Csa3G875440 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G875440
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Protein kinase, putative
Location	Chr3 : 36654432 .. 36654805 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTTGGATCTTTCAAACGCTTTTGTTTTGACTTCGTTTTCTGCGCTTCTTCTTTCTCCCATGGCTATGGACGATACTGAAAGCTGTAGTAGTAGACCGGTGGATGACTTCTCAGTTCAGACTTGGAGACAGAAGCAGAAGGTTGGTGTTTACGACGAAGTTCTTCGTCGACTCAGGCTGTCTCACGAAGCGGAGACCAGCCTTCCTGGTTTTGAGGATGAACTCTGGGCTCATTTTCATCGACTTCCTACTAGGTACGATACTTTCAACCTAGTTTTACTCCTTTTTCGCTTCTTTGCTTACTTGGAATCTGAATCCGTTCATCGTGTTTTCTCCGTCTTCTTGTATCGTTGTACACTGTCGCTTTAACGAC

mRNA sequence

ATGGCTATGGACGATACTGAAAGCTGTAGTAGTAGACCGGTGGATGACTTCTCAGTTCAGACTTGGAGACAGAAGCAGAAGGTTGGTGTTTACGACGAAGTTCTTCGTCGACTCAGGCTGTCTCACGAAGCGGAGACCAGCCTTCCTGGTTTTGAGGATGAACTCTGGGCTCATTTTCATCGACTTCCTACTAGGTACGATACTTTCAACCTAGTTTTACTCCTTTTTCGCTTCTTTGCTTACTTGGAATCTGAATCCGTTCATCGTGTTTTCTCCGTCTTCTTGTATCGTTGTACACTGTCGCTTTAA

Coding sequence (CDS)

ATGGCTATGGACGATACTGAAAGCTGTAGTAGTAGACCGGTGGATGACTTCTCAGTTCAGACTTGGAGACAGAAGCAGAAGGTTGGTGTTTACGACGAAGTTCTTCGTCGACTCAGGCTGTCTCACGAAGCGGAGACCAGCCTTCCTGGTTTTGAGGATGAACTCTGGGCTCATTTTCATCGACTTCCTACTAGGTACGATACTTTCAACCTAGTTTTACTCCTTTTTCGCTTCTTTGCTTACTTGGAATCTGAATCCGTTCATCGTGTTTTCTCCGTCTTCTTGTATCGTTGTACACTGTCGCTTTAA

Protein sequence

MAMDDTESCSSRPVDDFSVQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFHRLPTRYDTFNLVLLLFRFFAYLESESVHRVFSVFLYRCTLSL*

Homology

[Close]

BLAST of Csa3G875440 vs. Swiss-Prot
Match: STY46_ARATH (Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana GN=STY46 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.5e-12
Identity = 36/71 (50.70%), Postives = 45/71 (63.38%), Query Frame = 1


Query: 1  MAMDDTESCSSRPVDDF-----SVQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDEL 60
          M M+D ESC+SR + D      +    R++ K+ V+DEVLRRLR S   +  LPGFED+L
Sbjct: 1  MVMEDNESCASRVIFDALPTSQATMDRRERIKMEVFDEVLRRLRQSDIEDAHLPGFEDDL 60

Query: 61 WAHFHRLPTRY 67
          W HF+RLP RY
Sbjct: 61 WNHFNRLPARY 71

[Close]

BLAST of Csa3G875440 vs. Swiss-Prot
Match: STY8_ARATH (Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana GN=STY8 PE=1 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 4.4e-09
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 1


Query: 4  DDTESCSSRPVDDFSVQT--WRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFHR 63
          D++ESC SR V     Q      + K+ VY EVL+RL+ S+  E +LP FED+LW HF+R
Sbjct: 5  DESESCGSRAVVASPSQENPRHYRMKLDVYSEVLQRLQESNYEEATLPDFEDQLWLHFNR 64

Query: 64 LPTRY 67
          LP RY
Sbjct: 65 LPARY 69

[Close]

BLAST of Csa3G875440 vs. Swiss-Prot
Match: STY17_ARATH (Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana GN=STY17 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.4e-07
Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 1


Query: 7  ESCSSRPV-DDFSVQTWRQ-KQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFHRLPT 66
          ESC SR V    + ++ RQ + K+ VY EVL+R++ S+  E + PGF+D LW HF+RLP 
Sbjct: 9  ESCGSRAVVASITKESPRQHRMKLEVYGEVLQRIQESNYEEANFPGFDDLLWLHFNRLPA 68

