Csa3G889920 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G889920
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr3 : 37886641 .. 37887084 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGATCCAGAGACGGCGATTCTGTTCACGAAAGCGCCACTTCCAGGAGTGGATGTTGGCGACGGAGCCAGTGCAGGAGGGTTTGAGATGGAAGAAGATGGAACTGGAGTGATCATTGGTGAGTCGGAAGGAGCAGTAGGTGGAGCTGGTGGAGAAGAAGCCGGAGCCATAGCTGGTGGTGAAGTTGCGGTGAAAGGAGCGGGAGCAACGCCGGACGGAGCAAGGGGTGAAGATGATGGAGGAGTCGCCACTGTTGGTGGAGGTGCAGATTTAGGAGAGGAGGCTGGGGACGATTTGGTTGGAGAAGAGGCCGGTGCGGCGCCCGGAGCTTGGCCAAGAGAGGCGGCTATTAAAGCTAAGAGAACGACGAAGACGAAGGCAGAGGAGGAAGCCATGGTGGTGAAGAAGAATGGGAAGAGAAGAGAAAAGAGAGAAGTTTGA

mRNA sequence

ATGATAGATCCAGAGACGGCGATTCTGTTCACGAAAGCGCCACTTCCAGGAGTGGATGTTGGCGACGGAGCCAGTGCAGGAGGGTTTGAGATGGAAGAAGATGGAACTGGAGTGATCATTGGTGAGTCGGAAGGAGCAGTAGGTGGAGCTGGTGGAGAAGAAGCCGGAGCCATAGCTGGTGGTGAAGTTGCGGTGAAAGGAGCGGGAGCAACGCCGGACGGAGCAAGGGGTGAAGATGATGGAGGAGTCGCCACTGTTGGTGGAGGTGCAGATTTAGGAGAGGAGGCTGGGGACGATTTGGTTGGAGAAGAGGCCGGTGCGGCGCCCGGAGCTTGGCCAAGAGAGGCGGCTATTAAAGCTAAGAGAACGACGAAGACGAAGGCAGAGGAGGAAGCCATGGTGGTGAAGAAGAATGGGAAGAGAAGAGAAAAGAGAGAAGTTTGA

Coding sequence (CDS)

ATGATAGATCCAGAGACGGCGATTCTGTTCACGAAAGCGCCACTTCCAGGAGTGGATGTTGGCGACGGAGCCAGTGCAGGAGGGTTTGAGATGGAAGAAGATGGAACTGGAGTGATCATTGGTGAGTCGGAAGGAGCAGTAGGTGGAGCTGGTGGAGAAGAAGCCGGAGCCATAGCTGGTGGTGAAGTTGCGGTGAAAGGAGCGGGAGCAACGCCGGACGGAGCAAGGGGTGAAGATGATGGAGGAGTCGCCACTGTTGGTGGAGGTGCAGATTTAGGAGAGGAGGCTGGGGACGATTTGGTTGGAGAAGAGGCCGGTGCGGCGCCCGGAGCTTGGCCAAGAGAGGCGGCTATTAAAGCTAAGAGAACGACGAAGACGAAGGCAGAGGAGGAAGCCATGGTGGTGAAGAAGAATGGGAAGAGAAGAGAAAAGAGAGAAGTTTGA

Protein sequence

MIDPETAILFTKAPLPGVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGAGATPDGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPGAWPREAAIKAKRTTKTKAEEEAMVVKKNGKRREKREV*

Homology

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BLAST of Csa3G889920 vs. Swiss-Prot
Match: EBNA1_EBVB9 (Epstein-Barr nuclear antigen 1 OS=Epstein-Barr virus (strain B95-8) GN=EBNA1 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.5e-06
Identity = 39/96 (40.62%), Postives = 37/96 (38.54%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGE--VAVKGAGATPDG 76
           G   G GA AGG      G G   G   GA GGAGG  AG  AGG       G      G
Sbjct: 123 GAGAGGGAGAGGGAGGAGGAGA--GGGAGAGGGAGGAGAGGGAGGAGGAGAGGGAGAGGG 182

