Csa3G651870 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G651870
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 25716427 .. 25716634 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCCATTGAGCTAACTGGCTTGTGTCGCCTGCTCCAGAAAAAGCCAACAATTTGGGTAAATTTTCGATTGTTGGATTGGGAGATTGACAAAGCTTGTACTTGAGATTATAAGAGGCTGCTCATCAGGTGATAAACTGAACAGGCAGCAGGCGGATAGGAAGGACGAACATTCTTCTCTAGGGCTTTCCTCAGGTGTTGTGTAA

mRNA sequence

ATGGCGGCCATTGAGCTAACTGGCTTGTGTCGCCTGCTCCAGAAAAAGCCAACAATTTGGGTAAATTTTCGATTGTTGGATTGGGAGATTGACAAAGCTTGTGATAAACTGAACAGGCAGCAGGCGGATAGGAAGGACGAACATTCTTCTCTAGGGCTTTCCTCAGGTGTTGTGTAA

Coding sequence (CDS)

ATGGCGGCCATTGAGCTAACTGGCTTGTGTCGCCTGCTCCAGAAAAAGCCAACAATTTGGGTAAATTTTCGATTGTTGGATTGGGAGATTGACAAAGCTTGTGATAAACTGAACAGGCAGCAGGCGGATAGGAAGGACGAACATTCTTCTCTAGGGCTTTCCTCAGGTGTTGTGTAA

Protein sequence

MAAIELTGLCRLLQKKPTIWVNFRLLDWEIDKACDKLNRQQADRKDEHSSLGLSSGVV*
Homology
[Close]
BLAST of Csa3G651870 vs. TrEMBL
Match: A0A0A0L9M8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G651870 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 3.9e-25
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 1  MAAIELTGLCRLLQKKPTIWVNFRLLDWEIDKACDKLNRQQADRKDEHSSLGLSSGVV 59
          MAAIELTGLCRLLQKKPTIWVNFRLLDWEIDKACDKLNRQQADRKDEHSSLGLSSGVV
Sbjct: 1  MAAIELTGLCRLLQKKPTIWVNFRLLDWEIDKACDKLNRQQADRKDEHSSLGLSSGVV 58

[Close]
BLAST of Csa3G651870 vs. NCBI nr
Match: gi|700203370|gb|KGN58503.1| (hypothetical protein Csa_3G651870 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 5.6e-25
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 1  MAAIELTGLCRLLQKKPTIWVNFRLLDWEIDKACDKLNRQQADRKDEHSSLGLSSGVV 59
          MAAIELTGLCRLLQKKPTIWVNFRLLDWEIDKACDKLNRQQADRKDEHSSLGLSSGVV
Sbjct: 1  MAAIELTGLCRLLQKKPTIWVNFRLLDWEIDKACDKLNRQQADRKDEHSSLGLSSGVV 58

The following BLAST results are available for this feature:
BLAST of Csa3G651870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9M8_CUCSA3.9e-25100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G651870 PE=4 SV=1[more]
BLAST of Csa3G651870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203370|gb|KGN58503.1|5.6e-25100.00hypothetical protein Csa_3G651870 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G651870.1Csa3G651870.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G651870CsGy3G026830Cucumber (Gy14) v2cgybcuB111
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G651870Watermelon (97103) v2cuwmbB239
Csa3G651870Wax gourdcuwgoB288
Csa3G651870Cucumber (Gy14) v1cgycuB294
Csa3G651870Cucurbita maxima (Rimu)cmacuB243
Csa3G651870Cucurbita maxima (Rimu)cmacuB447
Csa3G651870Cucurbita maxima (Rimu)cmacuB453
Csa3G651870Cucurbita moschata (Rifu)cmocuB230
Csa3G651870Cucurbita moschata (Rifu)cmocuB228
Csa3G651870Cucurbita moschata (Rifu)cmocuB434
Csa3G651870Melon (DHL92) v3.5.1cumeB216
Csa3G651870Watermelon (Charleston Gray)cuwcgB253
Csa3G651870Watermelon (97103) v1cuwmB218
Csa3G651870Cucurbita pepo (Zucchini)cpecuB545
Csa3G651870Cucurbita pepo (Zucchini)cpecuB559
Csa3G651870Bottle gourd (USVL1VR-Ls)culsiB233
Csa3G651870Melon (DHL92) v3.6.1cumedB214
Csa3G651870Silver-seed gourdcarcuB0125
Csa3G651870Silver-seed gourdcarcuB0223
Csa3G651870Silver-seed gourdcarcuB0829