[Close]

BLAST of Csa3G875440 vs. TrEMBL
Match: A0A0A0LGK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875440 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 3.8e-52
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1


Query: 1   MAMDDTESCSSRPVDDFSVQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH 60
           MAMDDTESCSSRPVDDFSVQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH
Sbjct: 1   MAMDDTESCSSRPVDDFSVQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH 60

Query: 61  RLPTRYDTFNLVLLLFRFFAYLESESVHRVFSVFLYRCTLSL 103
           RLPTRYDTFNLVLLLFRFFAYLESESVHRVFSVFLYRCTLSL
Sbjct: 61  RLPTRYDTFNLVLLLFRFFAYLESESVHRVFSVFLYRCTLSL 102

[Close]

BLAST of Csa3G875440 vs. TrEMBL
Match: W9QWV0_9ROSA (Serine/threonine-protein kinase HT1 OS=Morus notabilis GN=L484_006079 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.7e-15
Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = 1


Query: 1   MAMDDTESCSSRPVDDFS----VQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELW 60
           M MDD ESC SR  D  S    V+T +Q+QK+ VY+EVLRRL+ S+ +ET LPGF+DELW
Sbjct: 1   MVMDDNESCGSRMPDTTSSSSPVRTRQQRQKLEVYNEVLRRLKSSNNSETVLPGFDDELW 60

Query: 61  AHFHRLPTRYDTFNLVLLLFRFFAYLESESVHRVFSVFLYRCTLSL 103
           AHF+RLP RY      ++ F   +Y    +V R   V +++  L L
Sbjct: 61  AHFNRLPARY---LCPIVFFALLSYALDVNVERAEDVLMHKRLLHL 103

[Close]

BLAST of Csa3G875440 vs. TrEMBL
Match: M5XPX1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015548mg PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.9e-14
Identity = 42/66 (63.64%), Postives = 49/66 (74.24%), Query Frame = 1


Query: 1  MAMDDTESCSSRPVDDFSVQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH 60
          M + DTESC SRPVD     T +QK KV +Y+EVLRRL+ S  A+  L GFEDELWAHF+
Sbjct: 1  MGIFDTESCCSRPVDFSPTLTRKQKLKVNIYNEVLRRLKSSDVADAKLAGFEDELWAHFN 60

Query: 61 RLPTRY 67
          RLPTRY
Sbjct: 61 RLPTRY 66

[Close]

BLAST of Csa3G875440 vs. TrEMBL
Match: B9R8H0_RICCO (Protein kinase, putative OS=Ricinus communis GN=RCOM_1599780 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.1e-14
Identity = 41/64 (64.06%), Postives = 48/64 (75.00%), Query Frame = 1


Query: 3  MDDTESCSSRPVDDFSVQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFHRL 62
          M D ESCSSR VD    Q+ +Q+Q V VY+EVL RL+ S++  T LPGFEDELW HFHRL
Sbjct: 1  MGDAESCSSRAVDFVPSQSRKQRQTVDVYNEVLCRLKDSNDEATKLPGFEDELWTHFHRL 60

Query: 63 PTRY 67
          PTRY
Sbjct: 61 PTRY 64

[Close]

BLAST of Csa3G875440 vs. TrEMBL
Match: A0A067KYD6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08155 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.4e-14
Identity = 43/64 (67.19%), Postives = 49/64 (76.56%), Query Frame = 1


Query: 3  MDDTESCSSRPVDDFSVQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFHRL 62
          M DTESCSSR VD    Q+   +QKV VY++VLRRL+ S+E E  LPGFEDELWAHF RL
Sbjct: 1  MGDTESCSSRAVDFVPRQSRSWRQKVEVYNQVLRRLKDSNEEEALLPGFEDELWAHFCRL 60

Query: 63 PTRY 67
          PTRY
Sbjct: 61 PTRY 64

[Close]

BLAST of Csa3G875440 vs. TAIR10
Match: AT4G38470.1 (AT4G38470.1 ACT-like protein tyrosine kinase family protein)

HSP 1 Score: 71.6 bits (174), Expect = 3.1e-13
Identity = 36/71 (50.70%), Postives = 45/71 (63.38%), Query Frame = 1