Query: 77  ARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
           A G   GG A   GGA  G  AG    G   GA  G
Sbjct: 183 AGGAGAGGGAGGAGGAGAGGGAGAGGAGGAGGAGAG 216

HSP 2 Score: 47.4 bits (111), Expect = 1.6e-04
Identity = 36/87 (41.38%), Postives = 34/87 (39.08%), Query Frame = 1


Query: 23  GASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGE-VAVKGAGATPDGARGEDDG 82
           GA AGG      G G   G   GA GGAGG  AG  AGG   A  G GA   GA G    
Sbjct: 156 GAGAGGGAGGAGGAGA--GGGAGAGGGAGGAGAGGGAGGAGGAGAGGGAGAGGAGGAGGA 215

Query: 83  GVATVGGGADLGEEAGDDLVGEEAGAA 109
           G    G G   G   G    G  AG A
Sbjct: 216 GAGGAGAGGGAGGAGGAGAGGAGAGGA 240

HSP 3 Score: 44.3 bits (103), Expect = 1.4e-03
Identity = 34/79 (43.04%), Postives = 32/79 (40.51%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVA--VKGAGATPDG 76
           G     GA AGG      G G       GA GGAGG  AG  AGG  A    GAGA   G
Sbjct: 246 GAGGAGGAGAGG----AGGAGAGGAGGAGAGGGAGGAGAGGGAGGAGAGGAGGAGAGGAG 305

Query: 77  ARGEDDGGVATVGGGADLG 94
             G    G A  GGGA  G
Sbjct: 306 GAGAGGAGGAGAGGGAGAG 320

HSP 4 Score: 41.2 bits (95), Expect = 1.2e-02
Identity = 41/96 (42.71%), Postives = 40/96 (41.67%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVG-GAGGEEAGAIAGGEVAVKGAGATPDGA 76
           G   G GA AGG      G G   G + GA G GAGG   GA AGG     GAGA   GA
Sbjct: 168 GAGAGGGAGAGG---GAGGAGAG-GGAGGAGGAGAGG---GAGAGGAGGAGGAGAGGAGA 227

Query: 77  RGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPGA 112
            G   G      GGA  G   G    G  AG A GA
Sbjct: 228 GGGAGGAGGAGAGGAGAG---GAGAGGAGAGGAGGA 253

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BLAST of Csa3G889920 vs. Swiss-Prot
Match: EBNA1_EBVG (Epstein-Barr nuclear antigen 1 OS=Epstein-Barr virus (strain GD1) GN=EBNA1 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.5e-06
Identity = 39/96 (40.62%), Postives = 37/96 (38.54%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGE--VAVKGAGATPDG 76
           G   G GA AGG      G G   G   GA GGAGG  AG  AGG       G      G
Sbjct: 123 GAGAGGGAGAGGGAGGAGGAGA--GGGAGAGGGAGGAGAGGGAGGAGGAGAGGGAGAGGG 182

Query: 77  ARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
           A G   GG A   GGA  G  AG    G   GA  G
Sbjct: 183 AGGAGAGGGAGGAGGAGAGGGAGAGGAGGAGGAGAG 216

HSP 2 Score: 47.4 bits (111), Expect = 1.6e-04
Identity = 36/87 (41.38%), Postives = 34/87 (39.08%), Query Frame = 1


Query: 23  GASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGE-VAVKGAGATPDGARGEDDG 82
           GA AGG      G G   G   GA GGAGG  AG  AGG   A  G GA   GA G    
Sbjct: 156 GAGAGGGAGGAGGAGA--GGGAGAGGGAGGAGAGGGAGGAGGAGAGGGAGAGGAGGAGGA 215

Query: 83  GVATVGGGADLGEEAGDDLVGEEAGAA 109
           G    G G   G   G    G  AG A
Sbjct: 216 GAGGAGAGGGAGGAGGAGAGGAGAGGA 240

HSP 3 Score: 41.2 bits (95), Expect = 1.2e-02
Identity = 41/96 (42.71%), Postives = 40/96 (41.67%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVG-GAGGEEAGAIAGGEVAVKGAGATPDGA 76
           G   G GA AGG      G G   G + GA G GAGG   GA AGG     GAGA   GA
Sbjct: 168 GAGAGGGAGAGG---GAGGAGAG-GGAGGAGGAGAGG---GAGAGGAGGAGGAGAGGAGA 227

