Csa3G875940 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G875940
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionProtein kinase like protein; contains IPR011009 (Protein kinase-like domain)
LocationChr3 : 36659192 .. 36659478 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTTGTTGGTGAATGCAAGGTTATTGAGCACAAACCGTACGATCATAAAGCTGATGTTTATAGCTTTGGGATAGTGTTGTGGGAGCTGCTTACAGGACAGGTAAATCCGTTTCTTTTGTTATAAATGCAAGCATTCGTTTTTATTTTCTTCCTAACCATGTTGGGGTTGCAATCTTGACATTGTGTCTGGAATGGCAGCTGCCTTATAATAACTTGACTCCGTTACAAGCAGCAATAGGAGTAGTCCAGAAGGTATTTCCATATTCACACCATATTAAATAA

mRNA sequence

ATGTTTGTTGTTGGTGAATGCAAGGTTATTGAGCACAAACCGTACGATCATAAAGCTGATGTTTATAGCTTTGGGATAGTGTTGTGGGAGCTGCTTACAGGACAGCTGCCTTATAATAACTTGACTCCGTTACAAGCAGCAATAGGAGTAGTCCAGAAGGTATTTCCATATTCACACCATATTAAATAA

Coding sequence (CDS)

ATGTTTGTTGTTGGTGAATGCAAGGTTATTGAGCACAAACCGTACGATCATAAAGCTGATGTTTATAGCTTTGGGATAGTGTTGTGGGAGCTGCTTACAGGACAGCTGCCTTATAATAACTTGACTCCGTTACAAGCAGCAATAGGAGTAGTCCAGAAGGTATTTCCATATTCACACCATATTAAATAA

Protein sequence

MFVVGECKVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQKVFPYSHHIK*
Homology
[Close]
BLAST of Csa3G875940 vs. Swiss-Prot
Match: STY46_ARATH (Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana GN=STY46 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.3e-16
Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 1 

Query: 8   KVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 54
           +VIEHKPYDHKADV+S+GIVLWELLTG+LPY  +TPLQAA+GVVQK
Sbjct: 455 EVIEHKPYDHKADVFSYGIVLWELLTGKLPYEYMTPLQAAVGVVQK 500

[Close]
BLAST of Csa3G875940 vs. Swiss-Prot
Match: STY17_ARATH (Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana GN=STY17 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 5.1e-16
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = 1 

Query: 8   KVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 54
           +VIEHKPYDH+ADV+S+ IVLWELLTG+LPY+ LTPLQAA+GVVQK
Sbjct: 457 EVIEHKPYDHRADVFSYAIVLWELLTGELPYSYLTPLQAAVGVVQK 502

[Close]
BLAST of Csa3G875940 vs. Swiss-Prot
Match: STY8_ARATH (Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana GN=STY8 PE=1 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 7.3e-15
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 1 

Query: 8   KVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 54
           +VIEHKPY+HKADV+S+ IVLWELLTG +PY  LTPLQAA+GVVQK
Sbjct: 451 EVIEHKPYNHKADVFSYAIVLWELLTGDIPYAFLTPLQAAVGVVQK 496

[Close]
BLAST of Csa3G875940 vs. Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.1e-09
Identity = 27/46 (58.70%), Postives = 32/46 (69.57%), Query Frame = 1 

Query: 8   KVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 54
           ++I+ KPY  K DVYSFGIVLWEL T  LP+  +TP+QAA  V +K
Sbjct: 256 EMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEK 301

[Close]
BLAST of Csa3G875940 vs. Swiss-Prot
Match: Y9963_DICDI (Probable serine/threonine-protein kinase DDB_G0272254 OS=Dictyostelium discoideum GN=DDB_G0272254 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.6e-07
Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 1 

Query: 8    KVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 54
            +++ H+ Y+ KADVYS+ IVL+ELLTG+ PY  + P+ A I V  K
Sbjct: 1243 EILRHESYNQKADVYSYAIVLYELLTGEEPYQGIPPMNAGILVASK 1288

