Csa3G823090 (gene) Cucumber (Chinese Long) v2

NameCsa3G823090
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 32430805 .. 32431832 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGAGTCGAGAGATATCGAAGTTGATATATTGACAGCAGTTTCAACGGCCAAAAAGCGCGGACATATATTCTATAATTTCTCTATTCTATTCTCATTGCTCATCCAGATTCGGATACTCTCCCATGGCGGCTTCTCTCTTCTAGTCTTATCAATCTCACTGCACCCTCACACCAGTTTCTTGCATTTCTGTGTTTTTGTACGTATAATTCTTACCTTTTCTTTTCTCGCTTTGCCACCTTGTTCTCTCATTTTCTCTATGCAATGTTACCTTCGTAAATCTTGTTTTCTACTGATTGAGAACAAATTGACTGAAATAGAACTACTGGGTTTTTATCCTTATCTGTCGATGTTTTGTCTTTTGTTGAGAAATTGGAGTATATGTCGACGTTTTAGTTTGAATTTTGTGCAATTAACTTAAATTTTATTACTTTCTAATCTAGCTTTACAACACAGTGTTCTTCTTCCTGTAACAATATTGATTGATTGCTAATGGGGGTATTTACAATTTGAAAGCATTAGATAAACCCCACTTGAAATCACTCGTCTAAGTTGGTTCTTAGAGTTCACACCATTTCATTGTTAAGATATTGGATTTAGAAAGCCATCTATTCATTGGAGCTTTACCACACGCTTGAAGTTTTCCCCCCTGCTTATCTTTTTTGTATACAAAGCCTGACAATCTCTATTGTAATGCTTTTATTTCTCTCCTACTTCAAAATACTACACTTCTTCGGTTGTTCTTCTCGTTTTATAAAATACCAATTTCTTGATGCACTGCGTGTGTTGCTTCCCTGATGCCTGCACTTTTTTTTTTCACCTTGCTCTTAGGTTTTTATGTTTGAGGATATTCAGTAATGGACCATCTCTTTCCTTCTCAAAACTACTTGGTTTTCTATCTCCATCTCTCTCATGGTTTGTGAGATTTGTGTATATAGAAAGATTTGGAATCTTCTTTGGCATTGCCTCAATATGATTTTTTATTATTGAGTATGAGATTCTCAAATTCTTGTTTGTTTTCAGTGA

mRNA sequence

ATGGGTGAGTCGAGAGATATCGAAGTTGATATATTGACAGCAGTTTCAACGGCCAAAAAGCGCGGACATATATTCTATAATTTCTCTATTCTATTCTCATTGCTCATCCAGATTCGGATACTCTCCCATGGCGGCTTCTCTCTTCTAGTCTTATCAATCTCACTGCACCCTCACACCAGTTTCTTGCATTTCTGTGTTTTTTGA

Coding sequence (CDS)

ATGGGTGAGTCGAGAGATATCGAAGTTGATATATTGACAGCAGTTTCAACGGCCAAAAAGCGCGGACATATATTCTATAATTTCTCTATTCTATTCTCATTGCTCATCCAGATTCGGATACTCTCCCATGGCGGCTTCTCTCTTCTAGTCTTATCAATCTCACTGCACCCTCACACCAGTTTCTTGCATTTCTGTGTTTTTTGA

Protein sequence

MGESRDIEVDILTAVSTAKKRGHIFYNFSILFSLLIQIRILSHGGFSLLVLSISLHPHTSFLHFCVF*
BLAST of Csa3G823090 vs. TrEMBL
Match: A0A0A0LBZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G823090 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.0e-29
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1

Query: 1  MGESRDIEVDILTAVSTAKKRGHIFYNFSILFSLLIQIRILSHGGFSLLVLSISLHPHTS 60
          MGESRDIEVDILTAVSTAKKRGHIFYNFSILFSLLIQIRILSHGGFSLLVLSISLHPHTS
Sbjct: 1  MGESRDIEVDILTAVSTAKKRGHIFYNFSILFSLLIQIRILSHGGFSLLVLSISLHPHTS 60

Query: 61 FLHFCVF 68
          FLHFCVF
Sbjct: 61 FLHFCVF 67

BLAST of Csa3G823090 vs. NCBI nr
Match: gi|700204377|gb|KGN59510.1| (hypothetical protein Csa_3G823090 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 4.3e-29
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1

Query: 1  MGESRDIEVDILTAVSTAKKRGHIFYNFSILFSLLIQIRILSHGGFSLLVLSISLHPHTS 60
          MGESRDIEVDILTAVSTAKKRGHIFYNFSILFSLLIQIRILSHGGFSLLVLSISLHPHTS
Sbjct: 1  MGESRDIEVDILTAVSTAKKRGHIFYNFSILFSLLIQIRILSHGGFSLLVLSISLHPHTS 60

Query: 61 FLHFCVF 68
          FLHFCVF
Sbjct: 61 FLHFCVF 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LBZ9_CUCSA3.0e-29100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G823090 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700204377|gb|KGN59510.1|4.3e-29100.00hypothetical protein Csa_3G823090 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G823090.1Csa3G823090.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None