Csa3G816130 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G816130
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 31628574 .. 31629087 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTCCCTCTTTCGCCTTTAAACCGCCATCACAGCTCTCACCTGATCCAACGATGGCGATGCCTTCAGGATCAGCCATCCATGTATTGTGGACCCACAGACAACCTTGCCGTTGAAAAAGTTTCGGATTTTTTTTCTTGGGTTTTCAGTCATAATTGGCAGCCCGGAAGGAAACGGATAGTTTCATCATTTTTTCGATACGAAAATCGATTGGAGAGAGACACTGAGATTTTCGTGGTGAAATTAAACGCTGGAATTCCGGGTACGTTTTAATTTCTTCACATCTTTAAAGGGATTTCGGGTTCTGCTCTGTTCTTCTTTAGGACAAATAATCGTGGGTACTTTTTCTTAATCGAAAATTTGATCATAATCTTGTTAGTTTTTTATTTGGGGATGTGATTTTATCGATCTAGACTGAAGGGGTTTTGGCGTTTCGTTGCCTTGTTTGACTTTTGATGTAGTGACCGGAAATTTTCAATTTGTAGGCTGGGAAATTTGGCTTTGAAGTGGT

mRNA sequence

ATGGATTTCCCTCTTTCGCCTTTAAACCGCCATCACAGCTCTCACCTGATCCAACGATGGCGATGCCTTCAGGATCAGCCATCCATGTATTGTGGACCCACAGACAACCTTGCCGTTGAAAAAGTTTCGGATTTTTTTTCTTGGGTTTTCAGTCATAATTGGCAGCCCGGAAGGAAACGGATAGTTTCATCATTTTTTCGATACGAAAATCGATTGGAGAGAGACACTGAGATTTTCGTGGTGAAATTAAACGCTGGAATTCCGGGCTGGGAAATTTGGCTTTGA

Coding sequence (CDS)

ATGGATTTCCCTCTTTCGCCTTTAAACCGCCATCACAGCTCTCACCTGATCCAACGATGGCGATGCCTTCAGGATCAGCCATCCATGTATTGTGGACCCACAGACAACCTTGCCGTTGAAAAAGTTTCGGATTTTTTTTCTTGGGTTTTCAGTCATAATTGGCAGCCCGGAAGGAAACGGATAGTTTCATCATTTTTTCGATACGAAAATCGATTGGAGAGAGACACTGAGATTTTCGTGGTGAAATTAAACGCTGGAATTCCGGGCTGGGAAATTTGGCTTTGA

Protein sequence

MDFPLSPLNRHHSSHLIQRWRCLQDQPSMYCGPTDNLAVEKVSDFFSWVFSHNWQPGRKRIVSSFFRYENRLERDTEIFVVKLNAGIPGWEIWL*
Homology
[Close]
BLAST of Csa3G816130 vs. TrEMBL
Match: A0A0A0LBJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G816130 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 6.6e-51
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 1 

Query: 1  MDFPLSPLNRHHSSHLIQRWRCLQDQPSMYCGPTDNLAVEKVSDFFSWVFSHNWQPGRKR 60
          MDFPLSPLNRHHSSHLIQRWRCLQDQPSMYCGPTDNLAVEKVSDFFSWVFSHNWQPGRKR
Sbjct: 1  MDFPLSPLNRHHSSHLIQRWRCLQDQPSMYCGPTDNLAVEKVSDFFSWVFSHNWQPGRKR 60

Query: 61 IVSSFFRYENRLERDTEIFVVKLNAGIPGWEIWL 95
          IVSSFFRYENRLERDTEIFVVKLNAGIPGWEIWL
Sbjct: 61 IVSSFFRYENRLERDTEIFVVKLNAGIPGWEIWL 94

[Close]
BLAST of Csa3G816130 vs. NCBI nr
Match: gi|700204267|gb|KGN59400.1| (hypothetical protein Csa_3G816130 [Cucumis sativus])

HSP 1 Score: 207.6 bits (527), Expect = 9.5e-51
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 1 

Query: 1  MDFPLSPLNRHHSSHLIQRWRCLQDQPSMYCGPTDNLAVEKVSDFFSWVFSHNWQPGRKR 60
          MDFPLSPLNRHHSSHLIQRWRCLQDQPSMYCGPTDNLAVEKVSDFFSWVFSHNWQPGRKR
Sbjct: 1  MDFPLSPLNRHHSSHLIQRWRCLQDQPSMYCGPTDNLAVEKVSDFFSWVFSHNWQPGRKR 60

Query: 61 IVSSFFRYENRLERDTEIFVVKLNAGIPGWEIWL 95
          IVSSFFRYENRLERDTEIFVVKLNAGIPGWEIWL
Sbjct: 61 IVSSFFRYENRLERDTEIFVVKLNAGIPGWEIWL 94

The following BLAST results are available for this feature:
BLAST of Csa3G816130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBJ9_CUCSA6.6e-51100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G816130 PE=4 SV=1[more]
BLAST of Csa3G816130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700204267|gb|KGN59400.1|9.5e-51100.00hypothetical protein Csa_3G816130 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G816130.1Csa3G816130.1mRNA