Csa3G841480 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G841480
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionTranscription factor bHLH106; contains IPR011598 (Myc-type, basic helix-loop-helix (bHLH) domain)
LocationChr3 : 33838538 .. 33840172 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGCTTCCTCCAAAACCCAATCTCTCACTTTAGCAAAAGAAATTTTTTGAAATTTAAGAAGAAGGAATTTAATTTAGAGTAATGATGCAACGCCCTGATCATGATCATGATCAACCACAAAGCTCTGAGCTTTACAGATTGCTGGCACAGACCGGAGCCTTCACCCTCGGCGGTCCGGCCTTTCCTCCGCCGCCGGCTTCTACTCAAACCATGTCCAGCTCTTCTTCTTATTACCCTCTGGATAATAATAAGTCTCCCCAAGGGGTGGCCGCGCCGACGCCTCACGATAGAGCTTTGGCGGCTTTGAAGAATCATAAGGAGGCTGAGAAGCGGAGGAGGGAGAGAATTAATTCTCATCTTGATAAGCTTCGTACTCTTCTTCCTTGTAATTCTAAGGTCATCCTTTTCTCTTTTCCTTTTAATTATTTTACTCGTTAATAATTTCTCCATCTCTTCTTTTCTTTCATTTCTCCACACCCTATTATAAACCCAACAAACACTGACAAATTGTTAGAACAACAGACCTCTTTATATATTATCATTAACATAGTTTGTCATTCATTATAAACTCAGAATCATCCTAGCCTATTTGATCTGGGATTTTGTTTTCCTCACATATGAACTTGGCTATTTGTATACACAGTCAAAGAAAACTGGAGTCCGATATTTAGACGATGGTGATGAGATTCAACTCATTTCTTCTTAACCCAGCTTTATAAAAAAAAAAAAGGGATACGAGCGTATATGTGTACAAGTAAAAGGAACAAGAATGAATTCTTTTTAAAGAATCTTTGGTGAACTCCAACCCTAAGATTTTCTGAACACTACAAACAGATGTTTGTTTGTTTGTTGGTTGAGTTTAGACAAATTTAGAGACAGTGTTTGTTTGTTTTCTTCAAAGCAAAAACTGCCAAAACTCTCTCTTCACTGCCAAAAAGTCATAAAATACAACCTCACTTTTTTGTTCTTTCTCTCTACTTACAATCTTCTTACCCCTATTATTTTAGTGTGTATTTAGGAAAGTTTGAAACCTTTATTATTTCCAACCCTTATCTACACTCATCCGGTGAATTTAGTATATGCTCAATGGATCGAACTAATATATATATAACTCAAATTCAAGTTTCGCTCCTTACATTTTTTTTTCCAACATACACTTATAATTCACATTTTTTCAATTAGACGGACAAGGCATCTCTTCTTGCAAAAGTTGTTGAGCGAGTGAAAGAGCTTAAAAACGAGACGTTGGAGATCGCAGAGCTCGAAAGCTTCCCCTCGGAGACCGATGAGATCAGTGTGCTTTCTGGGGAGAAATCGGAGGATGGAAGGCTTCTGTTCAAGGCATCGTTGTGTTGTGAGGACCGCTCTGACCTCATCCCTGACCTTAATGATATCCTTAATTCTCTACACCTCAAAACCCTTAGGGCTGACATTGTCACGGTTGGTGGTCGAATTCGTAACGTCCTGCTTATCGCCGCTAACGACCACCATAGTGTCGAATCTGTTCATTTCCTTCAAAATGCGTTGAAATCTCTTATTGAACGCTCAAATTCTAGCCTTACATCCAAGAGGAGGCGCCTTGTACTTCACCACAAATGATTATTATTCATTCTCAATATCTTCCTTTTTTCAGA

mRNA sequence

ATGATGCAACGCCCTGATCATGATCATGATCAACCACAAAGCTCTGAGCTTTACAGATTGCTGGCACAGACCGGAGCCTTCACCCTCGGCGGTCCGGCCTTTCCTCCGCCGCCGGCTTCTACTCAAACCATGTCCAGCTCTTCTTCTTATTACCCTCTGGATAATAATAAGTCTCCCCAAGGGGTGGCCGCGCCGACGCCTCACGATAGAGCTTTGGCGGCTTTGAAGAATCATAAGGAGGCTGAGAAGCGGAGGAGGGAGAGAATTAATTCTCATCTTGATAAGCTTCGTACTCTTCTTCCTTGTAATTCTAAGACGGACAAGGCATCTCTTCTTGCAAAAGTTGTTGAGCGAGTGAAAGAGCTTAAAAACGAGACGTTGGAGATCGCAGAGCTCGAAAGCTTCCCCTCGGAGACCGATGAGATCAGTGTGCTTTCTGGGGAGAAATCGGAGGATGGAAGGCTTCTGTTCAAGGCATCGTTGTGTTGTGAGGACCGCTCTGACCTCATCCCTGACCTTAATGATATCCTTAATTCTCTACACCTCAAAACCCTTAGGGCTGACATTGTCACGGTTGGTGGTCGAATTCGTAACGTCCTGCTTATCGCCGCTAACGACCACCATAGTGTCGAATCTGTTCATTTCCTTCAAAATGCGTTGAAATCTCTTATTGAACGCTCAAATTCTAGCCTTACATCCAAGAGGAGGCGCCTTGTACTTCACCACAAATGA

