Csa3G816010 (gene) Cucumber (Chinese Long) v2

NameCsa3G816010
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 31536014 .. 31536714 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTTCGAGTTCCAATCACACCACCACCAGCCACATTCTCAACCAAGTTCTATCTCATAGAGAAAAGGTCCATCAGTTCGTAGTTGCATTGCAATTATGAGCTAGTCCAAAAATTAAACCTCAAGTTACATAATTGTGAAAATTATAAAATCGTAAAAATTTAAAGGTTCAATCAAATTTTTTACTATTTGGGAGTGTTAACAATTTTAACAGGTATAATTACAATTACTACATGTTACAACAATGGCATGAAATAGTTTCATGCTGTAATGAGAAGAATCACAACCATAAAAACACCAAAATACATATTCTATAAGGACTACACAAGGGGATAGTTGCAAATTTAGCAATTAAATTCAAATTAATTAAGTATATAACACAATTTTAAAAAATTTACAAATATAACAAAATTTGTCAAATTCTATCACTGATATACCATATGAAGTCTATCAGCGATACAAGTCTATCAGCGATACAAATCTATCAGTGATAGTTTTGCTATATTTGCAATTTTTTAAAAATGTTGTTATATCCTTAATTATTGTTGCTAAAATAGTCATCCATGACAATTTTCCATTTATTTTCTGTTTTCAGGATAACAAAAGCCCAAGAGTTAAGAAGTGGAAGACATGGAGCAAGGCTTCAGATCACACAAAAAATTGGCAGACTTTACAACAGGGGTGCATGTGGAAATTCTAG

mRNA sequence

ATGCGTTCGAGTTCCAATCACACCACCACCAGCCACATTCTCAACCAAGTTCTATCTCATAGAGAAAAGGATAACAAAAGCCCAAGAGTTAAGAAGTGGAAGACATGGAGCAAGGCTTCAGATCACACAAAAAATTGGCAGACTTTACAACAGGGGTGCATGTGGAAATTCTAG

Coding sequence (CDS)

ATGCGTTCGAGTTCCAATCACACCACCACCAGCCACATTCTCAACCAAGTTCTATCTCATAGAGAAAAGGATAACAAAAGCCCAAGAGTTAAGAAGTGGAAGACATGGAGCAAGGCTTCAGATCACACAAAAAATTGGCAGACTTTACAACAGGGGTGCATGTGGAAATTCTAG

Protein sequence

MRSSSNHTTTSHILNQVLSHREKDNKSPRVKKWKTWSKASDHTKNWQTLQQGCMWKF*
BLAST of Csa3G816010 vs. TrEMBL
Match: A0A0A0LC49_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G816010 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.1e-27
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1

Query: 1  MRSSSNHTTTSHILNQVLSHREKDNKSPRVKKWKTWSKASDHTKNWQTLQQGCMWKF 58
          MRSSSNHTTTSHILNQVLSHREKDNKSPRVKKWKTWSKASDHTKNWQTLQQGCMWKF
Sbjct: 1  MRSSSNHTTTSHILNQVLSHREKDNKSPRVKKWKTWSKASDHTKNWQTLQQGCMWKF 57

BLAST of Csa3G816010 vs. NCBI nr
Match: gi|700204255|gb|KGN59388.1| (hypothetical protein Csa_3G816010 [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 5.9e-27
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1

Query: 1  MRSSSNHTTTSHILNQVLSHREKDNKSPRVKKWKTWSKASDHTKNWQTLQQGCMWKF 58
          MRSSSNHTTTSHILNQVLSHREKDNKSPRVKKWKTWSKASDHTKNWQTLQQGCMWKF
Sbjct: 1  MRSSSNHTTTSHILNQVLSHREKDNKSPRVKKWKTWSKASDHTKNWQTLQQGCMWKF 57

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LC49_CUCSA4.1e-27100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G816010 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700204255|gb|KGN59388.1|5.9e-27100.00hypothetical protein Csa_3G816010 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU175541cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G816010.1Csa3G816010.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU175541CU175541transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None