Csa3G859670 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G859670
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	ST225
Location	Chr3 : 35947740 .. 35948900 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGTTTTAGATAAGATCGGAGCCAAAAGGAGATAAAGACACACTGCTCGCCAGACCCCAACTTTGTAATTCATTTTATATATATTGTTGCTTCTTCCTACTAGCAAACCATATCTCATTTACATATCTTTCGAATTAAGAAAAATAAAAAGTTTGGTATTTGAGTGATGGGTTCTTTAATGGCTGGTTGGGATTCCCCTACTACTGATCCCCAAGAAGGTAACTAATTAAATTCTGTTTCCATTTCAATTTTAAATTCATTACCTCTGAGGTTTTTTTTTTAATTTTATAATTTCTTTTTCGGTTTGTTAAAATTAATTTTTGGAATGGTTATCAGTGAGTCATCGGAGGAATAAGTCGTTGACAAAAGAGGAAATTGAAGCGTTTTGGAAAACGAAGAAACAAGTGCATGAAGAACATCTGAGAGCAATTTTAAGTCCATTTGAGACATTGGAGGTATATAAAGATTGGGAGTTTTAATTTCTTCATCTTTAATTCTTTTTGGATTTCAATTATAAATTAACTAACTATGGAGCTATGTGAATATGGCAGGAAAAAGAAAAGGGAAATATTGGAAATAATCTACAGAGATCAGCGTCTATGCCTCCATTCAATACAAGGAAGGGTTTACGGGAGAATATGAAATCTGAAACTAACTTAGAAAAGCCCGAGAAAAATCCCTGGTAATTAATTATGTGTCTATATATATATATATACATATACTAAAATGAATGAAAATGATCTAAATAAGAAAAATATAACAAAAGTTGACATTGTAAGTTGAAATTTAACAGGTGGAGAAGAAGTAACTGGGCGTTTCTAAACGAACCACCGGAGACAGAAGGGTCCGGTAACAGCTACGTGTCGCAGTTCCACGTCGCAAACATGGCGGCTTCCAGACTTGGTCGTGGTGGCGTTAGTGCTTAAGCAGCGATGCTACTTTTTTTAATCTTTCGTTGCGTCGGTGACGGAGTCGGAGTGGGTGGGGATGTGATTGTAAATGAAGAAAAAACAAAATTAAAAGGTTTGGTTGTAAAGTTATATTAGAATTTTTATGAATTTCAGTGGACGGTTTGTAAATTATTATGGGTATTTTCTTCTAAATTAGAGTGTGTATTTTGGTTGGATTTGAAGGGGGTGTGTGTGAGTGTTTGATGTATA

mRNA sequence

ATGGGTTCTTTAATGGCTGGTTGGGATTCCCCTACTACTGATCCCCAAGAAGTGAGTCATCGGAGGAATAAGTCGTTGACAAAAGAGGAAATTGAAGCGTTTTGGAAAACGAAGAAACAAGTGCATGAAGAACATCTGAGAGCAATTTTAAGTCCATTTGAGACATTGGAGGAAAAAGAAAAGGGAAATATTGGAAATAATCTACAGAGATCAGCGTCTATGCCTCCATTCAATACAAGGAAGGGTTTACGGGAGAATATGAAATCTGAAACTAACTTAGAAAAGCCCGAGAAAAATCCCTGGTGGAGAAGAAGTAACTGGGCGTTTCTAAACGAACCACCGGAGACAGAAGGGTCCGGTAACAGCTACGTGTCGCAGTTCCACGTCGCAAACATGGCGGCTTCCAGACTTGGTCGTGGTGGCGTTAGTGCTTAA

Coding sequence (CDS)