Coding sequence (CDS)

ATGATGCAACGCCCTGATCATGATCATGATCAACCACAAAGCTCTGAGCTTTACAGATTGCTGGCACAGACCGGAGCCTTCACCCTCGGCGGTCCGGCCTTTCCTCCGCCGCCGGCTTCTACTCAAACCATGTCCAGCTCTTCTTCTTATTACCCTCTGGATAATAATAAGTCTCCCCAAGGGGTGGCCGCGCCGACGCCTCACGATAGAGCTTTGGCGGCTTTGAAGAATCATAAGGAGGCTGAGAAGCGGAGGAGGGAGAGAATTAATTCTCATCTTGATAAGCTTCGTACTCTTCTTCCTTGTAATTCTAAGACGGACAAGGCATCTCTTCTTGCAAAAGTTGTTGAGCGAGTGAAAGAGCTTAAAAACGAGACGTTGGAGATCGCAGAGCTCGAAAGCTTCCCCTCGGAGACCGATGAGATCAGTGTGCTTTCTGGGGAGAAATCGGAGGATGGAAGGCTTCTGTTCAAGGCATCGTTGTGTTGTGAGGACCGCTCTGACCTCATCCCTGACCTTAATGATATCCTTAATTCTCTACACCTCAAAACCCTTAGGGCTGACATTGTCACGGTTGGTGGTCGAATTCGTAACGTCCTGCTTATCGCCGCTAACGACCACCATAGTGTCGAATCTGTTCATTTCCTTCAAAATGCGTTGAAATCTCTTATTGAACGCTCAAATTCTAGCCTTACATCCAAGAGGAGGCGCCTTGTACTTCACCACAAATGA

Protein sequence

MMQRPDHDHDQPQSSELYRLLAQTGAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQGVAAPTPHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLEIAELESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTLRADIVTVGGRIRNVLLIAANDHHSVESVHFLQNALKSLIERSNSSLTSKRRRLVLHHK*
Homology
[Close]
BLAST of Csa3G841480 vs. Swiss-Prot
Match: BH106_ARATH (Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 5.1e-64
Identity = 142/252 (56.35%), Postives = 179/252 (71.03%), Query Frame = 1 

Query: 11  QPQSSE--LYRLLAQT----GAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQGVAA 70
           QP++S+  LY  LA      G + + G       +   + SS+SSYYPL    +  G+  
Sbjct: 2   QPETSDQMLYSFLAGNEVGGGGYCVSGDYMTTMQSLCGSSSSTSSYYPL----AISGIGE 61

Query: 71  PTPHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKN 130
               DRALAAL+NHKEAE+RRRERINSHL+KLR +L CNSKTDKA+LLAKVV+RV+ELK 
Sbjct: 62  TMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQ 121

Query: 131 ETLEIAELES--FPSETDEISVLS-GEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSLH 190
           +TLE ++ +    PSETDEISVL  G+ S DG ++FKASLCCEDRSDL+PDL +IL SL+
Sbjct: 122 QTLETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLN 181

Query: 191 LKTLRADIVTVGGRIRNVLLIAAN-DHHSVESVHFLQNALKSLIERSNSSL--------- 242
           +KTLRA++VT+GGR R+VL++AA+ + H VESVHFLQNALKSL+ERS+ SL         
Sbjct: 182 MKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLLERSSKSLMERSSGGGG 241

[Close]
BLAST of Csa3G841480 vs. Swiss-Prot
Match: BH107_ARATH (Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 9.0e-53
Identity = 108/167 (64.67%), Postives = 138/167 (82.63%), Query Frame = 1 

Query: 69  DRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLE 128
           D+ALA+L+NHKEAE++RR RINSHL+KLR LL CNSKTDK++LLAKVV+RVKELK +TLE
Sbjct: 40  DKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQTLE 99

Query: 129 IAELESFPSETDEISVLSGE---KSEDGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTL 188
           I + E+ PSETDEISVL+ E   + +D R++FK S CCEDR +L+ DL + L SL ++TL
Sbjct: 100 ITD-ETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKSLQMETL 159

Query: 189 RADIVTVGGRIRNVLLIAAN-DHHSVESVHFLQNALKSLIERSNSSL 232
            AD+ TVGGR RNVL++AA+ +HH V+SV+FLQNALKSL+ERS+ S+
Sbjct: 160 FADMTTVGGRTRNVLVVAADKEHHGVQSVNFLQNALKSLLERSSKSV 205