Query: 77  RGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPGA 112
            G   G      GGA  G   G    G  AG A GA
Sbjct: 228 GGGAGGAGGAGAGGAGAG---GAGAGGAGAGGAGGA 253

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BLAST of Csa3G889920 vs. TrEMBL
Match: A0A0A0LJM1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889920 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 2.4e-76
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1


Query: 1   MIDPETAILFTKAPLPGVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAG 60
           MIDPETAILFTKAPLPGVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAG
Sbjct: 1   MIDPETAILFTKAPLPGVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAG 60

Query: 61  GEVAVKGAGATPDGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPGAWPREAAIKA 120
           GEVAVKGAGATPDGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPGAWPREAAIKA
Sbjct: 61  GEVAVKGAGATPDGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPGAWPREAAIKA 120

Query: 121 KRTTKTKAEEEAMVVKKNGKRREKREV 148
           KRTTKTKAEEEAMVVKKNGKRREKREV
Sbjct: 121 KRTTKTKAEEEAMVVKKNGKRREKREV 147

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BLAST of Csa3G889920 vs. TrEMBL
Match: R1BRL1_EMIHU (Uncharacterized protein (Fragment) OS=Emiliania huxleyi GN=EMIHUDRAFT_124537 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.9e-06
Identity = 35/90 (38.89%), Postives = 41/90 (45.56%), Query Frame = 1


Query: 21  GDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGAGATPDGARGEDD 80
           G G + GG E + DG G   GE  G  GG GG E G + GGE    G G    G  G+ D
Sbjct: 183 GGGGAGGGGEGDSDGGG---GEGGGGAGG-GGAEGGGVGGGEGNSDGGGGAGGGGEGDSD 242

Query: 81  GGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
           GG    GGGA  G   G      ++G   G
Sbjct: 243 GGGGVGGGGAGGGGAGGGGEGDSDSGVGGG 268

[Close]

BLAST of Csa3G889920 vs. TrEMBL
Match: R1BRL1_EMIHU (Uncharacterized protein (Fragment) OS=Emiliania huxleyi GN=EMIHUDRAFT_124537 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-05
Identity = 37/100 (37.00%), Postives = 43/100 (43.00%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGAGATP---- 76
           G   G G + GG E + DG G + G   G  G  GG E  +  GG V   GAG       
Sbjct: 108 GGGAGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGG 167

Query: 77  --DGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
              G  G+ DGG +  GGGA  G E   D  G E G   G
Sbjct: 168 GVGGGEGDSDGGDSDGGGGAGGGGEGDSDGGGGEGGGGAG 207

HSP 2 Score: 54.3 bits (129), Expect = 1.5e-04
Identity = 34/92 (36.96%), Postives = 41/92 (44.57%), Query Frame = 1


Query: 21  GDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGAGA--TPDGARGE 80
           G G + GG E + DG G + G   G  G  GG E  +  GG V   GAG      G  G+
Sbjct: 88  GGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGD 147

Query: 81  DDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
            DGG    GGGA  G   G  + G E  +  G
Sbjct: 148 SDGGGGVGGGGAGGGGAGGGGVGGGEGDSDGG 179

HSP 3 Score: 54.3 bits (129), Expect = 1.5e-04
Identity = 34/92 (36.96%), Postives = 41/92 (44.57%), Query Frame = 1


Query: 21  GDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGAGA--TPDGARGE 80
           G G + GG E + DG G + G   G  G  GG E  +  GG V   GAG      G  G+
Sbjct: 348 GGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGD 407

Query: 81  DDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
            DGG    GGGA  G   G  + G E  +  G
Sbjct: 408 SDGGGGVGGGGAGGGGAGGGGVGGGEGDSDGG 439

HSP 4 Score: 52.0 bits (123), Expect = 7.3e-04
Identity = 37/110 (33.64%), Postives = 44/110 (40.00%), Query Frame = 1


