Csa3G834770 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G834770
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 33235451 .. 33235793 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAGAAGGCGAAAGGGATGAGGGCGGCGGCGGCGACGATGCAAACGTAGAGGGTGAAGACATAGTAGCTGAGGCCTCGAGCTGTGGCGGCTTTGAAGCCGGTGTTGGAACCAACGGTGGCGAACATCGCCGCAACCATGGCAGCGAATGGCACCAATTCTTTGTAAAACAACTTCCACCCCATTTTTCTGATCTTTGGTTTCTCCTTTCTTGTTGAGGGTTTGGTGTGTTATTGGGAGGAAAGTATTGGTGTTTTATTCACGTGGAAAATAGAAACTCTCCCCCCCAACTTGTTCCCTTTCTTTTTCCTTATGTGAAGTCCAATAATTACGGAATGA

mRNA sequence

ATGGAAGAAGAAGGCGAAAGGGATGAGGGCGGCGGCGGCGACGATGCAAACGTAGAGGGTGAAGACATAGTAGCTGAGGCCTCGAGCTGTGGCGGCTTTGAAGCCGGTGTTGGAACCAACGGTGGCGAACATCGCCGCAACCATGGCAGCGAATGGCACCAATTCTTTGTAAAACAACTTCCACCCCATTTTTCTGATCTTTGTCCAATAATTACGGAATGA

Coding sequence (CDS)

ATGGAAGAAGAAGGCGAAAGGGATGAGGGCGGCGGCGGCGACGATGCAAACGTAGAGGGTGAAGACATAGTAGCTGAGGCCTCGAGCTGTGGCGGCTTTGAAGCCGGTGTTGGAACCAACGGTGGCGAACATCGCCGCAACCATGGCAGCGAATGGCACCAATTCTTTGTAAAACAACTTCCACCCCATTTTTCTGATCTTTGTCCAATAATTACGGAATGA

Protein sequence

MEEEGERDEGGGGDDANVEGEDIVAEASSCGGFEAGVGTNGGEHRRNHGSEWHQFFVKQLPPHFSDLCPIITE*
Homology
[Close]
BLAST of Csa3G834770 vs. TrEMBL
Match: A0A0A0LCX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G834770 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 7.3e-37
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1 

Query: 1  MEEEGERDEGGGGDDANVEGEDIVAEASSCGGFEAGVGTNGGEHRRNHGSEWHQFFVKQL 60
          MEEEGERDEGGGGDDANVEGEDIVAEASSCGGFEAGVGTNGGEHRRNHGSEWHQFFVKQL
Sbjct: 1  MEEEGERDEGGGGDDANVEGEDIVAEASSCGGFEAGVGTNGGEHRRNHGSEWHQFFVKQL 60

Query: 61 PPHFSDLCPIITE 74
          PPHFSDLCPIITE
Sbjct: 61 PPHFSDLCPIITE 73

[Close]
BLAST of Csa3G834770 vs. NCBI nr
Match: gi|700204505|gb|KGN59638.1| (hypothetical protein Csa_3G834770 [Cucumis sativus])

HSP 1 Score: 160.6 bits (405), Expect = 1.0e-36
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1 

Query: 1  MEEEGERDEGGGGDDANVEGEDIVAEASSCGGFEAGVGTNGGEHRRNHGSEWHQFFVKQL 60
          MEEEGERDEGGGGDDANVEGEDIVAEASSCGGFEAGVGTNGGEHRRNHGSEWHQFFVKQL
Sbjct: 1  MEEEGERDEGGGGDDANVEGEDIVAEASSCGGFEAGVGTNGGEHRRNHGSEWHQFFVKQL 60

Query: 61 PPHFSDLCPIITE 74
          PPHFSDLCPIITE
Sbjct: 61 PPHFSDLCPIITE 73

The following BLAST results are available for this feature:
BLAST of Csa3G834770 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCX4_CUCSA7.3e-37100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G834770 PE=4 SV=1[more]
BLAST of Csa3G834770 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700204505|gb|KGN59638.1|1.0e-36100.00hypothetical protein Csa_3G834770 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G834770.1Csa3G834770.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G834770ClCG10G014430Watermelon (Charleston Gray)cuwcgB194
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G834770Cucurbita maxima (Rimu)cmacuB124
Csa3G834770Cucurbita maxima (Rimu)cmacuB239
Csa3G834770Cucurbita maxima (Rimu)cmacuB704
Csa3G834770Cucurbita moschata (Rifu)cmocuB114
Csa3G834770Cucurbita moschata (Rifu)cmocuB226
Csa3G834770Cucurbita moschata (Rifu)cmocuB695
Csa3G834770Melon (DHL92) v3.5.1cumeB172
Csa3G834770Melon (DHL92) v3.5.1cumeB223
Csa3G834770Watermelon (Charleston Gray)cuwcgB178
Csa3G834770Watermelon (97103) v1cuwmB183
Csa3G834770Watermelon (97103) v1cuwmB198
Csa3G834770Cucurbita pepo (Zucchini)cpecuB597
Csa3G834770Cucurbita pepo (Zucchini)cpecuB671
Csa3G834770Bottle gourd (USVL1VR-Ls)culsiB175
Csa3G834770Bottle gourd (USVL1VR-Ls)culsiB186
Csa3G834770Cucumber (Gy14) v2cgybcuB110
Csa3G834770Cucumber (Gy14) v2cgybcuB217
Csa3G834770Melon (DHL92) v3.6.1cumedB156
Csa3G834770Melon (DHL92) v3.6.1cumedB207
Csa3G834770Silver-seed gourdcarcuB0467
Csa3G834770Silver-seed gourdcarcuB1031
Csa3G834770Watermelon (97103) v2cuwmbB186
Csa3G834770Watermelon (97103) v2cuwmbB254
Csa3G834770Wax gourdcuwgoB220
Csa3G834770Wax gourdcuwgoB267
Csa3G834770Cucumber (Chinese Long) v2cucuB017
Csa3G834770Cucumber (Chinese Long) v2cucuB022
Csa3G834770Cucumber (Chinese Long) v2cucuB107
Csa3G834770Cucumber (Gy14) v1cgycuB229
Csa3G834770Cucumber (Gy14) v1cgycuB478