Csa3G823630 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G823630
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 32463896 .. 32465425 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAATAGTGGTCATGTCTTGCCCCTTGGAAAAGAAGGAGCTTTGTTGGGTGTTGTTCACGGTTGTATTAGTGGAGTTGGAAATGATATTGAAAAAGACCACAAGAGAGCCAAATTTGTGAGCCTACTTTTTAAATAAGAGCGTTATGAAAAGGAAAATCAATAGTATCGTGTATTATAGAGTTTATGTTTTGTCTTCTGCTAGCTTTCTTTTCAATATGCAGTGAGACTATAATGGTCCCATGATTTGGGTTTCTTAGTTAATTATCACTTGGTCTTACACGTTTATTATCACTTTGCAATTCCACACTTTCTTAATTACACCAATTGATCACTCTCTCACTTTCTATTCACTCACGTACACCTTTTTTCCCTCTTCCTTTTTAACTTTATCTGGTGGGAAACAAGTTCGGTTTATTTTATAAAAAGTAATAATTAAACCGGATCTAAATAACTAGACCGAGTCATTCGATATCTGTCGGTTCGAAGCCTTCGAACCGGCTGCTGAAGTGCTGATTGCTTTGGGGTTTTTCTCAGCGTCGATTCTCTCTCTCCCTTCACTGCCGTCAGTCTCTTCCCCACTTGCCTCTCTCACAACTCACACTGCCGTCGATTCTCTCACCCACTGCTTCCGATGGTTTTTTTCACACGCACCTGCTCTCTCTCGTGCCTCATTTCCTGTATTCATGTTTCTTTTAGGGACAACGCTTTTTCTGGGTTTACAATTCTTTTTAGTTTGGGAAACTTGAAATTGTGATTTTATTTGATTAATTTGGTATCCAAACAGGGGATTTGGATTTTGGTGGGTTCTTCTGAAATAATGTAGAGATAATGGGATCATATCCAAACCTCAAATTTTCTGATATTACCTTATTTTTCTTCCTGTTGAAATGACGTTATAGTTAAAAATGCATAGGGGAATTCAGAAATTGTTGGAACTCAGTCACTTAACTGAACTGTGATTGTGTCAGCTCAGGTTATTTGAAAATTTTCGTGTAATTGAAGTTTGCCTGTTGCAATGGAGCTGTTAATTTATGGAGTTATTTAATTATTTATCAAATAAATTTGTTTCCATTGTTAAAAGATCTTGAATCGAAAGTTGTTCATGAAAGGTTTGTTTCAGGAATTTGATTCAGCTTGTTTTGAGTGAATGAGTTGCAGATAATTTCCGGGAGAATGGTGGGAGGAGAAAAGATTTATGGGATGCTTTTGGACAAATAGGAGATGAAAAGTCCAGATTGTCCCTTAAGTTAAAAAAACCCTACAAATCTCAATTTGGTGAATCTCCATCTTCTTCTCGCGCATACGGCAGAAATTCCCCTAAATCAGGCTATCAGCAACCTCACTATTAGATAGACTATGCACGAAAGTGAGGCAAAAACTGGCGGCGGCTTCATTGAACGGAGACAACATCAGAGCTCTGGCCGTTGAACCCTTCGAACGTTTGGGTAGTCACACGCGTGGGGGTCTAAATCGTGTTCACCTTCCGTCGAAGTCGCCGGCGGTCACAGTCAGCCAATCCGAGTGA