[Close]
BLAST of Csa3G841480 vs. Swiss-Prot
Match: BH030_ARATH (Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.4e-43
Identity = 94/185 (50.81%), Postives = 130/185 (70.27%), Query Frame = 1 

Query: 70  RALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLEI 129
           +ALAA K+H EAE+RRRERIN+HL KLR++LP  +KTDKASLLA+V++ VKELK ET  I
Sbjct: 170 KALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVI 229

Query: 130 AELESFPSETDEISVLSGEKSE--DGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTLRA 189
           +E    P+E+DE++V   E+ E  DGR + KASLCCEDRSDL+PD+   L ++ LKTL+A
Sbjct: 230 SETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLKAMRLKTLKA 289

Query: 190 DIVTVGGRIRNVLLIAANDHHSVE-----SVHFLQNALKSLIERSN-----SSLTSKRRR 243
           +I TVGGR++NVL +   +    E      +  ++ ALK+++E+SN     SS  +KR+R
Sbjct: 290 EITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVMEKSNVEESSSSGNAKRQR 349

[Close]
BLAST of Csa3G841480 vs. Swiss-Prot
Match: BH032_ARATH (Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.0e-35
Identity = 71/134 (52.99%), Postives = 103/134 (76.87%), Query Frame = 1 

Query: 70  RALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLEI 129
           +ALAA K+H EAE+RRRERIN+HL KLR++LP  +KTDKASLLA+V++ +KELK +T +I
Sbjct: 128 KALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQI 187

Query: 130 AELESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTLRADI 189
            +    P+E D+++V S    E+G L+ +AS CC+DR+DL+ D+ + L SL L+TL+A+I
Sbjct: 188 TDTYQVPTECDDLTVDSSYNDEEGNLVIRASFCCQDRTDLMHDVINALKSLRLRTLKAEI 247

Query: 190 VTVGGRIRNVLLIA 204
            TVGGR++N+L ++
Sbjct: 248 ATVGGRVKNILFLS 261

[Close]
BLAST of Csa3G841480 vs. Swiss-Prot
Match: BH051_ARATH (Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.5e-28
Identity = 78/209 (37.32%), Postives = 119/209 (56.94%), Query Frame = 1 

Query: 40  STQTMSSSSSYYPLDNNKSPQGVAAPTPHDRALAAL-------KNHKEAEKRRRERINSH 99
           S Q+ SS S +   +   S        P D  +  +       ++H+ AEKRRR+RINSH
Sbjct: 22  SLQSESSDSDWNRFNLGFSSSSFGGNFPADDCVGGIEKAESLSRSHRLAEKRRRDRINSH 81

Query: 100 LDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLEIAELESFPSETDEISV----LSGE 159
           L  LR L+P + K DKA+LLA V+E+VKELK +  E    +  P+E DE++V    +S  
Sbjct: 82  LTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAESPIFQDLPTEADEVTVQPETISDF 141

Query: 160 KSEDGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTLRADIVTVGGRIR-NVLLIAANDH 219
           +S    ++FKAS CCED+ + I ++  +L  L L+T++A+I++VGGR+R N +L  +N +
Sbjct: 142 ESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLETIQAEIISVGGRMRINFILKDSNCN 201

Query: 220 HSVE---SVHFLQNALKSLIERSNSSLTS 234
            +     S   L+ +L S + R  SS T+
Sbjct: 202 ETTNIAASAKALKQSLCSALNRITSSSTT 230

[Close]
BLAST of Csa3G841480 vs. TrEMBL
Match: A0A0A0LFL0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G841480 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 1.4e-132
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1 

Query: 1   MMQRPDHDHDQPQSSELYRLLAQTGAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQ 60
           MMQRPDHDHDQPQSSELYRLLAQTGAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQ
Sbjct: 1   MMQRPDHDHDQPQSSELYRLLAQTGAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQ 60

Query: 61  GVAAPTPHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVK 120
           GVAAPTPHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVK
Sbjct: 61  GVAAPTPHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVK 120

Query: 121 ELKNETLEIAELESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSL 180
           ELKNETLEIAELESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSL
Sbjct: 121 ELKNETLEIAELESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSL 180

Query: 181 HLKTLRADIVTVGGRIRNVLLIAANDHHSVESVHFLQNALKSLIERSNSSLTSKRRRLVL 240
           HLKTLRADIVTVGGRIRNVLLIAANDHHSVESVHFLQNALKSLIERSNSSLTSKRRRLVL
Sbjct: 181 HLKTLRADIVTVGGRIRNVLLIAANDHHSVESVHFLQNALKSLIERSNSSLTSKRRRLVL 240

Query: 241 HHK 244
           HHK
Sbjct: 241 HHK 243

[Close]
BLAST of Csa3G841480 vs. TrEMBL
Match: A0A061F2R4_THECC (Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_024016 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 4.6e-80
Identity = 165/234 (70.51%), Postives = 195/234 (83.33%), Query Frame = 1 