ATGGGTTCTTTAATGGCTGGTTGGGATTCCCCTACTACTGATCCCCAAGAAGTGAGTCATCGGAGGAATAAGTCGTTGACAAAAGAGGAAATTGAAGCGTTTTGGAAAACGAAGAAACAAGTGCATGAAGAACATCTGAGAGCAATTTTAAGTCCATTTGAGACATTGGAGGAAAAAGAAAAGGGAAATATTGGAAATAATCTACAGAGATCAGCGTCTATGCCTCCATTCAATACAAGGAAGGGTTTACGGGAGAATATGAAATCTGAAACTAACTTAGAAAAGCCCGAGAAAAATCCCTGGTGGAGAAGAAGTAACTGGGCGTTTCTAAACGAACCACCGGAGACAGAAGGGTCCGGTAACAGCTACGTGTCGCAGTTCCACGTCGCAAACATGGCGGCTTCCAGACTTGGTCGTGGTGGCGTTAGTGCTTAA

Protein sequence

MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA*

Homology

[Close]

BLAST of Csa3G859670 vs. TrEMBL
Match: A0A0A0LDC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G859670 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 6.7e-79
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1


Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60
           MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE
Sbjct: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60

Query: 61  KGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG 120
           KGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG
Sbjct: 61  KGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG 120

Query: 121 NSYVSQFHVANMAASRLGRGGVSA 145
           NSYVSQFHVANMAASRLGRGGVSA
Sbjct: 121 NSYVSQFHVANMAASRLGRGGVSA 144

[Close]

BLAST of Csa3G859670 vs. TrEMBL
Match: A0A067KU58_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04448 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.6e-35
Identity = 79/146 (54.11%), Postives = 106/146 (72.60%), Query Frame = 1


Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPF-ETLEEK 60
           MGSLMAGWDSP  DP+ V +++N S TKEEIEA+WK+KK++ EEHL+AI SP  E   + 
Sbjct: 1   MGSLMAGWDSPVPDPKSVKYKKNWSFTKEEIEAYWKSKKKIEEEHLKAISSPSGERTHQD 60

Query: 61  EKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEK-PEKNPWWRRSNWAFLNEPPETEG 120
           +K   G  +QRS+S+P   T++GL + M++E +LE+  +KN WW RSNWAFLNEPP  E 
Sbjct: 61  DK--FGMKIQRSSSLPGTKTKEGLID-METEKSLEEFIKKNGWWTRSNWAFLNEPPVLEN 120

Query: 121 SGNSYVSQFHVANMAASRLGRGGVSA 145
           S  +YV QFH+AN+A S+    G+SA
Sbjct: 121 SSYNYVPQFHIANLATSKDNNTGISA 143

[Close]

BLAST of Csa3G859670 vs. TrEMBL
Match: A0A0D2TSU6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G200900 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 8.6e-34
Identity = 78/148 (52.70%), Postives = 106/148 (71.62%), Query Frame = 1


Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60
           MGSLMAGWDSP +  +  + +RN+SLTKEEIEA+WK+KK+  E+HL+AI SP ++  + E
Sbjct: 1   MGSLMAGWDSPVSASKSATIQRNRSLTKEEIEAYWKSKKKTEEDHLKAIYSPSDSSNQLE 60

Query: 61  --KGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEK-PEKNPWWRRSNWAFLNEPPETE 120
                 G ++ RS+SMP  +T +G   +M +ET+LE   +KN WW RSNWAFLNEP   +
Sbjct: 61  IPSQGYGRSIMRSSSMPSPHTEQGFL-HMDAETSLEDIVKKNGWWTRSNWAFLNEPSVLD 120

Query: 121 GSGNSYVSQFHVANMAASRLGRG-GVSA 145
           G  NSY SQFH+AN+AAS+L +  G+SA
Sbjct: 121 GPTNSYTSQFHIANLAASKLNKDRGISA 147

[Close]

BLAST of Csa3G859670 vs. TrEMBL
Match: A0A061FCM9_THECC (DNA polymerase epsilon catalytic subunit A, putative OS=Theobroma cacao GN=TCM_034068 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-32
Identity = 76/147 (51.70%), Postives = 102/147 (69.39%), Query Frame = 1


Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60
           MGSLM+GWDSP +DP+ V  +RN+SLTKEEI+A+W++KK+  EEHL+AI S  ++  + E
Sbjct: 1   MGSLMSGWDSPVSDPKSVIRKRNRSLTKEEIDAYWRSKKKTEEEHLKAISSASDSCSQLE 60

Query: 61  --KGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEK-PEKNPWWRRSNWAFLNEPPETE 120
                 G    RS+SMP  NT++   +   +ET+LE   +KN WW RSNWAFLNEPP  E
Sbjct: 61  IPFEKYGRQYMRSSSMPLPNTKQSFLDT-DTETSLENIIKKNGWWTRSNWAFLNEPPVLE 120

Query: 121 GSGNSYVSQFHVANMAASRLG-RGGVS 144
              NSY SQ+H+AN+AAS+L    G+S
Sbjct: 121 RPTNSYTSQYHIANLAASKLNTNAGIS 146

[Close]

BLAST of Csa3G859670 vs. TrEMBL
Match: A0A067H106_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031889mg PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.0e-31
Identity = 73/139 (52.52%), Postives = 99/139 (71.22%), Query Frame = 1


Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60
           MGSLMAGWDSPT+DP+    +RN+SLTK+EIEA+W+ KK+  EEHL+A+ SP ++++++E
Sbjct: 1   MGSLMAGWDSPTSDPKLQKIKRNQSLTKDEIEAYWRAKKKTEEEHLKAVSSPSDSVQKQE 60

Query: 61  KGNIGNN---LQRSASMPPFNTRKGLRENMKSETNLEK-PEKNPWWRRSNWAFLNEPPET 120
                 +    QRS S+P  +T+ GL E +  ET+LEK  +K  WW RS  AFLNEPP  
Sbjct: 61  ISTNKESEIKYQRSTSLPMASTKTGLME-VDEETSLEKFIKKQGWWTRSTSAFLNEPPVL 120

Query: 121 EGSGNSYVSQFHVANMAAS 136
           EG   SY +QFHVAN+AA+
Sbjct: 121 EGGSKSYAAQFHVANLAAA 138

[Close]

BLAST of Csa3G859670 vs. TAIR10
Match: AT1G19530.1 (AT1G19530.1 unknown protein)

HSP 1 Score: 96.7 bits (239), Expect = 1.3e-20
Identity = 60/134 (44.78%), Postives = 74/134 (55.22%), Query Frame = 1


Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQ-VHEEHLRAILSPFETLEEK 60
           MGSLM+GWDS   DP+ V  RR KSLT+EEI+ FWKTKK+   EEH++A    F  L  +
Sbjct: 1   MGSLMSGWDSRVRDPKSV--RRCKSLTREEIDTFWKTKKKNEEEEHVQA----FSKLVTQ 60

Query: 61  EKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNPWWRRSNWAFLNEPPETEGS 120
           E        ++S           L EN    +         WWR++ WAFLNEP E EG 
Sbjct: 61  EGAQSQAKEKKSVD--------DLFENQSKSSG--------WWRKTYWAFLNEPREEEGR 112

Query: 121 GNSYVSQFHVANMA 134
            N+YVSQF VA++A
Sbjct: 121 PNNYVSQFKVAHIA 112

[Close]

BLAST of Csa3G859670 vs. NCBI nr
Match: gi|449460255|ref|XP_004147861.1| (PREDICTED: uncharacterized protein LOC101222738 [Cucumis sativus])

HSP 1 Score: 301.2 bits (770), Expect = 9.7e-79
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1


Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60
           MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE
Sbjct: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60

Query: 61  KGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG 120
           KGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG
Sbjct: 61  KGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG 120

Query: 121 NSYVSQFHVANMAASRLGRGGVSA 145
           NSYVSQFHVANMAASRLGRGGVSA
Sbjct: 121 NSYVSQFHVANMAASRLGRGGVSA 144

[Close]