Query: 6   TAILFTKAPLPGVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEV-- 65
           TA   T A  P   V   A+ GG E + DG G   G+  G  GG GG   G + GG+   
Sbjct: 26  TAAAATPAKAPAATVQPAAAVGGGEGDSDGGG---GDGGGGAGG-GGAGGGGVGGGDGDS 85

Query: 66  ---AVKGAGATPDGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
                 G G    G  G+ DGG    GGGA  G   G      + G   G
Sbjct: 86  DGGGGDGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVG 131

HSP 5 Score: 51.2 bits (121), Expect = 1.2e-03
Identity = 34/100 (34.00%), Postives = 40/100 (40.00%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGAGATP---- 76
           G   G G + GG E + DG G + G   G  G  GG E  +  GG V   GAG       
Sbjct: 368 GGGAGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGG 427

Query: 77  --DGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
              G  G+ DGG    GGGA  G   G      + G   G
Sbjct: 428 GVGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVG 467

HSP 6 Score: 50.8 bits (120), Expect = 1.6e-03
Identity = 35/98 (35.71%), Postives = 42/98 (42.86%), Query Frame = 1


Query: 21  GDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGA---IAGGEVAVKGAGATPDGARG 80
           G G + GG E + DG G + G   G  G  GG E  +   + GG     GAG    G  G
Sbjct: 225 GGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDSGVGGGGAGGCGAGG---GGEG 284

Query: 81  EDDGGVATVGGGADLGEEAG-----DDLVGEEAGAAPG 111
           + DGG    GGGA  G   G      D  G+E G   G
Sbjct: 285 DSDGGGGVGGGGAGGGGAGGGGEGDSDGCGDEGGGGAG 319

HSP 7 Score: 50.4 bits (119), Expect = 2.1e-03
Identity = 36/99 (36.36%), Postives = 43/99 (43.43%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGA-----GAT 76
           G   G G + GG E + DG G + G   G  GGAGG   G + GGE    G      G  
Sbjct: 132 GGGAGGGGAGGGGEGDSDGGGGVGGGGAGG-GGAGG---GGVGGGEGDSDGGDSDGGGGA 191

Query: 77  PDGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
             G  G+ DGG    GGGA  G   G  + G E  +  G
Sbjct: 192 GGGGEGDSDGGGGEGGGGAGGGGAEGGGVGGGEGNSDGG 226

HSP 8 Score: 50.4 bits (119), Expect = 2.1e-03
Identity = 35/100 (35.00%), Postives = 41/100 (41.00%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVG----GAGGEEAGAIAGGEVAVKGAGA-- 76
           G   G G + GG E + DG G + G   G  G    G GG E  +  GG V   GAG   
Sbjct: 392 GGGAGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGVGGGEGDSDGGGGVGGGGAGGGG 451

Query: 77  TPDGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
              G  G+ DGG    GGGA  G   G      + G   G
Sbjct: 452 AGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGEG 491

HSP 9 Score: 50.1 bits (118), Expect = 2.8e-03
Identity = 33/96 (34.38%), Postives = 39/96 (40.62%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGAGA--TPDG 76
           G   G G + GG E + DG G +     G  G  GG E  +  GG V   GAG      G
Sbjct: 320 GGGAGGGGAGGGGEGDSDGGGGVGCGGAGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGG 379

Query: 77  ARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
             G+ DGG    GGGA  G   G      + G   G
Sbjct: 380 GEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVG 415

HSP 10 Score: 48.1 bits (113), Expect = 1.1e-02
Identity = 34/104 (32.69%), Postives = 38/104 (36.54%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGE----------VAVK 76
           G   G G + GG E + DG G    E  G  GG G    GA  GGE              
Sbjct: 291 GGGAGGGGAGGGGEGDSDGCG---DEGGGGAGGGGAGGGGAGGGGEGDSDGGGGVGCGGA 350

Query: 77  GAGATPDGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
           G G    G  G+ DGG    GGGA  G   G      + G   G
Sbjct: 351 GGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVG 391