[Close]
BLAST of Csa3G875940 vs. TrEMBL
Match: A0A0A0LDM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875940 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 6.2e-29
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MFVVGECKVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQKVFPYSHH 60
          MFVVGECKVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQKVFPYSHH
Sbjct: 1  MFVVGECKVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQKVFPYSHH 60

Query: 61 IK 63
          IK
Sbjct: 61 IK 62

[Close]
BLAST of Csa3G875940 vs. TrEMBL
Match: M5VWD4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003462mg PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 4.6e-16
Identity = 41/46 (89.13%), Postives = 46/46 (100.00%), Query Frame = 1 

Query: 8   KVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 54
           +VIEHKPYDHKADV+SFGIVLWELLTGQLPY++LTPLQAA+GVVQK
Sbjct: 458 EVIEHKPYDHKADVFSFGIVLWELLTGQLPYSSLTPLQAAVGVVQK 503

[Close]
BLAST of Csa3G875940 vs. TrEMBL
Match: A0A061FDQ8_THECC (ACT-like protein tyrosine kinase family protein isoform 1 OS=Theobroma cacao GN=TCM_034314 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 6.0e-16
Identity = 44/59 (74.58%), Postives = 49/59 (83.05%), Query Frame = 1 

Query: 8   KVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK----VFPYSHHIK 63
           +VIEHKPYDHKADV+SFG+VLWELLTG+LPY NLTPLQAA+GVVQK    V P   H K
Sbjct: 456 EVIEHKPYDHKADVFSFGVVLWELLTGKLPYENLTPLQAALGVVQKGLRPVIPKHTHPK 514

[Close]
BLAST of Csa3G875940 vs. TrEMBL
Match: A0A0D2TSH9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G190600 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.0e-15
Identity = 39/46 (84.78%), Postives = 45/46 (97.83%), Query Frame = 1 

Query: 8   KVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 54
           +VIEHKPYDHKADV+SFG+VLWE+LTG+LPY NLTPLQAA+GVVQK
Sbjct: 334 EVIEHKPYDHKADVFSFGVVLWEMLTGKLPYENLTPLQAAVGVVQK 379

[Close]
BLAST of Csa3G875940 vs. TrEMBL
Match: A0A0D2TMJ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G190600 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.0e-15
Identity = 39/46 (84.78%), Postives = 45/46 (97.83%), Query Frame = 1 

Query: 8   KVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 54
           +VIEHKPYDHKADV+SFG+VLWE+LTG+LPY NLTPLQAA+GVVQK
Sbjct: 281 EVIEHKPYDHKADVFSFGVVLWEMLTGKLPYENLTPLQAAVGVVQK 326

[Close]
BLAST of Csa3G875940 vs. TAIR10
Match: AT4G38470.1 (AT4G38470.1 ACT-like protein tyrosine kinase family protein)

HSP 1 Score: 86.3 bits (212), Expect = 7.5e-18
Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 1 

Query: 8   KVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 54
           +VIEHKPYDHKADV+S+GIVLWELLTG+LPY  +TPLQAA+GVVQK
Sbjct: 455 EVIEHKPYDHKADVFSYGIVLWELLTGKLPYEYMTPLQAAVGVVQK 500

[Close]
BLAST of Csa3G875940 vs. TAIR10
Match: AT4G35780.1 (AT4G35780.1 ACT-like protein tyrosine kinase family protein)

HSP 1 Score: 84.3 bits (207), Expect = 2.8e-17
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = 1 

Query: 8   KVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 54
           +VIEHKPYDH+ADV+S+ IVLWELLTG+LPY+ LTPLQAA+GVVQK
Sbjct: 457 EVIEHKPYDHRADVFSYAIVLWELLTGELPYSYLTPLQAAVGVVQK 502

[Close]
BLAST of Csa3G875940 vs. TAIR10
Match: AT2G17700.1 (AT2G17700.1 ACT-like protein tyrosine kinase family protein)

