Csa3G848880 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G848880
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Kinase family protein
Location	Chr3 : 34788217 .. 34788441 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCGGGATCTGAAGCGAGGAAAGCAGGACAAAGGTTCTGATGATGTCCAGAAGGTGATTGTCGCAGTGAAGGCTTCCAAAGAAATTCCTAAAACTGCACTGGTTTGGGCGTTGACTCATGTTGTTCAAATTGGAGATTGCATAACTCTGTTGGTTGTTGTCCCTTCTCAAAGCTCTGGTACATTTCTCCCTTTCCCTCATTTTGATTTATGCAAATGCTAG

mRNA sequence

ATGAGTCGGGATCTGAAGCGAGGAAAGCAGGACAAAGGTTCTGATGATGTCCAGAAGGTGATTGTCGCAGTGAAGGCTTCCAAAGAAATTCCTAAAACTGCACTGGTTTGGGCGTTGACTCATGTTGTTCAAATTGGAGATTGCATAACTCTGTTGGTTGTTGTCCCTTCTCAAAGCTCTGGTACATTTCTCCCTTTCCCTCATTTTGATTTATGCAAATGCTAG

Coding sequence (CDS)

ATGAGTCGGGATCTGAAGCGAGGAAAGCAGGACAAAGGTTCTGATGATGTCCAGAAGGTGATTGTCGCAGTGAAGGCTTCCAAAGAAATTCCTAAAACTGCACTGGTTTGGGCGTTGACTCATGTTGTTCAAATTGGAGATTGCATAACTCTGTTGGTTGTTGTCCCTTCTCAAAGCTCTGGTACATTTCTCCCTTTCCCTCATTTTGATTTATGCAAATGCTAG

Protein sequence

MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSSGTFLPFPHFDLCKC*

Homology

[Close]

BLAST of Csa3G848880 vs. TrEMBL
Match: A0A0A0LCU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848880 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.0e-34
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1


Query: 1  MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSS 60
          MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSS
Sbjct: 1  MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSS 60

Query: 61 GTFLPFPHFDLCKC 75
          GTFLPFPHFDLCKC
Sbjct: 61 GTFLPFPHFDLCKC 74

[Close]

BLAST of Csa3G848880 vs. TrEMBL
Match: M5XAT9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001766mg PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.3e-21
Identity = 56/70 (80.00%), Postives = 61/70 (87.14%), Query Frame = 1


Query: 1  MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSS 60
          MSR+ KR +Q+KGSDD +KV+VAVKASKEIPKTALVWALTHVVQ GDCITLLVVVPSQSS
Sbjct: 6  MSREQKRVRQEKGSDDAEKVVVAVKASKEIPKTALVWALTHVVQPGDCITLLVVVPSQSS 65

Query: 61 G-TFLPFPHF 70
          G  F  FP F
Sbjct: 66 GRKFWGFPRF 75

[Close]

BLAST of Csa3G848880 vs. TrEMBL
Match: A0A151SHT2_CAJCA (Putative serine/threonine-protein kinase RLCKVII OS=Cajanus cajan GN=KK1_000538 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.8e-20
Identity = 56/70 (80.00%), Postives = 60/70 (85.71%), Query Frame = 1


Query: 1  MSRDL-KRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQS 60
          MSR+  KRGKQ+KGSD  +KVIVAVKASKEIPKTALVW+LTHVVQ GDCITLLVVVPSQS
Sbjct: 1  MSREQQKRGKQEKGSDAAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQS 60

Query: 61 SGTFLPFPHF 70
          SG    FP F
Sbjct: 61 SGRRWGFPRF 70

[Close]

BLAST of Csa3G848880 vs. TrEMBL
Match: A0A0S3SZW6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G206200 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.1e-19
Identity = 57/71 (80.28%), Postives = 61/71 (85.92%), Query Frame = 1


Query: 1  MSRDL-KRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQS 60
          MSR+  KRGKQ+KGSD  +KVIVAVKASKEIPKTALVW+LTHVVQ GDCITLLVVVPSQS
Sbjct: 1  MSREQQKRGKQEKGSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQS 60

Query: 61 SGTFL-PFPHF 70
          SG  L  FP F
Sbjct: 61 SGRRLWGFPRF 71

[Close]

BLAST of Csa3G848880 vs. TrEMBL
Match: A0A0L9TJA9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan1082s000100 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.1e-19
Identity = 57/71 (80.28%), Postives = 61/71 (85.92%), Query Frame = 1


Query: 1  MSRDL-KRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQS 60
          MSR+  KRGKQ+KGSD  +KVIVAVKASKEIPKTALVW+LTHVVQ GDCITLLVVVPSQS
Sbjct: 1  MSREQQKRGKQEKGSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQS 60