HSP 11 Score: 46.2 bits (108), Expect = 4.0e-02
Identity = 36/94 (38.30%), Postives = 38/94 (40.43%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGAGATPDGAR 76
           GV  GDG S GG     DG G   G  EG   G GG   G   GG     GAG    G  
Sbjct: 73  GVGGGDGDSDGG---GGDGGGGAGGGGEGDSDGGGGVGGGGAGGG-----GAGG---GGE 132

Query: 77  GEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
           G+ DGG    GGGA  G   G      + G   G
Sbjct: 133 GDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVG 155

[Close]

BLAST of Csa3G889920 vs. TAIR10
Match: AT5G07540.1 (AT5G07540.1 glycine-rich protein 16)

HSP 1 Score: 50.1 bits (118), Expect = 1.4e-06
Identity = 35/97 (36.08%), Postives = 39/97 (40.21%), Query Frame = 1


Query: 16  PGVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGAGATPDGA 75
           P  D   GAS GG +      G   G S GA GGA G  +G  +GG      +G  P GA
Sbjct: 129 PSGDKPGGASGGGDKPGGASGGGPGGASGGASGGASGGASGGASGG-----ASGGGPGGA 188

Query: 76  RGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPGAW 113
            G   GG +  G G   G  +GD   G       GAW
Sbjct: 189 SGGGPGGASGGGPGGASGGASGDKPEGAPGDKPGGAW 220

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BLAST of Csa3G889920 vs. NCBI nr
Match: gi|700205103|gb|KGN60236.1| (hypothetical protein Csa_3G889920 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 3.5e-76
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1


Query: 1   MIDPETAILFTKAPLPGVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAG 60
           MIDPETAILFTKAPLPGVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAG
Sbjct: 1   MIDPETAILFTKAPLPGVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAG 60

Query: 61  GEVAVKGAGATPDGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPGAWPREAAIKA 120
           GEVAVKGAGATPDGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPGAWPREAAIKA
Sbjct: 61  GEVAVKGAGATPDGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPGAWPREAAIKA 120

Query: 121 KRTTKTKAEEEAMVVKKNGKRREKREV 148
           KRTTKTKAEEEAMVVKKNGKRREKREV
Sbjct: 121 KRTTKTKAEEEAMVVKKNGKRREKREV 147

[Close]

BLAST of Csa3G889920 vs. NCBI nr
Match: gi|116204407|ref|XP_001228014.1| (predicted protein [Chaetomium globosum CBS 148.51])

HSP 1 Score: 59.7 bits (143), Expect = 5.0e-06
Identity = 40/104 (38.46%), Postives = 44/104 (42.31%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGAGATPDGAR 76
           G   G G   GG        G   G + GA GGA G  AG  AGG V    AG   D   
Sbjct: 115 GKGKGKGKGKGGAAAGGGAAGAAGGAAGGAAGGAAGGAAGGAAGGAVGGGAAGNGTDAGA 174

Query: 77  GEDDGGVATVGGGADLGEEAG---------DDLVGEEAGAAPGA 112
           G D G  A  G GAD+G  AG         D+  G +AGA  GA
Sbjct: 175 GVDAGAGADAGAGADVGAGAGVGSGSGTGTDNGTGTDAGAGTGA 218

[Close]

BLAST of Csa3G889920 vs. NCBI nr
Match: gi|551556095|ref|XP_005765187.1| (hypothetical protein EMIHUDRAFT_124537, partial [Emiliania huxleyi CCMP1516])

HSP 1 Score: 58.9 bits (141), Expect = 8.5e-06
Identity = 35/90 (38.89%), Postives = 41/90 (45.56%), Query Frame = 1


Query: 21  GDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGAGATPDGARGEDD 80
           G G + GG E + DG G   GE  G  GG GG E G + GGE    G G    G  G+ D
Sbjct: 183 GGGGAGGGGEGDSDGGG---GEGGGGAGG-GGAEGGGVGGGEGNSDGGGGAGGGGEGDSD 242

Query: 81  GGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
           GG    GGGA  G   G      ++G   G
Sbjct: 243 GGGGVGGGGAGGGGAGGGGEGDSDSGVGGG 268

[Close]