BLAST of Csa3G859670 vs. NCBI nr
Match: gi|659133083|ref|XP_008466545.1| (PREDICTED: uncharacterized protein LOC103503930 [Cucumis melo])

HSP 1 Score: 293.5 bits (750), Expect = 2.0e-76
Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 1


Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60
           MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE
Sbjct: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60

Query: 61  KGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG 120
           K N+GNNLQRSASMPPFNTRKGL EN+KSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG
Sbjct: 61  KENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG 120

Query: 121 NSYVSQFHVANMAASRLGRGGVSA 145
           NSYVSQFHVANMAASRLGRGGVSA
Sbjct: 121 NSYVSQFHVANMAASRLGRGGVSA 144

[Close]

BLAST of Csa3G859670 vs. NCBI nr
Match: gi|802594085|ref|XP_012071887.1| (PREDICTED: uncharacterized protein LOC105633812 [Jatropha curcas])

HSP 1 Score: 155.6 bits (392), Expect = 6.6e-35
Identity = 79/146 (54.11%), Postives = 106/146 (72.60%), Query Frame = 1


Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPF-ETLEEK 60
           MGSLMAGWDSP  DP+ V +++N S TKEEIEA+WK+KK++ EEHL+AI SP  E   + 
Sbjct: 1   MGSLMAGWDSPVPDPKSVKYKKNWSFTKEEIEAYWKSKKKIEEEHLKAISSPSGERTHQD 60

Query: 61  EKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEK-PEKNPWWRRSNWAFLNEPPETEG 120
           +K   G  +QRS+S+P   T++GL + M++E +LE+  +KN WW RSNWAFLNEPP  E 
Sbjct: 61  DK--FGMKIQRSSSLPGTKTKEGLID-METEKSLEEFIKKNGWWTRSNWAFLNEPPVLEN 120

Query: 121 SGNSYVSQFHVANMAASRLGRGGVSA 145
           S  +YV QFH+AN+A S+    G+SA
Sbjct: 121 SSYNYVPQFHIANLATSKDNNTGISA 143

[Close]

BLAST of Csa3G859670 vs. NCBI nr
Match: gi|823219734|ref|XP_012442584.1| (PREDICTED: uncharacterized protein LOC105767563 isoform X1 [Gossypium raimondii])

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-33
Identity = 78/148 (52.70%), Postives = 106/148 (71.62%), Query Frame = 1


Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60
           MGSLMAGWDSP +  +  + +RN+SLTKEEIEA+WK+KK+  E+HL+AI SP ++  + E
Sbjct: 1   MGSLMAGWDSPVSASKSATIQRNRSLTKEEIEAYWKSKKKTEEDHLKAIYSPSDSSNQLE 60

Query: 61  --KGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEK-PEKNPWWRRSNWAFLNEPPETE 120
                 G ++ RS+SMP  +T +G   +M +ET+LE   +KN WW RSNWAFLNEP   +
Sbjct: 61  IPSQGYGRSIMRSSSMPSPHTEQGFL-HMDAETSLEDIVKKNGWWTRSNWAFLNEPSVLD 120

Query: 121 GSGNSYVSQFHVANMAASRLGRG-GVSA 145
           G  NSY SQFH+AN+AAS+L +  G+SA
Sbjct: 121 GPTNSYTSQFHIANLAASKLNKDRGISA 147

[Close]

BLAST of Csa3G859670 vs. NCBI nr
Match: gi|823219736|ref|XP_012442585.1| (PREDICTED: uncharacterized protein LOC105767563 isoform X2 [Gossypium raimondii])

HSP 1 Score: 149.8 bits (377), Expect = 3.6e-33
Identity = 77/146 (52.74%), Postives = 105/146 (71.92%), Query Frame = 1


Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60
           MGSLMAGWDSP +  +  + +RN+SLTKEEIEA+WK+KK+  E+HL+AI SP ++  +  
Sbjct: 1   MGSLMAGWDSPVSASKSATIQRNRSLTKEEIEAYWKSKKKTEEDHLKAIYSPSDSSNQL- 60