Query: 1  MAMDDTESCSSRPVDDF-----SVQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDEL 60
          M M+D ESC+SR + D      +    R++ K+ V+DEVLRRLR S   +  LPGFED+L
Sbjct: 1  MVMEDNESCASRVIFDALPTSQATMDRRERIKMEVFDEVLRRLRQSDIEDAHLPGFEDDL 60

Query: 61 WAHFHRLPTRY 67
          W HF+RLP RY
Sbjct: 61 WNHFNRLPARY 71

[Close]

BLAST of Csa3G875440 vs. TAIR10
Match: AT2G17700.1 (AT2G17700.1 ACT-like protein tyrosine kinase family protein)

HSP 1 Score: 62.0 bits (149), Expect = 2.5e-10
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 1


Query: 4  DDTESCSSRPVDDFSVQT--WRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFHR 63
          D++ESC SR V     Q      + K+ VY EVL+RL+ S+  E +LP FED+LW HF+R
Sbjct: 5  DESESCGSRAVVASPSQENPRHYRMKLDVYSEVLQRLQESNYEEATLPDFEDQLWLHFNR 64

Query: 64 LPTRY 67
          LP RY
Sbjct: 65 LPARY 69

[Close]

BLAST of Csa3G875440 vs. TAIR10
Match: AT4G35780.1 (AT4G35780.1 ACT-like protein tyrosine kinase family protein)

HSP 1 Score: 57.0 bits (136), Expect = 8.0e-09
Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 1


Query: 7  ESCSSRPV-DDFSVQTWRQ-KQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFHRLPT 66
          ESC SR V    + ++ RQ + K+ VY EVL+R++ S+  E + PGF+D LW HF+RLP 
Sbjct: 9  ESCGSRAVVASITKESPRQHRMKLEVYGEVLQRIQESNYEEANFPGFDDLLWLHFNRLPA 68

[Close]

BLAST of Csa3G875440 vs. NCBI nr
Match: gi|700204936|gb|KGN60069.1| (hypothetical protein Csa_3G875440 [Cucumis sativus])

HSP 1 Score: 211.8 bits (538), Expect = 5.5e-52
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1


Query: 1   MAMDDTESCSSRPVDDFSVQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH 60
           MAMDDTESCSSRPVDDFSVQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH
Sbjct: 1   MAMDDTESCSSRPVDDFSVQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH 60

Query: 61  RLPTRYDTFNLVLLLFRFFAYLESESVHRVFSVFLYRCTLSL 103
           RLPTRYDTFNLVLLLFRFFAYLESESVHRVFSVFLYRCTLSL
Sbjct: 61  RLPTRYDTFNLVLLLFRFFAYLESESVHRVFSVFLYRCTLSL 102

[Close]

BLAST of Csa3G875440 vs. NCBI nr
Match: gi|659132907|ref|XP_008466449.1| (PREDICTED: ephrin type-B receptor 3-like isoform X3 [Cucumis melo])

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-29
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 1


Query: 1  MAMDDTESCSSRPVDDFSVQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH 60
          MAMDDTESCSSR VDDFS QTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH
Sbjct: 1  MAMDDTESCSSRAVDDFSAQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH 60

Query: 61 RLPTRY 67
          RLPTRY
Sbjct: 61 RLPTRY 66

[Close]

BLAST of Csa3G875440 vs. NCBI nr
Match: gi|659132903|ref|XP_008466447.1| (PREDICTED: tyrosine-protein kinase Abl-like isoform X2 [Cucumis melo])

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-29
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 1


Query: 1  MAMDDTESCSSRPVDDFSVQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH 60
          MAMDDTESCSSR VDDFS QTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH
Sbjct: 1  MAMDDTESCSSRAVDDFSAQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH 60

Query: 61 RLPTRY 67
          RLPTRY
Sbjct: 61 RLPTRY 66

[Close]

BLAST of Csa3G875440 vs. NCBI nr
Match: gi|659132900|ref|XP_008466446.1| (PREDICTED: tyrosine-protein kinase Abl-like isoform X1 [Cucumis melo])

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-29
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 1


Query: 1  MAMDDTESCSSRPVDDFSVQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH 60
          MAMDDTESCSSR VDDFS QTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH
Sbjct: 1  MAMDDTESCSSRAVDDFSAQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH 60

Query: 61 RLPTRY 67
          RLPTRY
Sbjct: 61 RLPTRY 66

[Close]