BLAST of Csa3G889920 vs. NCBI nr
Match: gi|551556095|ref|XP_005765187.1| (hypothetical protein EMIHUDRAFT_124537, partial [Emiliania huxleyi CCMP1516])

HSP 1 Score: 57.0 bits (136), Expect = 3.2e-05
Identity = 37/100 (37.00%), Postives = 43/100 (43.00%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGAGATP---- 76
           G   G G + GG E + DG G + G   G  G  GG E  +  GG V   GAG       
Sbjct: 108 GGGAGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGG 167

Query: 77  --DGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
              G  G+ DGG +  GGGA  G E   D  G E G   G
Sbjct: 168 GVGGGEGDSDGGDSDGGGGAGGGGEGDSDGGGGEGGGGAG 207

HSP 2 Score: 54.3 bits (129), Expect = 2.1e-04
Identity = 34/92 (36.96%), Postives = 41/92 (44.57%), Query Frame = 1


Query: 21  GDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGAGA--TPDGARGE 80
           G G + GG E + DG G + G   G  G  GG E  +  GG V   GAG      G  G+
Sbjct: 88  GGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGD 147

Query: 81  DDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
            DGG    GGGA  G   G  + G E  +  G
Sbjct: 148 SDGGGGVGGGGAGGGGAGGGGVGGGEGDSDGG 179

HSP 3 Score: 54.3 bits (129), Expect = 2.1e-04
Identity = 34/92 (36.96%), Postives = 41/92 (44.57%), Query Frame = 1


Query: 21  GDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGAGA--TPDGARGE 80
           G G + GG E + DG G + G   G  G  GG E  +  GG V   GAG      G  G+
Sbjct: 348 GGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGD 407

Query: 81  DDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
            DGG    GGGA  G   G  + G E  +  G
Sbjct: 408 SDGGGGVGGGGAGGGGAGGGGVGGGEGDSDGG 439

HSP 4 Score: 52.0 bits (123), Expect = 1.0e-03
Identity = 37/110 (33.64%), Postives = 44/110 (40.00%), Query Frame = 1


Query: 6   TAILFTKAPLPGVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEV-- 65
           TA   T A  P   V   A+ GG E + DG G   G+  G  GG GG   G + GG+   
Sbjct: 26  TAAAATPAKAPAATVQPAAAVGGGEGDSDGGG---GDGGGGAGG-GGAGGGGVGGGDGDS 85

Query: 66  ---AVKGAGATPDGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
                 G G    G  G+ DGG    GGGA  G   G      + G   G
Sbjct: 86  DGGGGDGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVG 131

HSP 5 Score: 51.2 bits (121), Expect = 1.8e-03
Identity = 34/100 (34.00%), Postives = 40/100 (40.00%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGAGATP---- 76
           G   G G + GG E + DG G + G   G  G  GG E  +  GG V   GAG       
Sbjct: 368 GGGAGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGG 427

Query: 77  --DGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
              G  G+ DGG    GGGA  G   G      + G   G
Sbjct: 428 GVGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVG 467

HSP 6 Score: 50.8 bits (120), Expect = 2.3e-03
Identity = 35/98 (35.71%), Postives = 42/98 (42.86%), Query Frame = 1


Query: 21  GDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGA---IAGGEVAVKGAGATPDGARG 80
           G G + GG E + DG G + G   G  G  GG E  +   + GG     GAG    G  G
Sbjct: 225 GGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDSGVGGGGAGGCGAGG---GGEG 284

Query: 81  EDDGGVATVGGGADLGEEAG-----DDLVGEEAGAAPG 111
           + DGG    GGGA  G   G      D  G+E G   G
Sbjct: 285 DSDGGGGVGGGGAGGGGAGGGGEGDSDGCGDEGGGGAG 319

HSP 7 Score: 50.4 bits (119), Expect = 3.0e-03
Identity = 36/99 (36.36%), Postives = 43/99 (43.43%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGA-----GAT 76
           G   G G + GG E + DG G + G   G  GGAGG   G + GGE    G      G  
Sbjct: 132 GGGAGGGGAGGGGEGDSDGGGGVGGGGAGG-GGAGG---GGVGGGEGDSDGGDSDGGGGA 191

