Csa3G610780 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G610780
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 23674635 .. 23675067 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGATCGGAGTTTAAATGTTCATGACTCTGGAGGCGACAGGTGGACGGGGCAGAGGAGGAATGGCGAAATCTTAGATGGTTTTGGTGAAGTTTATTGATTTTGCTTAATATGCTGAGACCACCAAGCCTTCCTCTACATTTCTTCCCTCCAGAATTCAAAATTGCGTAATCTTAGTCTCTCTCTCTCTCTTTCTGTACTTATTTGCTAAAAAACGTAATTGTTAAAGTTTCTTGCTCTATACAGATTTGGATACAGAGGATTCAGGACAATGCTAATCAAAGGTACATAAGATGGTGAATTAGAGTTCATAAGTTTTGTTGACTATTTTCTTTTAGAACATGGGGATTGATTTACTCTGTTTGGGAAATATTGTCAGAGATGTGGAAGAATATGAGGGTTTAAAAGCTAAATCTCAAGATGAGATCTGA

mRNA sequence

ATGTTTGATCGGAGTTTAAATGTTCATGACTCTGGAGGCGACAGGTGGACGGGGCAGAGGAGGAATGGCGAAATCTTAGATGGTTTTGGTGAAATTTGGATACAGAGGATTCAGGACAATGCTAATCAAAGAGATGTGGAAGAATATGAGGGTTTAAAAGCTAAATCTCAAGATGAGATCTGA

Coding sequence (CDS)

ATGTTTGATCGGAGTTTAAATGTTCATGACTCTGGAGGCGACAGGTGGACGGGGCAGAGGAGGAATGGCGAAATCTTAGATGGTTTTGGTGAAATTTGGATACAGAGGATTCAGGACAATGCTAATCAAAGAGATGTGGAAGAATATGAGGGTTTAAAAGCTAAATCTCAAGATGAGATCTGA

Protein sequence

MFDRSLNVHDSGGDRWTGQRRNGEILDGFGEIWIQRIQDNANQRDVEEYEGLKAKSQDEI*
Homology
[Close]
BLAST of Csa3G610780 vs. TrEMBL
Match: A0A0A0LC70_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G610780 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.5e-27
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1 

Query: 1  MFDRSLNVHDSGGDRWTGQRRNGEILDGFGEIWIQRIQDNANQRDVEEYEGLKAKSQDEI 60
          MFDRSLNVHDSGGDRWTGQRRNGEILDGFGEIWIQRIQDNANQRDVEEYEGLKAKSQDEI
Sbjct: 1  MFDRSLNVHDSGGDRWTGQRRNGEILDGFGEIWIQRIQDNANQRDVEEYEGLKAKSQDEI 60

[Close]
BLAST of Csa3G610780 vs. NCBI nr
Match: gi|700203169|gb|KGN58302.1| (hypothetical protein Csa_3G610780 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 3.6e-27
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1 

Query: 1  MFDRSLNVHDSGGDRWTGQRRNGEILDGFGEIWIQRIQDNANQRDVEEYEGLKAKSQDEI 60
          MFDRSLNVHDSGGDRWTGQRRNGEILDGFGEIWIQRIQDNANQRDVEEYEGLKAKSQDEI
Sbjct: 1  MFDRSLNVHDSGGDRWTGQRRNGEILDGFGEIWIQRIQDNANQRDVEEYEGLKAKSQDEI 60

The following BLAST results are available for this feature:
BLAST of Csa3G610780 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC70_CUCSA2.5e-27100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G610780 PE=4 SV=1[more]
BLAST of Csa3G610780 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203169|gb|KGN58302.1|3.6e-27100.00hypothetical protein Csa_3G610780 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G610780.1Csa3G610780.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G610780CSPI03G26850Wild cucumber (PI 183967)cpicuB120
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G610780Melon (DHL92) v3.6.1cumedB210
Csa3G610780Melon (DHL92) v3.6.1cumedB218
Csa3G610780Melon (DHL92) v3.6.1cumedB244
Csa3G610780Silver-seed gourdcarcuB0263
Csa3G610780Silver-seed gourdcarcuB0767
Csa3G610780Silver-seed gourdcarcuB0796
Csa3G610780Silver-seed gourdcarcuB1092
Csa3G610780Watermelon (97103) v2cuwmbB225
Csa3G610780Watermelon (97103) v2cuwmbB228
Csa3G610780Watermelon (97103) v2cuwmbB235
Csa3G610780Wax gourdcuwgoB306
Csa3G610780Cucumber (Chinese Long) v2cucuB060
Csa3G610780Cucumber (Chinese Long) v2cucuB090
Csa3G610780Cucumber (Gy14) v1cgycuB204
Csa3G610780Cucumber (Gy14) v1cgycuB365
Csa3G610780Cucurbita maxima (Rimu)cmacuB251
Csa3G610780Cucurbita maxima (Rimu)cmacuB509
Csa3G610780Cucurbita maxima (Rimu)cmacuB600
Csa3G610780Cucurbita maxima (Rimu)cmacuB893
Csa3G610780Cucurbita moschata (Rifu)cmocuB236
Csa3G610780Cucurbita moschata (Rifu)cmocuB500
Csa3G610780Cucurbita moschata (Rifu)cmocuB590
Csa3G610780Melon (DHL92) v3.5.1cumeB225
Csa3G610780Melon (DHL92) v3.5.1cumeB253
Csa3G610780Watermelon (Charleston Gray)cuwcgB240
Csa3G610780Watermelon (Charleston Gray)cuwcgB251
Csa3G610780Watermelon (97103) v1cuwmB228
Csa3G610780Watermelon (97103) v1cuwmB253
Csa3G610780Watermelon (97103) v1cuwmB277
Csa3G610780Cucurbita pepo (Zucchini)cpecuB238
Csa3G610780Cucurbita pepo (Zucchini)cpecuB608
Csa3G610780Cucurbita pepo (Zucchini)cpecuB716
Csa3G610780Cucurbita pepo (Zucchini)cpecuB858
Csa3G610780Bottle gourd (USVL1VR-Ls)culsiB157
Csa3G610780Bottle gourd (USVL1VR-Ls)culsiB200
Csa3G610780Bottle gourd (USVL1VR-Ls)culsiB203
Csa3G610780Cucumber (Gy14) v2cgybcuB111
Csa3G610780Cucumber (Gy14) v2cgybcuB121