Query: 61 SGTFL-PFPHF 70
          SG  L  FP F
Sbjct: 61 SGRRLWGFPRF 71

[Close]

BLAST of Csa3G848880 vs. TAIR10
Match: AT3G13690.1 (AT3G13690.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain)

HSP 1 Score: 92.8 bits (229), Expect = 9.5e-20
Identity = 49/63 (77.78%), Postives = 52/63 (82.54%), Query Frame = 1


Query: 1  MSRDLKRGKQDKG--SDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQ 60
          MSR  KRGKQ+K   SD  QKVIVAVKAS+EIPKTAL+WALTHVVQ GDCITL+VVVPS 
Sbjct: 1  MSRLQKRGKQEKPVVSDGAQKVIVAVKASREIPKTALIWALTHVVQPGDCITLIVVVPSH 60

Query: 61 SSG 62
          +SG
Sbjct: 61 NSG 63

[Close]

BLAST of Csa3G848880 vs. TAIR10
Match: AT1G55200.1 (AT1G55200.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain)

HSP 1 Score: 76.3 bits (186), Expect = 9.2e-15
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 1


Query: 1  MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSS 60
          MSR+ K+GK+  GS+  +KV+VAVKAS+EI KTA VWALTH+V  GDCITL+VVV S ++
Sbjct: 1  MSRE-KQGKRS-GSNGTEKVLVAVKASREISKTAFVWALTHIVHPGDCITLIVVVTSYNA 60

Query: 61 GTFL-PFPHF 70
          G  L  FP F
Sbjct: 61 GRKLWTFPRF 68

[Close]

BLAST of Csa3G848880 vs. TAIR10
Match: AT5G56790.1 (AT5G56790.1 Protein kinase superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 3.6e-11
Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 1


Query: 6  KRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPS 58
          ++G +++G    +KV+VAV+ASKEIPK AL+W LTHVVQ GD I LLVVVPS
Sbjct: 3  QKGFKERGVVVGKKVMVAVRASKEIPKAALLWTLTHVVQPGDRIRLLVVVPS 54

[Close]

BLAST of Csa3G848880 vs. NCBI nr
Match: gi|700204697|gb|KGN59830.1| (hypothetical protein Csa_3G848880 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 2.9e-34
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1


Query: 1  MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSS 60
          MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSS
Sbjct: 1  MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSS 60

Query: 61 GTFLPFPHFDLCKC 75
          GTFLPFPHFDLCKC
Sbjct: 61 GTFLPFPHFDLCKC 74

[Close]

BLAST of Csa3G848880 vs. NCBI nr
Match: gi|449458185|ref|XP_004146828.1| (PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-25
Identity = 65/70 (92.86%), Postives = 65/70 (92.86%), Query Frame = 1


Query: 1  MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSS 60
          MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSS
Sbjct: 1  MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSS 60

Query: 61 G-TFLPFPHF 70
          G  F  FP F
Sbjct: 61 GRKFWGFPRF 70

[Close]

BLAST of Csa3G848880 vs. NCBI nr
Match: gi|659093565|ref|XP_008447596.1| (PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Cucumis melo])

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-25
Identity = 65/70 (92.86%), Postives = 65/70 (92.86%), Query Frame = 1


Query: 1  MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSS 60
          MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSS
Sbjct: 1  MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSS 60

Query: 61 G-TFLPFPHF 70
          G  F  FP F
Sbjct: 61 GRKFWGFPRF 70

[Close]

BLAST of Csa3G848880 vs. NCBI nr
Match: gi|694383139|ref|XP_009367540.1| (PREDICTED: inactive protein kinase SELMODRAFT_444075 isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 111.3 bits (277), Expect = 7.3e-22
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 1


Query: 1  MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSS 60
          MSR+ KRGKQ+KGSDD +KV+VAVKASKE+PKTALVWALTHVVQ GDCITLLVVVPSQSS
Sbjct: 1  MSREQKRGKQEKGSDDAEKVVVAVKASKEVPKTALVWALTHVVQPGDCITLLVVVPSQSS 60

Query: 61 GTFL-PFPHF 70
          G  L  FP F
Sbjct: 61 GKKLWGFPRF 70

[Close]

BLAST of Csa3G848880 vs. NCBI nr
Match: gi|657997850|ref|XP_008391311.1| (PREDICTED: inactive protein kinase SELMODRAFT_444075-like isoform X1 [Malus domestica])

HSP 1 Score: 111.3 bits (277), Expect = 7.3e-22
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 1


Query: 1  MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSS 60
          MSR+ KRGKQ+KGSDD +KV+VAVKASKE+PKTALVWALTHVVQ GDCITLLVVVPSQSS
Sbjct: 1  MSREQKRGKQEKGSDDAEKVVVAVKASKEVPKTALVWALTHVVQPGDCITLLVVVPSQSS 60