Query: 77  PDGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
             G  G+ DGG    GGGA  G   G  + G E  +  G
Sbjct: 192 GGGGEGDSDGGGGEGGGGAGGGGAEGGGVGGGEGNSDGG 226

HSP 8 Score: 50.4 bits (119), Expect = 3.0e-03
Identity = 35/100 (35.00%), Postives = 41/100 (41.00%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVG----GAGGEEAGAIAGGEVAVKGAGA-- 76
           G   G G + GG E + DG G + G   G  G    G GG E  +  GG V   GAG   
Sbjct: 392 GGGAGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGVGGGEGDSDGGGGVGGGGAGGGG 451

Query: 77  TPDGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
              G  G+ DGG    GGGA  G   G      + G   G
Sbjct: 452 AGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGEG 491

HSP 9 Score: 50.1 bits (118), Expect = 4.0e-03
Identity = 33/96 (34.38%), Postives = 39/96 (40.62%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGAGA--TPDG 76
           G   G G + GG E + DG G +     G  G  GG E  +  GG V   GAG      G
Sbjct: 320 GGGAGGGGAGGGGEGDSDGGGGVGCGGAGGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGG 379

Query: 77  ARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
             G+ DGG    GGGA  G   G      + G   G
Sbjct: 380 GEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVG 415

HSP 10 Score: 48.1 bits (113), Expect = 1.5e-02
Identity = 34/104 (32.69%), Postives = 38/104 (36.54%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGE----------VAVK 76
           G   G G + GG E + DG G    E  G  GG G    GA  GGE              
Sbjct: 291 GGGAGGGGAGGGGEGDSDGCG---DEGGGGAGGGGAGGGGAGGGGEGDSDGGGGVGCGGA 350

Query: 77  GAGATPDGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
           G G    G  G+ DGG    GGGA  G   G      + G   G
Sbjct: 351 GGGGAGGGGEGDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVG 391

HSP 11 Score: 46.2 bits (108), Expect = 5.7e-02
Identity = 36/94 (38.30%), Postives = 38/94 (40.43%), Query Frame = 1


Query: 17  GVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAGGEVAVKGAGATPDGAR 76
           GV  GDG S GG     DG G   G  EG   G GG   G   GG     GAG    G  
Sbjct: 73  GVGGGDGDSDGG---GGDGGGGAGGGGEGDSDGGGGVGGGGAGGG-----GAGG---GGE 132

Query: 77  GEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPG 111
           G+ DGG    GGGA  G   G      + G   G
Sbjct: 133 GDSDGGGGVGGGGAGGGGAGGGGEGDSDGGGGVG 155

The following BLAST results are available for this feature:

BLAST of Csa3G889920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EBNA1_EBVB9	6.5e-06	40.63	Epstein-Barr nuclear antigen 1 OS=Epstein-Barr virus (strain B95-8) GN=EBNA1 PE=...	[more]
EBNA1_EBVG	6.5e-06	40.63	Epstein-Barr nuclear antigen 1 OS=Epstein-Barr virus (strain GD1) GN=EBNA1 PE=1 ...	[more]

BLAST of Csa3G889920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJM1_CUCSA	2.4e-76	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889920 PE=4 SV=1	[more]
R1BRL1_EMIHU	5.9e-06	38.89	Uncharacterized protein (Fragment) OS=Emiliania huxleyi GN=EMIHUDRAFT_124537 PE=...	[more]
R1BRL1_EMIHU	2.3e-05	37.00	Uncharacterized protein (Fragment) OS=Emiliania huxleyi GN=EMIHUDRAFT_124537 PE=...	[more]

BLAST of Csa3G889920 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07540.1	1.4e-06	36.08	glycine-rich protein 16	[more]