HSP 1 Score: 80.5 bits (197), Expect = 4.1e-16
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 1 

Query: 8   KVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 54
           +VIEHKPY+HKADV+S+ IVLWELLTG +PY  LTPLQAA+GVVQK
Sbjct: 451 EVIEHKPYNHKADVFSYAIVLWELLTGDIPYAFLTPLQAAVGVVQK 496

[Close]
BLAST of Csa3G875940 vs. TAIR10
Match: AT4G31170.1 (AT4G31170.1 Protein kinase superfamily protein)

HSP 1 Score: 67.0 bits (162), Expect = 4.7e-12
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 1 

Query: 8   KVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 54
           ++I+H+PY  K DVYSFGIVLWEL+TG LP+ N+T +QAA  VV +
Sbjct: 301 EMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNR 346

[Close]
BLAST of Csa3G875940 vs. TAIR10
Match: AT2G24360.1 (AT2G24360.1 Protein kinase superfamily protein)

HSP 1 Score: 64.7 bits (156), Expect = 2.3e-11
Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 1 

Query: 8   KVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 54
           ++I+H+ Y+ K DVYSFGIVLWEL+TG LP+ N+T +QAA  VV +
Sbjct: 300 EMIQHRAYNQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNR 345

[Close]
BLAST of Csa3G875940 vs. NCBI nr
Match: gi|700204937|gb|KGN60070.1| (hypothetical protein Csa_3G875940 [Cucumis sativus])

HSP 1 Score: 134.0 bits (336), Expect = 8.9e-29
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MFVVGECKVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQKVFPYSHH 60
          MFVVGECKVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQKVFPYSHH
Sbjct: 1  MFVVGECKVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQKVFPYSHH 60

Query: 61 IK 63
          IK
Sbjct: 61 IK 62

[Close]
BLAST of Csa3G875940 vs. NCBI nr
Match: gi|778686869|ref|XP_011652461.1| (PREDICTED: serine/threonine-protein kinase HT1-like [Cucumis sativus])

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MFVVGECKVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 54
          MFVVGECKVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK
Sbjct: 1  MFVVGECKVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 53

[Close]
BLAST of Csa3G875940 vs. NCBI nr
Match: gi|659132907|ref|XP_008466449.1| (PREDICTED: ephrin type-B receptor 3-like isoform X3 [Cucumis melo])

HSP 1 Score: 97.1 bits (240), Expect = 1.2e-17
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1 

Query: 8   KVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 54
           +VIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK
Sbjct: 437 EVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 482

[Close]
BLAST of Csa3G875940 vs. NCBI nr
Match: gi|659132909|ref|XP_008466450.1| (PREDICTED: serine/threonine-protein kinase HT1-like isoform X4 [Cucumis melo])

HSP 1 Score: 97.1 bits (240), Expect = 1.2e-17
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1 

Query: 8   KVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 54
           +VIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK
Sbjct: 419 EVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 464

[Close]
BLAST of Csa3G875940 vs. NCBI nr
Match: gi|659132903|ref|XP_008466447.1| (PREDICTED: tyrosine-protein kinase Abl-like isoform X2 [Cucumis melo])

HSP 1 Score: 97.1 bits (240), Expect = 1.2e-17
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1 

Query: 8   KVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 54
           +VIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK
Sbjct: 452 EVIEHKPYDHKADVYSFGIVLWELLTGQLPYNNLTPLQAAIGVVQK 497