Query: 11  QPQSSELYRLLAQTGAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQGVAAPT-PHD 70
           QP++SELYR LAQ G  + G PA    P   Q+ SSSS+YYPL+ +    GV   T P D
Sbjct: 64  QPENSELYRFLAQNGVGSYGFPANLEFPVM-QSFSSSSTYYPLEMS----GVTTETTPQD 123

Query: 71  RALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLEI 130
           RALAALKNHKEAEKRRRERINSHL++LR+LLPCNSKTDKASLLAKVV+RVKELK +TLE+
Sbjct: 124 RALAALKNHKEAEKRRRERINSHLNRLRSLLPCNSKTDKASLLAKVVQRVKELKQQTLEL 183

Query: 131 AELESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTLRADI 190
            ELE+FPSE DEI+VLS + + DGRL+FKASLCCEDRSDL+P+L +IL SLHLKTL+A++
Sbjct: 184 TELEAFPSEADEITVLSCDYTIDGRLIFKASLCCEDRSDLLPELIEILKSLHLKTLKAEM 243

Query: 191 VTVGGRIRNVLLIAANDHHSVESVHFLQNALKSLIERSNSSLTSKRRRLVLHHK 244
            T+GGRIRNVL++AA+  HS+ESVHFLQNALKSL+ERSNSS  SKRRR VL HK
Sbjct: 244 ATLGGRIRNVLIVAADKDHSIESVHFLQNALKSLLERSNSSDRSKRRR-VLDHK 291

[Close]
BLAST of Csa3G841480 vs. TrEMBL
Match: B9RUA4_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1637360 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.0e-79
Identity = 161/234 (68.80%), Postives = 187/234 (79.91%), Query Frame = 1 

Query: 10  DQPQSSELYRLLAQTGAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQGVAAPTPHD 69
           + P+ S+LYR LA+ G F +G    P   +   + SSS   YPL+ +     +   TP D
Sbjct: 5   NSPEISQLYRFLAENGVFNVGSCGLPAMQSLCSSSSSSYHNYPLEGSV----ITDMTPQD 64

Query: 70  RALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLEI 129
           RALAALKNHKEAEKRRRERINSHLDKLR LLPCNSKTDKASLLAKVV+RV+ELK +T +I
Sbjct: 65  RALAALKNHKEAEKRRRERINSHLDKLRGLLPCNSKTDKASLLAKVVQRVRELKQQTSQI 124

Query: 130 AELESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTLRADI 189
             L+SFPSETDEI+VLSGE S DG+L+FKASLCCEDRSDL+PDL +IL SLHLKTL+A++
Sbjct: 125 PGLDSFPSETDEITVLSGEYSSDGQLIFKASLCCEDRSDLLPDLIEILKSLHLKTLKAEM 184

Query: 190 VTVGGRIRNVLLIAANDHHSVESVHFLQNALKSLIERSNSSLTSKRRRLVLHHK 244
           VT+GGRIRNVL+IAA   HS+ESVHFLQ ALKSLIERSNSS  SKRRR VL HK
Sbjct: 185 VTLGGRIRNVLIIAAEKDHSIESVHFLQTALKSLIERSNSSDRSKRRR-VLDHK 233

[Close]
BLAST of Csa3G841480 vs. TrEMBL
Match: A0A067K5D0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20010 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.5e-78
Identity = 159/232 (68.53%), Postives = 187/232 (80.60%), Query Frame = 1 

Query: 12  PQSSELYRLLAQTGAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQGVAAPTPHDRA 71
           P++S LYRLLA+ G F +G   FP   +   + SSS   YP + +     +   TP DRA
Sbjct: 7   PENSHLYRLLAENGVFNIGPYGFPAMQSLCSSSSSSYHNYPQERSI----ITDMTPQDRA 66

Query: 72  LAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLEIAE 131
           LAALKNHKEAEKRRRERINSHLDKLR+LLPCNSKTDKASLLAKVV+RV+ELK +T +I  
Sbjct: 67  LAALKNHKEAEKRRRERINSHLDKLRSLLPCNSKTDKASLLAKVVQRVRELKQQTSQIPG 126

Query: 132 LESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTLRADIVT 191
           LE+FPSETDEI+VLSGE S DG+L+FKASLCCEDRSDL+PDL +IL SLHLKTL A++VT
Sbjct: 127 LETFPSETDEITVLSGEYSGDGQLIFKASLCCEDRSDLLPDLIEILKSLHLKTLSAEMVT 186

Query: 192 VGGRIRNVLLIAANDHHSVESVHFLQNALKSLIERSNSSLTSKRRRLVLHHK 244
           +GGRIRNVL++AA   HS+ESVHFLQ ALKSL+ERSN+S  SKRRR VL HK
Sbjct: 187 LGGRIRNVLIVAAEKDHSIESVHFLQTALKSLLERSNASDRSKRRR-VLDHK 233

[Close]
BLAST of Csa3G841480 vs. TrEMBL
Match: A9P9G7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s03460g PE=2 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 4.3e-78
Identity = 154/227 (67.84%), Postives = 185/227 (81.50%), Query Frame = 1 

Query: 13  QSSELYRLLAQTGAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQGVAAPTPHDRAL 72
           ++S+LYR LA+ G   +G   FP     T   SSS+SY+  +       +   TP DRAL
Sbjct: 8   ENSQLYRFLAENGMINVGAYGFPGAAMQTLCTSSSTSYHNNNYQFESSVITDMTPQDRAL 67

Query: 73  AALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLEIAEL 132
           AALKNHKEAEKRRRERINSHLDKLR LL CNSKTDKASLLAKVV+RV+ELK +T E++ L
Sbjct: 68  AALKNHKEAEKRRRERINSHLDKLRGLLLCNSKTDKASLLAKVVQRVRELKQQTSELSGL 127

Query: 133 ESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTLRADIVTV 192
           E+FPSETDE++VLSGE S DG+L+FKASLCCEDR DL+P+LN+IL SLHLKTL+A++VT+
Sbjct: 128 ETFPSETDEVTVLSGEYSSDGQLIFKASLCCEDRLDLMPELNEILKSLHLKTLKAEMVTL 187

Query: 193 GGRIRNVLLIAANDHHSVESVHFLQNALKSLIERSNSSLTSKRRRLV 240
           GGRIRNVL+IAA+  HSVESVHFLQNALKSL+ERSNSS  SKRRR++
Sbjct: 188 GGRIRNVLIIAADKDHSVESVHFLQNALKSLLERSNSSEKSKRRRIL 234

[Close]
BLAST of Csa3G841480 vs. TAIR10
Match: AT2G41130.1 (AT2G41130.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 245.7 bits (626), Expect = 2.9e-65
Identity = 142/252 (56.35%), Postives = 179/252 (71.03%), Query Frame = 1 

Query: 11  QPQSSE--LYRLLAQT----GAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQGVAA 70
           QP++S+  LY  LA      G + + G       +   + SS+SSYYPL    +  G+  
Sbjct: 2   QPETSDQMLYSFLAGNEVGGGGYCVSGDYMTTMQSLCGSSSSTSSYYPL----AISGIGE 61

Query: 71  PTPHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKN 130
               DRALAAL+NHKEAE+RRRERINSHL+KLR +L CNSKTDKA+LLAKVV+RV+ELK 
Sbjct: 62  TMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQ 121

Query: 131 ETLEIAELES--FPSETDEISVLS-GEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSLH 190
           +TLE ++ +    PSETDEISVL  G+ S DG ++FKASLCCEDRSDL+PDL +IL SL+
Sbjct: 122 QTLETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLN 181

Query: 191 LKTLRADIVTVGGRIRNVLLIAAN-DHHSVESVHFLQNALKSLIERSNSSL--------- 242
           +KTLRA++VT+GGR R+VL++AA+ + H VESVHFLQNALKSL+ERS+ SL         
Sbjct: 182 MKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLLERSSKSLMERSSGGGG 241

[Close]
BLAST of Csa3G841480 vs. TAIR10
Match: AT3G56770.1 (AT3G56770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 208.4 bits (529), Expect = 5.1e-54
Identity = 108/167 (64.67%), Postives = 138/167 (82.63%), Query Frame = 1 

Query: 69  DRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLE 128
           D+ALA+L+NHKEAE++RR RINSHL+KLR LL CNSKTDK++LLAKVV+RVKELK +TLE
Sbjct: 40  DKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQTLE 99

Query: 129 IAELESFPSETDEISVLSGE---KSEDGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTL 188
           I + E+ PSETDEISVL+ E   + +D R++FK S CCEDR +L+ DL + L SL ++TL
Sbjct: 100 ITD-ETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKSLQMETL 159

Query: 189 RADIVTVGGRIRNVLLIAAN-DHHSVESVHFLQNALKSLIERSNSSL 232
            AD+ TVGGR RNVL++AA+ +HH V+SV+FLQNALKSL+ERS+ S+
Sbjct: 160 FADMTTVGGRTRNVLVVAADKEHHGVQSVNFLQNALKSLLERSSKSV 205

[Close]
BLAST of Csa3G841480 vs. TAIR10
Match: AT1G68810.1 (AT1G68810.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 175.3 bits (443), Expect = 4.8e-44
Identity = 94/185 (50.81%), Postives = 130/185 (70.27%), Query Frame = 1 

Query: 70  RALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLEI 129
           +ALAA K+H EAE+RRRERIN+HL KLR++LP  +KTDKASLLA+V++ VKELK ET  I
Sbjct: 170 KALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVI 229

Query: 130 AELESFPSETDEISVLSGEKSE--DGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTLRA 189
           +E    P+E+DE++V   E+ E  DGR + KASLCCEDRSDL+PD+   L ++ LKTL+A
Sbjct: 230 SETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLKAMRLKTLKA 289

Query: 190 DIVTVGGRIRNVLLIAANDHHSVE-----SVHFLQNALKSLIERSN-----SSLTSKRRR 243
           +I TVGGR++NVL +   +    E      +  ++ ALK+++E+SN     SS  +KR+R
Sbjct: 290 EITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVMEKSNVEESSSSGNAKRQR 349