BLAST of Csa3G889920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700205103\|gb\|KGN60236.1\|	3.5e-76	100.00	hypothetical protein Csa_3G889920 [Cucumis sativus]	[more]
gi\|116204407\|ref\|XP_001228014.1\|	5.0e-06	38.46	predicted protein [Chaetomium globosum CBS 148.51]	[more]
gi\|551556095\|ref\|XP_005765187.1\|	8.5e-06	38.89	hypothetical protein EMIHUDRAFT_124537, partial [Emiliania huxleyi CCMP1516]	[more]
gi\|551556095\|ref\|XP_005765187.1\|	3.2e-05	37.00	hypothetical protein EMIHUDRAFT_124537, partial [Emiliania huxleyi CCMP1516]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU091592	cucumber EST collection version 3.0	transcribed_cluster
CU120878	cucumber EST collection version 3.0	transcribed_cluster
CU153411	cucumber EST collection version 3.0	transcribed_cluster
CU155318	cucumber EST collection version 3.0	transcribed_cluster
CU162896	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G889920.1	Csa3G889920.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU120878	CU120878	transcribed_cluster
CU091592	CU091592	transcribed_cluster
CU162896	CU162896	transcribed_cluster
CU155318	CU155318	transcribed_cluster
CU153411	CU153411	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G889920	Wax gourd	cuwgoB315
Csa3G889920	Wax gourd	cuwgoB340
Csa3G889920	Cucumber (Chinese Long) v2	cucuB052
Csa3G889920	Cucumber (Chinese Long) v2	cucuB122
Csa3G889920	Cucumber (Gy14) v1	cgycuB119
Csa3G889920	Cucumber (Gy14) v1	cgycuB236
Csa3G889920	Cucumber (Gy14) v1	cgycuB450
Csa3G889920	Cucurbita maxima (Rimu)	cmacuB014
Csa3G889920	Cucurbita maxima (Rimu)	cmacuB180
Csa3G889920	Cucurbita maxima (Rimu)	cmacuB445
Csa3G889920	Cucurbita maxima (Rimu)	cmacuB796
Csa3G889920	Cucurbita moschata (Rifu)	cmocuB005
Csa3G889920	Cucurbita moschata (Rifu)	cmocuB164
Csa3G889920	Cucurbita moschata (Rifu)	cmocuB432
Csa3G889920	Cucurbita moschata (Rifu)	cmocuB789
Csa3G889920	Melon (DHL92) v3.5.1	cumeB205
Csa3G889920	Melon (DHL92) v3.5.1	cumeB222
Csa3G889920	Melon (DHL92) v3.5.1	cumeB263
Csa3G889920	Watermelon (Charleston Gray)	cuwcgB199
Csa3G889920	Watermelon (Charleston Gray)	cuwcgB210
Csa3G889920	Watermelon (Charleston Gray)	cuwcgB260
Csa3G889920	Watermelon (97103) v1	cuwmB208
Csa3G889920	Watermelon (97103) v1	cuwmB264
Csa3G889920	Watermelon (97103) v1	cuwmB271
Csa3G889920	Cucurbita pepo (Zucchini)	cpecuB111
Csa3G889920	Cucurbita pepo (Zucchini)	cpecuB557
Csa3G889920	Cucurbita pepo (Zucchini)	cpecuB776
Csa3G889920	Cucurbita pepo (Zucchini)	cpecuB827
Csa3G889920	Bottle gourd (USVL1VR-Ls)	culsiB166
Csa3G889920	Bottle gourd (USVL1VR-Ls)	culsiB191
Csa3G889920	Bottle gourd (USVL1VR-Ls)	culsiB238
Csa3G889920	Cucumber (Gy14) v2	cgybcuB067
Csa3G889920	Cucumber (Gy14) v2	cgybcuB110
Csa3G889920	Cucumber (Gy14) v2	cgybcuB265
Csa3G889920	Melon (DHL92) v3.6.1	cumedB191
Csa3G889920	Melon (DHL92) v3.6.1	cumedB208
Csa3G889920	Melon (DHL92) v3.6.1	cumedB253
Csa3G889920	Silver-seed gourd	carcuB0061
Csa3G889920	Silver-seed gourd	carcuB0437
Csa3G889920	Silver-seed gourd	carcuB0655
Csa3G889920	Watermelon (97103) v2	cuwmbB180
Csa3G889920	Watermelon (97103) v2	cuwmbB191
Csa3G889920	Watermelon (97103) v2	cuwmbB246