BLAST of Csa3G875440 vs. NCBI nr
Match: gi|659132909|ref|XP_008466450.1| (PREDICTED: serine/threonine-protein kinase HT1-like isoform X4 [Cucumis melo])

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-29
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 1


Query: 1  MAMDDTESCSSRPVDDFSVQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH 60
          MAMDDTESCSSR VDDFS QTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH
Sbjct: 1  MAMDDTESCSSRAVDDFSAQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFH 60

Query: 61 RLPTRY 67
          RLPTRY
Sbjct: 61 RLPTRY 66

The following BLAST results are available for this feature:

BLAST of Csa3G875440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
STY46_ARATH	5.5e-12	50.70	Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana GN=STY46 PE=1 SV=1	[more]
STY8_ARATH	4.4e-09	49.23	Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana GN=STY8 PE=1 SV=2	[more]
STY17_ARATH	1.4e-07	48.39	Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana GN=STY17 PE=1 SV=1	[more]

BLAST of Csa3G875440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGK6_CUCSA	3.8e-52	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875440 PE=4 SV=1	[more]
W9QWV0_9ROSA	1.7e-15	47.17	Serine/threonine-protein kinase HT1 OS=Morus notabilis GN=L484_006079 PE=4 SV=1	[more]
M5XPX1_PRUPE	1.9e-14	63.64	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015548mg PE=4 SV=1	[more]
B9R8H0_RICCO	4.1e-14	64.06	Protein kinase, putative OS=Ricinus communis GN=RCOM_1599780 PE=4 SV=1	[more]
A0A067KYD6_JATCU	5.4e-14	67.19	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08155 PE=4 SV=1	[more]

BLAST of Csa3G875440 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38470.1	3.1e-13	50.70	ACT-like protein tyrosine kinase family protein	[more]
AT2G17700.1	2.5e-10	49.23	ACT-like protein tyrosine kinase family protein	[more]
AT4G35780.1	8.0e-09	48.39	ACT-like protein tyrosine kinase family protein	[more]

BLAST of Csa3G875440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700204936\|gb\|KGN60069.1\|	5.5e-52	100.00	hypothetical protein Csa_3G875440 [Cucumis sativus]	[more]
gi\|659132907\|ref\|XP_008466449.1\|	1.7e-29	96.97	PREDICTED: ephrin type-B receptor 3-like isoform X3 [Cucumis melo]	[more]
gi\|659132903\|ref\|XP_008466447.1\|	1.7e-29	96.97	PREDICTED: tyrosine-protein kinase Abl-like isoform X2 [Cucumis melo]	[more]
gi\|659132900\|ref\|XP_008466446.1\|	1.7e-29	96.97	PREDICTED: tyrosine-protein kinase Abl-like isoform X1 [Cucumis melo]	[more]
gi\|659132909\|ref\|XP_008466450.1\|	1.7e-29	96.97	PREDICTED: serine/threonine-protein kinase HT1-like isoform X4 [Cucumis melo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043168	anion binding
molecular_function	GO:0004713	protein tyrosine kinase activity
molecular_function	GO:0036094	small molecule binding
molecular_function	GO:0016597	amino acid binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G875440.1	Csa3G875440.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G875440	Cla007418	Watermelon (97103) v1	cuwmB250
Csa3G875440	MELO3C003724	Melon (DHL92) v3.5.1	cumeB222
Csa3G875440	ClCG05G015380	Watermelon (Charleston Gray)	cuwcgB236
Csa3G875440	Lsi04G017820	Bottle gourd (USVL1VR-Ls)	culsiB192
Csa3G875440	MELO3C003722.2	Melon (DHL92) v3.6.1	cumedB208
Csa3G875440	Cla97C05G096430	Watermelon (97103) v2	cuwmbB221
Csa3G875440	Bhi09G001898	Wax gourd	cuwgoB340
Csa3G875440	CmaCh01G019920	Cucurbita maxima (Rimu)	cmacuB444
Csa3G875440	CmoCh01G020520	Cucurbita moschata (Rifu)	cmocuB431
Csa3G875440	Cp4.1LG02g08160	Cucurbita pepo (Zucchini)	cpecuB556
Csa3G875440	CsGy3G041230	Cucumber (Gy14) v2	cgybcuB110

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G875440	Silver-seed gourd	carcuB0111
Csa3G875440	Cucurbita maxima (Rimu)	cmacuB017
Csa3G875440	Cucurbita moschata (Rifu)	cmocuB008