Query: 61 GTFL-PFPHF 70
          G  L  FP F
Sbjct: 61 GKKLWGFPRF 70

The following BLAST results are available for this feature:

BLAST of Csa3G848880 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCU1_CUCSA	2.0e-34	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848880 PE=4 SV=1	[more]
M5XAT9_PRUPE	4.3e-21	80.00	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001766mg PE=4 SV=1	[more]
A0A151SHT2_CAJCA	2.8e-20	80.00	Putative serine/threonine-protein kinase RLCKVII OS=Cajanus cajan GN=KK1_000538 ...	[more]
A0A0S3SZW6_PHAAN	1.1e-19	80.28	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G206200 PE=...	[more]
A0A0L9TJA9_PHAAN	1.1e-19	80.28	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan1082s000100 PE=4 SV=...	[more]

BLAST of Csa3G848880 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G13690.1	9.5e-20	77.78	Protein kinase protein with adenine nucleotide alpha hydrolases-like...	[more]
AT1G55200.1	9.2e-15	61.43	Protein kinase protein with adenine nucleotide alpha hydrolases-like...	[more]
AT5G56790.1	3.6e-11	63.46	Protein kinase superfamily protein	[more]

BLAST of Csa3G848880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700204697\|gb\|KGN59830.1\|	2.9e-34	100.00	hypothetical protein Csa_3G848880 [Cucumis sativus]	[more]
gi\|449458185\|ref\|XP_004146828.1\|	1.1e-25	92.86	PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Cucumis sativus]	[more]
gi\|659093565\|ref\|XP_008447596.1\|	1.1e-25	92.86	PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Cucumis melo]	[more]
gi\|694383139\|ref\|XP_009367540.1\|	7.3e-22	81.43	PREDICTED: inactive protein kinase SELMODRAFT_444075 isoform X1 [Pyrus x bretsch...	[more]
gi\|657997850\|ref\|XP_008391311.1\|	7.3e-22	81.43	PREDICTED: inactive protein kinase SELMODRAFT_444075-like isoform X1 [Malus dome...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018108	peptidyl-tyrosine phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004715	non-membrane spanning protein tyrosine kinase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU111987	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G848880.1	Csa3G848880.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU111987	CU111987	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G848880	Cucurbita pepo (Zucchini)	cpecuB136
Csa3G848880	Cucurbita pepo (Zucchini)	cpecuB308
Csa3G848880	Cucurbita pepo (Zucchini)	cpecuB558
Csa3G848880	Cucurbita pepo (Zucchini)	cpecuB602
Csa3G848880	Bottle gourd (USVL1VR-Ls)	culsiB174
Csa3G848880	Bottle gourd (USVL1VR-Ls)	culsiB234
Csa3G848880	Cucumber (Gy14) v2	cgybcuB110
Csa3G848880	Cucumber (Gy14) v2	cgybcuB306
Csa3G848880	Melon (DHL92) v3.6.1	cumedB176
Csa3G848880	Melon (DHL92) v3.6.1	cumedB213
Csa3G848880	Silver-seed gourd	carcuB0124
Csa3G848880	Silver-seed gourd	carcuB0222
Csa3G848880	Silver-seed gourd	carcuB1037
Csa3G848880	Watermelon (97103) v2	cuwmbB240
Csa3G848880	Watermelon (97103) v2	cuwmbB258
Csa3G848880	Wax gourd	cuwgoB275
Csa3G848880	Wax gourd	cuwgoB344
Csa3G848880	Cucumber (Chinese Long) v2	cucuB128
Csa3G848880	Cucumber (Gy14) v1	cgycuB478
Csa3G848880	Cucumber (Gy14) v1	cgycuB504
Csa3G848880	Cucurbita maxima (Rimu)	cmacuB244
Csa3G848880	Cucurbita maxima (Rimu)	cmacuB358
Csa3G848880	Cucurbita maxima (Rimu)	cmacuB446
Csa3G848880	Cucurbita maxima (Rimu)	cmacuB891
Csa3G848880	Cucurbita moschata (Rifu)	cmocuB231
Csa3G848880	Cucurbita moschata (Rifu)	cmocuB349
Csa3G848880	Cucurbita moschata (Rifu)	cmocuB433
Csa3G848880	Cucurbita moschata (Rifu)	cmocuB877
Csa3G848880	Melon (DHL92) v3.5.1	cumeB190
Csa3G848880	Melon (DHL92) v3.5.1	cumeB228
Csa3G848880	Watermelon (Charleston Gray)	cuwcgB182
Csa3G848880	Watermelon (Charleston Gray)	cuwcgB254
Csa3G848880	Watermelon (97103) v1	cuwmB188
Csa3G848880	Watermelon (97103) v1	cuwmB217