mRNA sequence

ATGATCAATAGTGGTCATGTCTTGCCCCTTGGAAAAGAAGGAGCTTTGTTGGGTGTTGTTCACGGTTGTATTAGTGGAGTTGGAAATGATATTGAAAAAGACCACAAGAGAGCCAAATTTACCGAGTCATTCGATATCTGTCGGTTCGAAGCCTTCGAACCGGCTGCTGAAGTGCTGATTGCTTTGGGGTTTTTCTCAGCGTCGATTCTCTCTCTCCCTTCACTGCCGTCAGTCTCTTCCCCACTTGCCTCTCTCACAACTCACACTGCCGTCGATTCTCTCACCCACTGCTTCCGATGGTTTTTTTCACACGCACCTGCTCTCTCTCGTGCCTCATTTCCTGGGATTTGGATTTTGGTGGGTTCTTCTGAAATAATGCTATCAGCAACCTCACTATTAGATAGACTATGCACGAAAGTGAGGCAAAAACTGGCGGCGGCTTCATTGAACGGAGACAACATCAGAGCTCTGGCCGTTGAACCCTTCGAACGTTTGGGTAGTCACACGCGTGGGGGTCTAAATCGTGTTCACCTTCCGTCGAAGTCGCCGGCGGTCACAGTCAGCCAATCCGAGTGA

Coding sequence (CDS)

ATGATCAATAGTGGTCATGTCTTGCCCCTTGGAAAAGAAGGAGCTTTGTTGGGTGTTGTTCACGGTTGTATTAGTGGAGTTGGAAATGATATTGAAAAAGACCACAAGAGAGCCAAATTTACCGAGTCATTCGATATCTGTCGGTTCGAAGCCTTCGAACCGGCTGCTGAAGTGCTGATTGCTTTGGGGTTTTTCTCAGCGTCGATTCTCTCTCTCCCTTCACTGCCGTCAGTCTCTTCCCCACTTGCCTCTCTCACAACTCACACTGCCGTCGATTCTCTCACCCACTGCTTCCGATGGTTTTTTTCACACGCACCTGCTCTCTCTCGTGCCTCATTTCCTGGGATTTGGATTTTGGTGGGTTCTTCTGAAATAATGCTATCAGCAACCTCACTATTAGATAGACTATGCACGAAAGTGAGGCAAAAACTGGCGGCGGCTTCATTGAACGGAGACAACATCAGAGCTCTGGCCGTTGAACCCTTCGAACGTTTGGGTAGTCACACGCGTGGGGGTCTAAATCGTGTTCACCTTCCGTCGAAGTCGCCGGCGGTCACAGTCAGCCAATCCGAGTGA

Protein sequence

MINSGHVLPLGKEGALLGVVHGCISGVGNDIEKDHKRAKFTESFDICRFEAFEPAAEVLIALGFFSASILSLPSLPSVSSPLASLTTHTAVDSLTHCFRWFFSHAPALSRASFPGIWILVGSSEIMLSATSLLDRLCTKVRQKLAAASLNGDNIRALAVEPFERLGSHTRGGLNRVHLPSKSPAVTVSQSE*
Homology
[Close]
BLAST of Csa3G823630 vs. TrEMBL
Match: A0A0A0LC03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G823630 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 3.4e-102
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1 

Query: 1   MINSGHVLPLGKEGALLGVVHGCISGVGNDIEKDHKRAKFTESFDICRFEAFEPAAEVLI 60
           MINSGHVLPLGKEGALLGVVHGCISGVGNDIEKDHKRAKFTESFDICRFEAFEPAAEVLI
Sbjct: 1   MINSGHVLPLGKEGALLGVVHGCISGVGNDIEKDHKRAKFTESFDICRFEAFEPAAEVLI 60

Query: 61  ALGFFSASILSLPSLPSVSSPLASLTTHTAVDSLTHCFRWFFSHAPALSRASFPGIWILV 120
           ALGFFSASILSLPSLPSVSSPLASLTTHTAVDSLTHCFRWFFSHAPALSRASFPGIWILV
Sbjct: 61  ALGFFSASILSLPSLPSVSSPLASLTTHTAVDSLTHCFRWFFSHAPALSRASFPGIWILV 120