Query: 61  KGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEK-PEKNPWWRRSNWAFLNEPPETEGS 120
               G ++ RS+SMP  +T +G   +M +ET+LE   +KN WW RSNWAFLNEP   +G 
Sbjct: 61  --GYGRSIMRSSSMPSPHTEQGFL-HMDAETSLEDIVKKNGWWTRSNWAFLNEPSVLDGP 120

Query: 121 GNSYVSQFHVANMAASRLGRG-GVSA 145
            NSY SQFH+AN+AAS+L +  G+SA
Sbjct: 121 TNSYTSQFHIANLAASKLNKDRGISA 142

The following BLAST results are available for this feature:

BLAST of Csa3G859670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDC2_CUCSA	6.7e-79	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G859670 PE=4 SV=1	[more]
A0A067KU58_JATCU	4.6e-35	54.11	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04448 PE=4 SV=1	[more]
A0A0D2TSU6_GOSRA	8.6e-34	52.70	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G200900 PE=4 SV=1	[more]
A0A061FCM9_THECC	1.2e-32	51.70	DNA polymerase epsilon catalytic subunit A, putative OS=Theobroma cacao GN=TCM_0...	[more]
A0A067H106_CITSI	4.0e-31	52.52	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031889mg PE=4 SV=1	[more]

BLAST of Csa3G859670 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G19530.1	1.3e-20	44.78	unknown protein	[more]

BLAST of Csa3G859670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449460255\|ref\|XP_004147861.1\|	9.7e-79	100.00	PREDICTED: uncharacterized protein LOC101222738 [Cucumis sativus]	[more]
gi\|659133083\|ref\|XP_008466545.1\|	2.0e-76	97.22	PREDICTED: uncharacterized protein LOC103503930 [Cucumis melo]	[more]
gi\|802594085\|ref\|XP_012071887.1\|	6.6e-35	54.11	PREDICTED: uncharacterized protein LOC105633812 [Jatropha curcas]	[more]
gi\|823219734\|ref\|XP_012442584.1\|	1.2e-33	52.70	PREDICTED: uncharacterized protein LOC105767563 isoform X1 [Gossypium raimondii]	[more]
gi\|823219736\|ref\|XP_012442585.1\|	3.6e-33	52.74	PREDICTED: uncharacterized protein LOC105767563 isoform X2 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0042545	cell wall modification
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005618	cell wall
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0030599	pectinesterase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU102817	cucumber EST collection version 3.0	transcribed_cluster
CU120459	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G859670.1	Csa3G859670.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU102817	CU102817	transcribed_cluster
CU120459	CU120459	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33872	FAMILY NOT NAMED	coord: 2..144 score: 1.8
None	No IPR available	PANTHER	PTHR33872:SF2	SUBFAMILY NOT NAMED	coord: 2..144 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G859670	Cla020779	Watermelon (97103) v1	cuwmB244
Csa3G859670	Cla022483	Watermelon (97103) v1	cuwmB210
Csa3G859670	MELO3C003817	Melon (DHL92) v3.5.1	cumeB222
Csa3G859670	MELO3C010952	Melon (DHL92) v3.5.1	cumeB203
Csa3G859670	ClCG08G014950	Watermelon (Charleston Gray)	cuwcgB263
Csa3G859670	ClCG05G018840	Watermelon (Charleston Gray)	cuwcgB231
Csa3G859670	Lsi08G013860	Bottle gourd (USVL1VR-Ls)	culsiB240
Csa3G859670	Lsi04G016870	Bottle gourd (USVL1VR-Ls)	culsiB192
Csa3G859670	MELO3C003817.2	Melon (DHL92) v3.6.1	cumedB208
Csa3G859670	MELO3C010952.2	Melon (DHL92) v3.6.1	cumedB189
Csa3G859670	Cla97C05G100220	Watermelon (97103) v2	cuwmbB216
Csa3G859670	Cla97C08G158530	Watermelon (97103) v2	cuwmbB248
Csa3G859670	Bhi04G000159	Wax gourd	cuwgoB313
Csa3G859670	Bhi09G001849	Wax gourd	cuwgoB342
Csa3G859670	CSPI03G42870	Wild cucumber (PI 183967)	cpicuB120
Csa3G859670	CSPI02G20160	Wild cucumber (PI 183967)	cpicuB070
Csa3G859670	Cucsa.232070	Cucumber (Gy14) v1	cgycuB327
Csa3G859670	Cucsa.342530	Cucumber (Gy14) v1	cgycuB478
Csa3G859670	CmaCh12G004640	Cucurbita maxima (Rimu)	cmacuB183
Csa3G859670	CmaCh01G019170	Cucurbita maxima (Rimu)	cmacuB444
Csa3G859670	CmoCh12G004130	Cucurbita moschata (Rifu)	cmocuB167
Csa3G859670	CmoCh01G019800	Cucurbita moschata (Rifu)	cmocuB431
Csa3G859670	Cp4.1LG07g04040	Cucurbita pepo (Zucchini)	cpecuB828
Csa3G859670	Cp4.1LG02g07470	Cucurbita pepo (Zucchini)	cpecuB556
Csa3G859670	CsGy2G019930	Cucumber (Gy14) v2	cgybcuB066
Csa3G859670	CsGy3G040430	Cucumber (Gy14) v2	cgybcuB110
Csa3G859670	Carg04045	Silver-seed gourd	carcuB0992
Csa3G859670	Carg17153	Silver-seed gourd	carcuB0961