[Close]
BLAST of Csa3G841480 vs. TAIR10
Match: AT3G25710.1 (AT3G25710.1 basic helix-loop-helix 32)

HSP 1 Score: 151.8 bits (382), Expect = 5.6e-37
Identity = 71/134 (52.99%), Postives = 103/134 (76.87%), Query Frame = 1 

Query: 70  RALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLEI 129
           +ALAA K+H EAE+RRRERIN+HL KLR++LP  +KTDKASLLA+V++ +KELK +T +I
Sbjct: 128 KALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQI 187

Query: 130 AELESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTLRADI 189
            +    P+E D+++V S    E+G L+ +AS CC+DR+DL+ D+ + L SL L+TL+A+I
Sbjct: 188 TDTYQVPTECDDLTVDSSYNDEEGNLVIRASFCCQDRTDLMHDVINALKSLRLRTLKAEI 247

Query: 190 VTVGGRIRNVLLIA 204
            TVGGR++N+L ++
Sbjct: 248 ATVGGRVKNILFLS 261

[Close]
BLAST of Csa3G841480 vs. TAIR10
Match: AT2G40200.1 (AT2G40200.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 126.3 bits (316), Expect = 2.5e-29
Identity = 78/209 (37.32%), Postives = 119/209 (56.94%), Query Frame = 1 

Query: 40  STQTMSSSSSYYPLDNNKSPQGVAAPTPHDRALAAL-------KNHKEAEKRRRERINSH 99
           S Q+ SS S +   +   S        P D  +  +       ++H+ AEKRRR+RINSH
Sbjct: 22  SLQSESSDSDWNRFNLGFSSSSFGGNFPADDCVGGIEKAESLSRSHRLAEKRRRDRINSH 81

Query: 100 LDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLEIAELESFPSETDEISV----LSGE 159
           L  LR L+P + K DKA+LLA V+E+VKELK +  E    +  P+E DE++V    +S  
Sbjct: 82  LTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAESPIFQDLPTEADEVTVQPETISDF 141

Query: 160 KSEDGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTLRADIVTVGGRIR-NVLLIAANDH 219
           +S    ++FKAS CCED+ + I ++  +L  L L+T++A+I++VGGR+R N +L  +N +
Sbjct: 142 ESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLETIQAEIISVGGRMRINFILKDSNCN 201

Query: 220 HSVE---SVHFLQNALKSLIERSNSSLTS 234
            +     S   L+ +L S + R  SS T+
Sbjct: 202 ETTNIAASAKALKQSLCSALNRITSSSTT 230

[Close]
BLAST of Csa3G841480 vs. NCBI nr
Match: gi|449446883|ref|XP_004141200.1| (PREDICTED: transcription factor bHLH106-like [Cucumis sativus])

HSP 1 Score: 480.3 bits (1235), Expect = 2.0e-132
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1 

Query: 1   MMQRPDHDHDQPQSSELYRLLAQTGAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQ 60
           MMQRPDHDHDQPQSSELYRLLAQTGAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQ
Sbjct: 1   MMQRPDHDHDQPQSSELYRLLAQTGAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQ 60

Query: 61  GVAAPTPHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVK 120
           GVAAPTPHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVK
Sbjct: 61  GVAAPTPHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVK 120

Query: 121 ELKNETLEIAELESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSL 180
           ELKNETLEIAELESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSL
Sbjct: 121 ELKNETLEIAELESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSL 180

Query: 181 HLKTLRADIVTVGGRIRNVLLIAANDHHSVESVHFLQNALKSLIERSNSSLTSKRRRLVL 240
           HLKTLRADIVTVGGRIRNVLLIAANDHHSVESVHFLQNALKSLIERSNSSLTSKRRRLVL
Sbjct: 181 HLKTLRADIVTVGGRIRNVLLIAANDHHSVESVHFLQNALKSLIERSNSSLTSKRRRLVL 240

Query: 241 HHK 244
           HHK
Sbjct: 241 HHK 243

[Close]
BLAST of Csa3G841480 vs. NCBI nr
Match: gi|659129994|ref|XP_008464948.1| (PREDICTED: transcription factor bHLH106-like [Cucumis melo])

HSP 1 Score: 449.9 bits (1156), Expect = 2.8e-123
Identity = 234/245 (95.51%), Postives = 239/245 (97.55%), Query Frame = 1 

Query: 1   MMQRPDHDHDQPQSSELYRLLAQTGAFTLGGPAFPPPPAST-QTMS-SSSSYYPLDNNKS 60
           MMQR  HDHDQPQSSELYRLLAQTGAF+LGG AFPPPPA+T QTMS SSSSYYPLDNNKS
Sbjct: 1   MMQR--HDHDQPQSSELYRLLAQTGAFSLGGAAFPPPPATTTQTMSNSSSSYYPLDNNKS 60