Query: 121 GSSEIMLSATSLLDRLCTKVRQKLAAASLNGDNIRALAVEPFERLGSHTRGGLNRVHLPS 180
           GSSEIMLSATSLLDRLCTKVRQKLAAASLNGDNIRALAVEPFERLGSHTRGGLNRVHLPS
Sbjct: 121 GSSEIMLSATSLLDRLCTKVRQKLAAASLNGDNIRALAVEPFERLGSHTRGGLNRVHLPS 180

Query: 181 KSPAVTVSQSE 192
           KSPAVTVSQSE
Sbjct: 181 KSPAVTVSQSE 191

[Close]
BLAST of Csa3G823630 vs. NCBI nr
Match: gi|700204382|gb|KGN59515.1| (hypothetical protein Csa_3G823630 [Cucumis sativus])

HSP 1 Score: 379.0 bits (972), Expect = 4.8e-102
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1 

Query: 1   MINSGHVLPLGKEGALLGVVHGCISGVGNDIEKDHKRAKFTESFDICRFEAFEPAAEVLI 60
           MINSGHVLPLGKEGALLGVVHGCISGVGNDIEKDHKRAKFTESFDICRFEAFEPAAEVLI
Sbjct: 1   MINSGHVLPLGKEGALLGVVHGCISGVGNDIEKDHKRAKFTESFDICRFEAFEPAAEVLI 60

Query: 61  ALGFFSASILSLPSLPSVSSPLASLTTHTAVDSLTHCFRWFFSHAPALSRASFPGIWILV 120
           ALGFFSASILSLPSLPSVSSPLASLTTHTAVDSLTHCFRWFFSHAPALSRASFPGIWILV
Sbjct: 61  ALGFFSASILSLPSLPSVSSPLASLTTHTAVDSLTHCFRWFFSHAPALSRASFPGIWILV 120

Query: 121 GSSEIMLSATSLLDRLCTKVRQKLAAASLNGDNIRALAVEPFERLGSHTRGGLNRVHLPS 180
           GSSEIMLSATSLLDRLCTKVRQKLAAASLNGDNIRALAVEPFERLGSHTRGGLNRVHLPS
Sbjct: 121 GSSEIMLSATSLLDRLCTKVRQKLAAASLNGDNIRALAVEPFERLGSHTRGGLNRVHLPS 180

Query: 181 KSPAVTVSQSE 192
           KSPAVTVSQSE
Sbjct: 181 KSPAVTVSQSE 191

The following BLAST results are available for this feature:
BLAST of Csa3G823630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC03_CUCSA3.4e-102100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G823630 PE=4 SV=1[more]
BLAST of Csa3G823630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700204382|gb|KGN59515.1|4.8e-102100.00hypothetical protein Csa_3G823630 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU098289cucumber EST collection version 3.0transcribed_cluster
CU118025cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G823630.1Csa3G823630.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU098289CU098289transcribed_cluster
CU118025CU118025transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G823630Melon (DHL92) v3.5.1cumeB223
Csa3G823630Watermelon (Charleston Gray)cuwcgB194
Csa3G823630Watermelon (97103) v1cuwmB198
Csa3G823630Cucurbita pepo (Zucchini)cpecuB597
Csa3G823630Bottle gourd (USVL1VR-Ls)culsiB186
Csa3G823630Cucumber (Gy14) v2cgybcuB110
Csa3G823630Melon (DHL92) v3.6.1cumedB207
Csa3G823630Silver-seed gourdcarcuB0345
Csa3G823630Silver-seed gourdcarcuB0467
Csa3G823630Watermelon (97103) v2cuwmbB186
Csa3G823630Wax gourdcuwgoB220
Csa3G823630Wax gourdcuwgoB241
Csa3G823630Cucumber (Gy14) v1cgycuB478
Csa3G823630Cucurbita maxima (Rimu)cmacuB239
Csa3G823630Cucurbita maxima (Rimu)cmacuB831
Csa3G823630Cucurbita moschata (Rifu)cmocuB226
Csa3G823630Cucurbita moschata (Rifu)cmocuB819