Csa3G740200 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G740200
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 28657724 .. 28658201 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAGGGGAATAACATGAAGTTGAAAGAACAGATGTCTAATTCACGGAAATACAGAGGCAGTGAGTTTGGTCAAAAAGCGTCAACAGCGAGCTTGGGACGTGTTTTCATCAATGAAAACTCAATGGTCAAGACGATTGGCAAGATCAGATTCTTCCAACTACTCTTTCGTTTCAAGTTAGAAACTTGAAAAACATTTCTTGGAGGATCTATGAATTTGAATGCTAAAATGGCAAGGAAGTAGGGTTCTGTTGGTTCTGAATCAGACAAGATGATGCCAAAGAGATCAAAACCACAGTAACGAAAGAGGTAAAAAGAAGCGAAGACTTGAATACATTTCTCAGACATTCCATAAACAAACCAGAAAATCTAAACCAATCATAATCTAACAGCCCGATCTCCAACGAGTTAAATGCCCTTCTGAAGCTCACTTTCACTCATCTCTTACACATTTGATTATTCTAATCTGGCACTGA

mRNA sequence

ATGGGGAAGGGGAATAACATGAAGTTGAAAGAACAGATGTCTAATTCACGGAAATACAGAGGCAGTGAGTTTGGTCAAAAAGCGTCAACAGCGAGCTTGGGACGTGTTTTCATCAATGAAAACTCAATGGTCAAGACGATTGGCAAGATCAGATTCTTCCAACTACTCTTTCGTTTCAAACAAGATGATGCCAAAGAGATCAAAACCACAGTAACGAAAGAGCCCGATCTCCAACGAGTTAAATGCCCTTCTGAAGCTCACTTTCACTCATCTCTTACACATTTGATTATTCTAATCTGGCACTGA

Coding sequence (CDS)

ATGGGGAAGGGGAATAACATGAAGTTGAAAGAACAGATGTCTAATTCACGGAAATACAGAGGCAGTGAGTTTGGTCAAAAAGCGTCAACAGCGAGCTTGGGACGTGTTTTCATCAATGAAAACTCAATGGTCAAGACGATTGGCAAGATCAGATTCTTCCAACTACTCTTTCGTTTCAAACAAGATGATGCCAAAGAGATCAAAACCACAGTAACGAAAGAGCCCGATCTCCAACGAGTTAAATGCCCTTCTGAAGCTCACTTTCACTCATCTCTTACACATTTGATTATTCTAATCTGGCACTGA

Protein sequence

MGKGNNMKLKEQMSNSRKYRGSEFGQKASTASLGRVFINENSMVKTIGKIRFFQLLFRFKQDDAKEIKTTVTKEPDLQRVKCPSEAHFHSSLTHLIILIWH*
Homology
[Close]
BLAST of Csa3G740200 vs. TrEMBL
Match: A0A0A0LE18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G740200 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 2.7e-50
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MGKGNNMKLKEQMSNSRKYRGSEFGQKASTASLGRVFINENSMVKTIGKIRFFQLLFRFK 60
           MGKGNNMKLKEQMSNSRKYRGSEFGQKASTASLGRVFINENSMVKTIGKIRFFQLLFRFK
Sbjct: 1   MGKGNNMKLKEQMSNSRKYRGSEFGQKASTASLGRVFINENSMVKTIGKIRFFQLLFRFK 60

Query: 61  QDDAKEIKTTVTKEPDLQRVKCPSEAHFHSSLTHLIILIWH 102
           QDDAKEIKTTVTKEPDLQRVKCPSEAHFHSSLTHLIILIWH
Sbjct: 61  QDDAKEIKTTVTKEPDLQRVKCPSEAHFHSSLTHLIILIWH 101

[Close]
BLAST of Csa3G740200 vs. NCBI nr
Match: gi|700203844|gb|KGN58977.1| (hypothetical protein Csa_3G740200 [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 3.9e-50
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MGKGNNMKLKEQMSNSRKYRGSEFGQKASTASLGRVFINENSMVKTIGKIRFFQLLFRFK 60
           MGKGNNMKLKEQMSNSRKYRGSEFGQKASTASLGRVFINENSMVKTIGKIRFFQLLFRFK
Sbjct: 1   MGKGNNMKLKEQMSNSRKYRGSEFGQKASTASLGRVFINENSMVKTIGKIRFFQLLFRFK 60