Query: 61  PQGVAAPTPHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVER 120
           P GVAAP+PHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVER
Sbjct: 61  PPGVAAPSPHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVER 120

Query: 121 VKELKNETLEIAELESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILN 180
           VKELKNETLEIAELESFPSETDEISVLSGEKSEDGRL+FKASLCCEDRSDLIPDLNDILN
Sbjct: 121 VKELKNETLEIAELESFPSETDEISVLSGEKSEDGRLVFKASLCCEDRSDLIPDLNDILN 180

Query: 181 SLHLKTLRADIVTVGGRIRNVLLIAANDHHSVESVHFLQNALKSLIERSNSSLTSKRRRL 240
           SLHLKTLRADIVTVGGRIRNVLLIAANDHHS+ESVHFLQNALKSLIERSNSSLTSKRRRL
Sbjct: 181 SLHLKTLRADIVTVGGRIRNVLLIAANDHHSIESVHFLQNALKSLIERSNSSLTSKRRRL 240

Query: 241 VLHHK 244
           VLHHK
Sbjct: 241 VLHHK 243

[Close]
BLAST of Csa3G841480 vs. NCBI nr
Match: gi|590634203|ref|XP_007028307.1| (Basic helix-loop-helix DNA-binding superfamily protein [Theobroma cacao])

HSP 1 Score: 305.8 bits (782), Expect = 6.6e-80
Identity = 165/234 (70.51%), Postives = 195/234 (83.33%), Query Frame = 1 

Query: 11  QPQSSELYRLLAQTGAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQGVAAPT-PHD 70
           QP++SELYR LAQ G  + G PA    P   Q+ SSSS+YYPL+ +    GV   T P D
Sbjct: 64  QPENSELYRFLAQNGVGSYGFPANLEFPVM-QSFSSSSTYYPLEMS----GVTTETTPQD 123

Query: 71  RALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLEI 130
           RALAALKNHKEAEKRRRERINSHL++LR+LLPCNSKTDKASLLAKVV+RVKELK +TLE+
Sbjct: 124 RALAALKNHKEAEKRRRERINSHLNRLRSLLPCNSKTDKASLLAKVVQRVKELKQQTLEL 183

Query: 131 AELESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTLRADI 190
            ELE+FPSE DEI+VLS + + DGRL+FKASLCCEDRSDL+P+L +IL SLHLKTL+A++
Sbjct: 184 TELEAFPSEADEITVLSCDYTIDGRLIFKASLCCEDRSDLLPELIEILKSLHLKTLKAEM 243

Query: 191 VTVGGRIRNVLLIAANDHHSVESVHFLQNALKSLIERSNSSLTSKRRRLVLHHK 244
            T+GGRIRNVL++AA+  HS+ESVHFLQNALKSL+ERSNSS  SKRRR VL HK
Sbjct: 244 ATLGGRIRNVLIVAADKDHSIESVHFLQNALKSLLERSNSSDRSKRRR-VLDHK 291

[Close]
BLAST of Csa3G841480 vs. NCBI nr
Match: gi|255552559|ref|XP_002517323.1| (PREDICTED: transcription factor bHLH106 [Ricinus communis])

HSP 1 Score: 303.1 bits (775), Expect = 4.3e-79
Identity = 161/234 (68.80%), Postives = 187/234 (79.91%), Query Frame = 1 

Query: 10  DQPQSSELYRLLAQTGAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQGVAAPTPHD 69
           + P+ S+LYR LA+ G F +G    P   +   + SSS   YPL+ +     +   TP D
Sbjct: 5   NSPEISQLYRFLAENGVFNVGSCGLPAMQSLCSSSSSSYHNYPLEGSV----ITDMTPQD 64

Query: 70  RALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLEI 129
           RALAALKNHKEAEKRRRERINSHLDKLR LLPCNSKTDKASLLAKVV+RV+ELK +T +I
Sbjct: 65  RALAALKNHKEAEKRRRERINSHLDKLRGLLPCNSKTDKASLLAKVVQRVRELKQQTSQI 124

Query: 130 AELESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTLRADI 189
             L+SFPSETDEI+VLSGE S DG+L+FKASLCCEDRSDL+PDL +IL SLHLKTL+A++
Sbjct: 125 PGLDSFPSETDEITVLSGEYSSDGQLIFKASLCCEDRSDLLPDLIEILKSLHLKTLKAEM 184

Query: 190 VTVGGRIRNVLLIAANDHHSVESVHFLQNALKSLIERSNSSLTSKRRRLVLHHK 244
           VT+GGRIRNVL+IAA   HS+ESVHFLQ ALKSLIERSNSS  SKRRR VL HK
Sbjct: 185 VTLGGRIRNVLIIAAEKDHSIESVHFLQTALKSLIERSNSSDRSKRRR-VLDHK 233

[Close]
BLAST of Csa3G841480 vs. NCBI nr
Match: gi|802708740|ref|XP_012084522.1| (PREDICTED: transcription factor bHLH106 [Jatropha curcas])

