Csa3G664040 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G664040
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 25938715 .. 25939026 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGGTCATTGGGCTATTTGGCCCGACTTGCCCACCTCGATCGACTTCGAAGGTCAAGAAACGATCCAATCCACTTAGTTGATCCAAATTTTCATTTCCTAATACCTCTTGGATTTAGAACCCAACCATAGTCCATCTCACTATAAATAAGGAGTCATAGAGGACACCTACGGGGAGTTCTTCTACCCATTTCTAGCTTGCCCCGACCCTTTGATGAATACTAACTTGAGCATCGAAAGTTCTATGACAAGCACCACACTGGTGTTTTCACTTTTTATCCTGTTGGTCGTCTTCCTTTCCCAAAATTAA

mRNA sequence

ATGAGAGGTCATTGGGCTATTTGGCCCGACTTGCCCACCTCGATCGACTTCGAAGGAGTCATAGAGGACACCTACGGGGAGTTCTTCTACCCATTTCTAGCTTGCCCCGACCCTTTGATGAATACTAACTTGAGCATCGAAAGTTCTATGACAAGCACCACACTGGTGTTTTCACTTTTTATCCTGTTGGTCGTCTTCCTTTCCCAAAATTAA

Coding sequence (CDS)

ATGAGAGGTCATTGGGCTATTTGGCCCGACTTGCCCACCTCGATCGACTTCGAAGGAGTCATAGAGGACACCTACGGGGAGTTCTTCTACCCATTTCTAGCTTGCCCCGACCCTTTGATGAATACTAACTTGAGCATCGAAAGTTCTATGACAAGCACCACACTGGTGTTTTCACTTTTTATCCTGTTGGTCGTCTTCCTTTCCCAAAATTAA

Protein sequence

MRGHWAIWPDLPTSIDFEGVIEDTYGEFFYPFLACPDPLMNTNLSIESSMTSTTLVFSLFILLVVFLSQN*
Homology
[Close]
BLAST of Csa3G664040 vs. TrEMBL
Match: A0A0A0LC95_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G664040 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.6e-33
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1 

Query: 1  MRGHWAIWPDLPTSIDFEGVIEDTYGEFFYPFLACPDPLMNTNLSIESSMTSTTLVFSLF 60
          MRGHWAIWPDLPTSIDFEGVIEDTYGEFFYPFLACPDPLMNTNLSIESSMTSTTLVFSLF
Sbjct: 1  MRGHWAIWPDLPTSIDFEGVIEDTYGEFFYPFLACPDPLMNTNLSIESSMTSTTLVFSLF 60

Query: 61 ILLVVFLSQN 71
          ILLVVFLSQN
Sbjct: 61 ILLVVFLSQN 70

[Close]
BLAST of Csa3G664040 vs. NCBI nr
Match: gi|700203396|gb|KGN58529.1| (hypothetical protein Csa_3G664040 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 5.1e-33
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1 

Query: 1  MRGHWAIWPDLPTSIDFEGVIEDTYGEFFYPFLACPDPLMNTNLSIESSMTSTTLVFSLF 60
          MRGHWAIWPDLPTSIDFEGVIEDTYGEFFYPFLACPDPLMNTNLSIESSMTSTTLVFSLF
Sbjct: 1  MRGHWAIWPDLPTSIDFEGVIEDTYGEFFYPFLACPDPLMNTNLSIESSMTSTTLVFSLF 60

Query: 61 ILLVVFLSQN 71
          ILLVVFLSQN
Sbjct: 61 ILLVVFLSQN 70

The following BLAST results are available for this feature:
BLAST of Csa3G664040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC95_CUCSA3.6e-33100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G664040 PE=4 SV=1[more]
BLAST of Csa3G664040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203396|gb|KGN58529.1|5.1e-33100.00hypothetical protein Csa_3G664040 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G664040.1Csa3G664040.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G664040Cucumber (Gy14) v2cgybcuB111
Csa3G664040Melon (DHL92) v3.6.1cumedB175
Csa3G664040Melon (DHL92) v3.6.1cumedB193
Csa3G664040Silver-seed gourdcarcuB0483
Csa3G664040Silver-seed gourdcarcuB0777
Csa3G664040Silver-seed gourdcarcuB0779
Csa3G664040Silver-seed gourdcarcuB0829
Csa3G664040Silver-seed gourdcarcuB0830
Csa3G664040Watermelon (97103) v2cuwmbB188
Csa3G664040Wax gourdcuwgoB221
Csa3G664040Wax gourdcuwgoB243
Csa3G664040Cucumber (Chinese Long) v2cucuB127
Csa3G664040Cucumber (Gy14) v1cgycuB294
Csa3G664040Cucurbita maxima (Rimu)cmacuB241
Csa3G664040Cucurbita maxima (Rimu)cmacuB256
Csa3G664040Cucurbita maxima (Rimu)cmacuB450
Csa3G664040Cucurbita maxima (Rimu)cmacuB453
Csa3G664040Cucurbita maxima (Rimu)cmacuB886
Csa3G664040Cucurbita moschata (Rifu)cmocuB228
Csa3G664040Cucurbita moschata (Rifu)cmocuB241
Csa3G664040Cucurbita moschata (Rifu)cmocuB437
Csa3G664040Cucurbita moschata (Rifu)cmocuB440
Csa3G664040Cucurbita moschata (Rifu)cmocuB873
Csa3G664040Melon (DHL92) v3.5.1cumeB189
Csa3G664040Melon (DHL92) v3.5.1cumeB207
Csa3G664040Watermelon (Charleston Gray)cuwcgB190
Csa3G664040Watermelon (Charleston Gray)cuwcgB196
Csa3G664040Watermelon (97103) v1cuwmB193
Csa3G664040Watermelon (97103) v1cuwmB203
Csa3G664040Cucurbita pepo (Zucchini)cpecuB545
Csa3G664040Cucurbita pepo (Zucchini)cpecuB562
Csa3G664040Cucurbita pepo (Zucchini)cpecuB599
Csa3G664040Cucurbita pepo (Zucchini)cpecuB612
Csa3G664040Bottle gourd (USVL1VR-Ls)culsiB172
Csa3G664040Bottle gourd (USVL1VR-Ls)culsiB188