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Csa3G859670	Csa2G361750	Cucumber (Chinese Long) v2	cucuB051

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G859670	Cucurbita pepo (Zucchini)	cpecuB065
Csa3G859670	Cucurbita pepo (Zucchini)	cpecuB110
Csa3G859670	Cucurbita pepo (Zucchini)	cpecuB481
Csa3G859670	Cucurbita pepo (Zucchini)	cpecuB779
Csa3G859670	Bottle gourd (USVL1VR-Ls)	culsiB171
Csa3G859670	Bottle gourd (USVL1VR-Ls)	culsiB237
Csa3G859670	Cucumber (Gy14) v2	cgybcuB257
Csa3G859670	Melon (DHL92) v3.6.1	cumedB247
Csa3G859670	Silver-seed gourd	carcuB0111
Csa3G859670	Silver-seed gourd	carcuB0203
Csa3G859670	Silver-seed gourd	carcuB0438
Csa3G859670	Silver-seed gourd	carcuB0775
Csa3G859670	Watermelon (97103) v2	cuwmbB172
Csa3G859670	Watermelon (97103) v2	cuwmbB238
Csa3G859670	Wax gourd	cuwgoB327
Csa3G859670	Cucumber (Chinese Long) v2	cucuB094
Csa3G859670	Cucumber (Chinese Long) v2	cucuB112
Csa3G859670	Cucumber (Gy14) v1	cgycuB174
Csa3G859670	Cucurbita maxima (Rimu)	cmacuB017
Csa3G859670	Cucurbita maxima (Rimu)	cmacuB661
Csa3G859670	Cucurbita maxima (Rimu)	cmacuB795
Csa3G859670	Cucurbita maxima (Rimu)	cmacuB858
Csa3G859670	Cucurbita moschata (Rifu)	cmocuB008
Csa3G859670	Cucurbita moschata (Rifu)	cmocuB650
Csa3G859670	Cucurbita moschata (Rifu)	cmocuB788
Csa3G859670	Cucurbita moschata (Rifu)	cmocuB845
Csa3G859670	Melon (DHL92) v3.5.1	cumeB258
Csa3G859670	Watermelon (Charleston Gray)	cuwcgB203
Csa3G859670	Watermelon (97103) v1	cuwmB225
Csa3G859670	Watermelon (97103) v1	cuwmB257
Csa3G859670	Watermelon (97103) v1	cuwmB273