HSP 1 Score: 300.8 bits (769), Expect = 2.1e-78
Identity = 159/232 (68.53%), Postives = 187/232 (80.60%), Query Frame = 1 

Query: 12  PQSSELYRLLAQTGAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQGVAAPTPHDRA 71
           P++S LYRLLA+ G F +G   FP   +   + SSS   YP + +     +   TP DRA
Sbjct: 7   PENSHLYRLLAENGVFNIGPYGFPAMQSLCSSSSSSYHNYPQERSI----ITDMTPQDRA 66

Query: 72  LAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLEIAE 131
           LAALKNHKEAEKRRRERINSHLDKLR+LLPCNSKTDKASLLAKVV+RV+ELK +T +I  
Sbjct: 67  LAALKNHKEAEKRRRERINSHLDKLRSLLPCNSKTDKASLLAKVVQRVRELKQQTSQIPG 126

Query: 132 LESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTLRADIVT 191
           LE+FPSETDEI+VLSGE S DG+L+FKASLCCEDRSDL+PDL +IL SLHLKTL A++VT
Sbjct: 127 LETFPSETDEITVLSGEYSGDGQLIFKASLCCEDRSDLLPDLIEILKSLHLKTLSAEMVT 186

Query: 192 VGGRIRNVLLIAANDHHSVESVHFLQNALKSLIERSNSSLTSKRRRLVLHHK 244
           +GGRIRNVL++AA   HS+ESVHFLQ ALKSL+ERSN+S  SKRRR VL HK
Sbjct: 187 LGGRIRNVLIVAAEKDHSIESVHFLQTALKSLLERSNASDRSKRRR-VLDHK 233

The following BLAST results are available for this feature:
BLAST of Csa3G841480 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH106_ARATH5.1e-6456.35Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1[more]
BH107_ARATH9.0e-5364.67Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV... [more]
BH030_ARATH8.4e-4350.81Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1[more]
BH032_ARATH1.0e-3552.99Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1[more]
BH051_ARATH4.5e-2837.32Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1[more]
BLAST of Csa3G841480 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFL0_CUCSA1.4e-132100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G841480 PE=4 SV=1[more]
A0A061F2R4_THECC4.6e-8070.51Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM... [more]
B9RUA4_RICCO3.0e-7968.80DNA binding protein, putative OS=Ricinus communis GN=RCOM_1637360 PE=4 SV=1[more]
A0A067K5D0_JATCU1.5e-7868.53Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20010 PE=4 SV=1[more]
A9P9G7_POPTR4.3e-7867.84Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s03460g PE=2 SV=1[more]
BLAST of Csa3G841480 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G41130.12.9e-6556.35 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G56770.15.1e-5464.67 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G68810.14.8e-4450.81 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G25710.15.6e-3752.99 basic helix-loop-helix 32[more]
AT2G40200.12.5e-2937.32 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of Csa3G841480 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449446883|ref|XP_004141200.1|2.0e-132100.00PREDICTED: transcription factor bHLH106-like [Cucumis sativus][more]
gi|659129994|ref|XP_008464948.1|2.8e-12395.51PREDICTED: transcription factor bHLH106-like [Cucumis melo][more]
gi|590634203|ref|XP_007028307.1|6.6e-8070.51Basic helix-loop-helix DNA-binding superfamily protein [Theobroma cacao][more]
gi|255552559|ref|XP_002517323.1|4.3e-7968.80PREDICTED: transcription factor bHLH106 [Ricinus communis][more]
gi|802708740|ref|XP_012084522.1|2.1e-7868.53PREDICTED: transcription factor bHLH106 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU129877cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G841480.1Csa3G841480.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU129877CU129877transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 77..131
score: 1.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 76..122
score: 1.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 79..128
score: 1.3
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 73..122
score: 15
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 77..129
score: 1.96
NoneNo IPR availablePANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 69..240
score: 4.5
NoneNo IPR availablePANTHERPTHR12565:SF158TRANSCRIPTION FACTOR BHLH106-RELATEDcoord: 69..240
score: 4.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G841480Cla017143Watermelon (97103) v1cuwmB198
Csa3G841480MELO3C026599Melon (DHL92) v3.5.1cumeB211
Csa3G841480ClCG10G013680Watermelon (Charleston Gray)cuwcgB194
Csa3G841480Lsi03G013330Bottle gourd (USVL1VR-Ls)culsiB186
Csa3G841480MELO3C026599.2Melon (DHL92) v3.6.1cumedB207
Csa3G841480Cla97C10G196450Watermelon (97103) v2cuwmbB186
Csa3G841480Bhi11G001331Wax gourdcuwgoB236
Csa3G841480CSPI03G40440Wild cucumber (PI 183967)cpicuB120
Csa3G841480Cucsa.340200Cucumber (Gy14) v1cgycuB478
Csa3G841480CsGy3G037950Cucumber (Gy14) v2cgybcuB110
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G841480Cucurbita maxima (Rimu)cmacuB255