Csa3G653970 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G653970
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 25821803 .. 25822378 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTACCAAAAATAAATGACAGCTTTAATTCTGAAATTGGCCTAAAAGAACGAGTGGGAGTTGATGGTGGAGGGATACAGGTAACTGACACCAACTTTGTTTCCAATTGTATTCGAACCTAATTGGAGAATCTTTTCTGTTCAAATTCATAAATTATGTTTTCTTTTTCTTTTTCCTTTTATTGAATAACAAAAGAAATACTCTTGAAAATTGATTACTAAACTTTGGAAAGTTTTGGTTTAATCCTCAATGTTTAAATTAAAGTTTGAGCTTTGGTAGACTTTTGTTGTTAAATACATGGACATGTTTTTTTAGTGAACAGATCGAGACACATACAGAAAGTAAATTTCTGTATTACAATTAGGAAAGAATTTGTTACGTTATGCAAAGCCCCACCTATAATTTGTACGTATGAGAGAGGCGCAAGAGTCAAATCACAAGCAGTAGAATCAAGGAAATTGTTGGAGAAGGAAGGTACGAATCAGGGTGATGATCAAGGCAAGGACCACGGAATACATAAAGGGGTTGTAAGTAGGAGGAGTTTGGCAGATGAAGTCAATGTGGAGATTTTGTAG

mRNA sequence

ATGTTACCAAAAATAAATGACAGCTTTAATTCTGAAATTGGCCTAAAAGAACGAGTGGGAGTTGATGGTGGAGGGATACAGAGAGGCGCAAGAGTCAAATCACAAGCAGTAGAATCAAGGAAATTGTTGGAGAAGGAAGGTACGAATCAGGGTGATGATCAAGGCAAGGACCACGGAATACATAAAGGGGTTGTAAGTAGGAGGAGTTTGGCAGATGAAGTCAATGTGGAGATTTTGTAG

Coding sequence (CDS)

ATGTTACCAAAAATAAATGACAGCTTTAATTCTGAAATTGGCCTAAAAGAACGAGTGGGAGTTGATGGTGGAGGGATACAGAGAGGCGCAAGAGTCAAATCACAAGCAGTAGAATCAAGGAAATTGTTGGAGAAGGAAGGTACGAATCAGGGTGATGATCAAGGCAAGGACCACGGAATACATAAAGGGGTTGTAAGTAGGAGGAGTTTGGCAGATGAAGTCAATGTGGAGATTTTGTAG

Protein sequence

MLPKINDSFNSEIGLKERVGVDGGGIQRGARVKSQAVESRKLLEKEGTNQGDDQGKDHGIHKGVVSRRSLADEVNVEIL*
Homology
[Close]
BLAST of Csa3G653970 vs. TrEMBL
Match: A0A0A0LEP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G653970 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 6.6e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1 

Query: 1  MLPKINDSFNSEIGLKERVGVDGGGIQRGARVKSQAVESRKLLEKEGTNQGDDQGKDHGI 60
          MLPKINDSFNSEIGLKERVGVDGGGIQRGARVKSQAVESRKLLEKEGTNQGDDQGKDHGI
Sbjct: 1  MLPKINDSFNSEIGLKERVGVDGGGIQRGARVKSQAVESRKLLEKEGTNQGDDQGKDHGI 60

Query: 61 HKGVVSRRSLADEVNVEIL 80
          HKGVVSRRSLADEVNVEIL
Sbjct: 61 HKGVVSRRSLADEVNVEIL 79

[Close]
BLAST of Csa3G653970 vs. NCBI nr
Match: gi|700203383|gb|KGN58516.1| (hypothetical protein Csa_3G653970 [Cucumis sativus])

HSP 1 Score: 157.5 bits (397), Expect = 9.5e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1 

Query: 1  MLPKINDSFNSEIGLKERVGVDGGGIQRGARVKSQAVESRKLLEKEGTNQGDDQGKDHGI 60
          MLPKINDSFNSEIGLKERVGVDGGGIQRGARVKSQAVESRKLLEKEGTNQGDDQGKDHGI
Sbjct: 1  MLPKINDSFNSEIGLKERVGVDGGGIQRGARVKSQAVESRKLLEKEGTNQGDDQGKDHGI 60

Query: 61 HKGVVSRRSLADEVNVEIL 80
          HKGVVSRRSLADEVNVEIL
Sbjct: 61 HKGVVSRRSLADEVNVEIL 79

The following BLAST results are available for this feature:
BLAST of Csa3G653970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEP2_CUCSA6.6e-36100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G653970 PE=4 SV=1[more]
BLAST of Csa3G653970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203383|gb|KGN58516.1|9.5e-36100.00hypothetical protein Csa_3G653970 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G653970.1Csa3G653970.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G653970Watermelon (97103) v2cuwmbB188
Csa3G653970Watermelon (97103) v2cuwmbB239
Csa3G653970Wax gourdcuwgoB243
Csa3G653970Cucumber (Gy14) v1cgycuB294
Csa3G653970Cucurbita maxima (Rimu)cmacuB243
Csa3G653970Cucurbita maxima (Rimu)cmacuB241
Csa3G653970Cucurbita maxima (Rimu)cmacuB256
Csa3G653970Cucurbita maxima (Rimu)cmacuB450
Csa3G653970Cucurbita maxima (Rimu)cmacuB453
Csa3G653970Cucurbita moschata (Rifu)cmocuB230
Csa3G653970Cucurbita moschata (Rifu)cmocuB228
Csa3G653970Cucurbita moschata (Rifu)cmocuB241
Csa3G653970Cucurbita moschata (Rifu)cmocuB437
Csa3G653970Cucurbita moschata (Rifu)cmocuB440
Csa3G653970Melon (DHL92) v3.5.1cumeB229
Csa3G653970Watermelon (Charleston Gray)cuwcgB190
Csa3G653970Watermelon (Charleston Gray)cuwcgB196
Csa3G653970Watermelon (Charleston Gray)cuwcgB253
Csa3G653970Watermelon (97103) v1cuwmB193
Csa3G653970Watermelon (97103) v1cuwmB203
Csa3G653970Watermelon (97103) v1cuwmB218
Csa3G653970Cucurbita pepo (Zucchini)cpecuB545
Csa3G653970Cucurbita pepo (Zucchini)cpecuB562
Csa3G653970Cucurbita pepo (Zucchini)cpecuB599
Csa3G653970Cucurbita pepo (Zucchini)cpecuB612
Csa3G653970Bottle gourd (USVL1VR-Ls)culsiB188
Csa3G653970Bottle gourd (USVL1VR-Ls)culsiB233
Csa3G653970Cucumber (Gy14) v2cgybcuB111
Csa3G653970Melon (DHL92) v3.6.1cumedB215
Csa3G653970Silver-seed gourdcarcuB0125
Csa3G653970Silver-seed gourdcarcuB0777
Csa3G653970Silver-seed gourdcarcuB0779
Csa3G653970Silver-seed gourdcarcuB0829
Csa3G653970Silver-seed gourdcarcuB0830