|ref\|XP_009602610.1\|	3.4e-26	42.31	PREDICTED: epsin-like [Nicotiana tomentosiformis]	[more]
gi\|698531133\|ref\|XP_009762396.1\|	4.4e-26	42.98	PREDICTED: phosphatidylinositol 3-kinase 2-like [Nicotiana sylvestris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G895870.1	Csa3G895870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 160..187 score: 1.1
None	No IPR available	PANTHER	PTHR33179	FAMILY NOT NAMED	coord: 2..21 score: 1.4E-42coord: 43..216 score: 1.4
None	No IPR available	PANTHER	PTHR33179:SF4	SUBFAMILY NOT NAMED	coord: 2..21 score: 1.4E-42coord: 43..216 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G895870	Cla023128	Watermelon (97103) v1	cuwmB271
Csa3G895870	MELO3C003446	Melon (DHL92) v3.5.1	cumeB222
Csa3G895870	ClCG11G015340	Watermelon (Charleston Gray)	cuwcgB199
Csa3G895870	Lsi04G023470	Bottle gourd (USVL1VR-Ls)	culsiB191
Csa3G895870	MELO3C003446.2	Melon (DHL92) v3.6.1	cumedB208
Csa3G895870	Cla97C11G221350	Watermelon (97103) v2	cuwmbB191
Csa3G895870	Bhi09G002197	Wax gourd	cuwgoB340
Csa3G895870	CSPI03G46290	Wild cucumber (PI 183967)	cpicuB120
Csa3G895870	Cucsa.312720	Cucumber (Gy14) v1	cgycuB450
Csa3G895870	CmaCh01G014230	Cucurbita maxima (Rimu)	cmacuB454
Csa3G895870	CmoCh01G014720	Cucurbita moschata (Rifu)	cmocuB441
Csa3G895870	Cp4.1LG02g03510	Cucurbita pepo (Zucchini)	cpecuB546
Csa3G895870	CsGy3G043760	Cucumber (Gy14) v2	cgybcuB110
Csa3G895870	Carg03058	Silver-seed gourd	carcuB0655
Csa3G895870	Carg00368	Silver-seed gourd	carcuB0685

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None