Query: 61  QDDAKEIKTTVTKEPDLQRVKCPSEAHFHSSLTHLIILIWH 102
           QDDAKEIKTTVTKEPDLQRVKCPSEAHFHSSLTHLIILIWH
Sbjct: 61  QDDAKEIKTTVTKEPDLQRVKCPSEAHFHSSLTHLIILIWH 101

The following BLAST results are available for this feature:
BLAST of Csa3G740200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LE18_CUCSA2.7e-50100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G740200 PE=4 SV=1[more]
BLAST of Csa3G740200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203844|gb|KGN58977.1|3.9e-50100.00hypothetical protein Csa_3G740200 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G740200.1Csa3G740200.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G740200CsGy3G031050Cucumber (Gy14) v2cgybcuB111
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G740200Cucurbita maxima (Rimu)cmacuB240
Csa3G740200Cucurbita maxima (Rimu)cmacuB547
Csa3G740200Cucurbita maxima (Rimu)cmacuB660
Csa3G740200Cucurbita maxima (Rimu)cmacuB815
Csa3G740200Cucurbita maxima (Rimu)cmacuB856
Csa3G740200Cucurbita moschata (Rifu)cmocuB227
Csa3G740200Cucurbita moschata (Rifu)cmocuB451
Csa3G740200Cucurbita moschata (Rifu)cmocuB536
Csa3G740200Cucurbita moschata (Rifu)cmocuB649
Csa3G740200Cucurbita moschata (Rifu)cmocuB807
Csa3G740200Melon (DHL92) v3.5.1cumeB224
Csa3G740200Melon (DHL92) v3.5.1cumeB261
Csa3G740200Watermelon (Charleston Gray)cuwcgB195
Csa3G740200Watermelon (Charleston Gray)cuwcgB212
Csa3G740200Watermelon (Charleston Gray)cuwcgB220
Csa3G740200Watermelon (Charleston Gray)cuwcgB261
Csa3G740200Watermelon (97103) v1cuwmB199
Csa3G740200Watermelon (97103) v1cuwmB265
Csa3G740200Watermelon (97103) v1cuwmB267
Csa3G740200Cucurbita pepo (Zucchini)cpecuB064
Csa3G740200Cucurbita pepo (Zucchini)cpecuB480
Csa3G740200Cucurbita pepo (Zucchini)cpecuB598
Csa3G740200Cucurbita pepo (Zucchini)cpecuB860
Csa3G740200Bottle gourd (USVL1VR-Ls)culsiB161
Csa3G740200Bottle gourd (USVL1VR-Ls)culsiB168
Csa3G740200Bottle gourd (USVL1VR-Ls)culsiB187
Csa3G740200Cucumber (Gy14) v2cgybcuB254
Csa3G740200Cucumber (Gy14) v2cgybcuB259
Csa3G740200Melon (DHL92) v3.6.1cumedB166
Csa3G740200Melon (DHL92) v3.6.1cumedB209
Csa3G740200Melon (DHL92) v3.6.1cumedB251
Csa3G740200Silver-seed gourdcarcuB0175
Csa3G740200Silver-seed gourdcarcuB0277
Csa3G740200Silver-seed gourdcarcuB0474
Csa3G740200Watermelon (97103) v2cuwmbB187
Csa3G740200Watermelon (97103) v2cuwmbB195
Csa3G740200Watermelon (97103) v2cuwmbB202
Csa3G740200Watermelon (97103) v2cuwmbB247
Csa3G740200Wax gourdcuwgoB235
Csa3G740200Wax gourdcuwgoB317
Csa3G740200Wax gourdcuwgoB329
Csa3G740200Cucumber (Chinese Long) v2cucuB109
Csa3G740200Cucumber (Chinese Long) v2cucuB115
Csa3G740200Cucumber (Gy14) v1cgycuB166
Csa3G740200Cucumber (Gy14) v1cgycuB539
Csa3G740200Cucumber (Gy14) v1cgycuB436