The following BLAST results are available for this feature:
BLAST of Csa3G875940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
STY46_ARATH1.3e-1682.61Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana GN=STY46 PE=1 SV=1[more]
STY17_ARATH5.1e-1680.43Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana GN=STY17 PE=1 SV=1[more]
STY8_ARATH7.3e-1578.26Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana GN=STY8 PE=1 SV=2[more]
HT1_ARATH2.1e-0958.70Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1[more]
Y9963_DICDI5.6e-0750.00Probable serine/threonine-protein kinase DDB_G0272254 OS=Dictyostelium discoideu... [more]
BLAST of Csa3G875940 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDM8_CUCSA6.2e-29100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875940 PE=4 SV=1[more]
M5VWD4_PRUPE4.6e-1689.13Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003462mg PE=3 SV=1[more]
A0A061FDQ8_THECC6.0e-1674.58ACT-like protein tyrosine kinase family protein isoform 1 OS=Theobroma cacao GN=... [more]
A0A0D2TSH9_GOSRA1.0e-1584.78Uncharacterized protein OS=Gossypium raimondii GN=B456_009G190600 PE=4 SV=1[more]
A0A0D2TMJ4_GOSRA1.0e-1584.78Uncharacterized protein OS=Gossypium raimondii GN=B456_009G190600 PE=4 SV=1[more]
BLAST of Csa3G875940 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G38470.17.5e-1882.61 ACT-like protein tyrosine kinase family protein[more]
AT4G35780.12.8e-1780.43 ACT-like protein tyrosine kinase family protein[more]
AT2G17700.14.1e-1678.26 ACT-like protein tyrosine kinase family protein[more]
AT4G31170.14.7e-1260.87 Protein kinase superfamily protein[more]
AT2G24360.12.3e-1158.70 Protein kinase superfamily protein[more]
BLAST of Csa3G875940 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700204937|gb|KGN60070.1|8.9e-29100.00hypothetical protein Csa_3G875940 [Cucumis sativus][more]
gi|778686869|ref|XP_011652461.1|1.2e-22100.00PREDICTED: serine/threonine-protein kinase HT1-like [Cucumis sativus][more]
gi|659132907|ref|XP_008466449.1|1.2e-1797.83PREDICTED: ephrin type-B receptor 3-like isoform X3 [Cucumis melo][more]
gi|659132909|ref|XP_008466450.1|1.2e-1797.83PREDICTED: serine/threonine-protein kinase HT1-like isoform X4 [Cucumis melo][more]
gi|659132903|ref|XP_008466447.1|1.2e-1797.83PREDICTED: tyrosine-protein kinase Abl-like isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR001245Ser-Thr/Tyr_kinase_cat_dom
IPR011009Kinase-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0016597 amino acid binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004713 protein tyrosine kinase activity
molecular_function GO:0004672 protein kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G875940.1Csa3G875940.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000719Protein kinase domainPROFILEPS50011PROTEIN_KINASE_DOMcoord: 1..62
score: 10
IPR001245Serine-threonine/tyrosine-protein kinase catalytic domainPFAMPF07714Pkinase_Tyrcoord: 9..46
score: 5.
IPR011009Protein kinase-like domainunknownSSF56112Protein kinase-like (PK-like)coord: 9..56
score: 1.48
NoneNo IPR availableGENE3DG3DSA:1.10.510.10coord: 9..55
score: 3.7
NoneNo IPR availablePANTHERPTHR23257SERINE-THREONINE PROTEIN KINASEcoord: 9..53
score: 1.4
NoneNo IPR availablePANTHERPTHR23257:SF471SUBFAMILY NOT NAMEDcoord: 9..53
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G875940MELO3C003722Melon (DHL92) v3.5.1cumeB222
Csa3G875940CmoCh01G020530Cucurbita moschata (Rifu)cmocuB431
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G875940Silver-seed gourdcarcuB0111
Csa3G875940Watermelon (97103) v2cuwmbB221
Csa3G875940Wax gourdcuwgoB340
Csa3G875940Cucurbita maxima (Rimu)cmacuB017
Csa3G875940Cucurbita moschata (Rifu)cmocuB008
Csa3G875940Watermelon (Charleston Gray)cuwcgB236
Csa3G875940Watermelon (97103) v1cuwmB250
Csa3G875940Bottle gourd (USVL1VR-Ls)culsiB192
Csa3G875940Cucumber (Gy14) v2cgybcuB110
Csa3G875940Melon (DHL92) v3.6.1cumedB208