Csa3G601020 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G601020
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 23295982 .. 23296257 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCGCCGTTGCTATGCCATTGGCCCCGCGGAAATCTCTCTCTTCTTTCCCCCTTTGCTTTCCATTTACCCAATTTCTTCCTTTCCTTACTTCTTCTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTTCTTCTTCTTCTTTCTTCTTCTTCTCTTTCTTCTTCACGTACCCACATTGAATCCTTCACATTCAATTCAAACCCCCATTCAATGCTCTCTCTATTTCACAAACCTCCATTCGCCTGCATTTCTCTCTGTTCTTTCATCTTTCAATGA

mRNA sequence

ATGGGCGCCGTTGCTATGCCATTGGCCCCGCGGAAATCTCTCTCTTCTTTCCCCCTTTGCTTTCCATTTACCCAATTTCTTCCTTTCCTTACTTCTTCTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTTCTTCTTCTTCTTTCTTCTTCTTCTCTTTCTTCTTCACGTACCCACATTGAATCCTTCACATTCAATTCAAACCCCCATTCAATGCTCTCTCTATTTCACAAACCTCCATTCGCCTGCATTTCTCTCTGTTCTTTCATCTTTCAATGA

Coding sequence (CDS)

ATGGGCGCCGTTGCTATGCCATTGGCCCCGCGGAAATCTCTCTCTTCTTTCCCCCTTTGCTTTCCATTTACCCAATTTCTTCCTTTCCTTACTTCTTCTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTTCTTCTTCTTCTTTCTTCTTCTTCTCTTTCTTCTTCACGTACCCACATTGAATCCTTCACATTCAATTCAAACCCCCATTCAATGCTCTCTCTATTTCACAAACCTCCATTCGCCTGCATTTCTCTCTGTTCTTTCATCTTTCAATGA

Protein sequence

MGAVAMPLAPRKSLSSFPLCFPFTQFLPFLTSSSSSSSFFFFFLLLLSSSSLSSSRTHIESFTFNSNPHSMLSLFHKPPFACISLCSFIFQ*
Homology
[Close]
BLAST of Csa3G601020 vs. TrEMBL
Match: A0A0A0L8T8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G601020 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 5.8e-44
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MGAVAMPLAPRKSLSSFPLCFPFTQFLPFLTSSSSSSSFFFFFLLLLSSSSLSSSRTHIE 60
          MGAVAMPLAPRKSLSSFPLCFPFTQFLPFLTSSSSSSSFFFFFLLLLSSSSLSSSRTHIE
Sbjct: 1  MGAVAMPLAPRKSLSSFPLCFPFTQFLPFLTSSSSSSSFFFFFLLLLSSSSLSSSRTHIE 60

Query: 61 SFTFNSNPHSMLSLFHKPPFACISLCSFIFQ 92
          SFTFNSNPHSMLSLFHKPPFACISLCSFIFQ
Sbjct: 61 SFTFNSNPHSMLSLFHKPPFACISLCSFIFQ 91

[Close]
BLAST of Csa3G601020 vs. NCBI nr
Match: gi|700203130|gb|KGN58263.1| (hypothetical protein Csa_3G601020 [Cucumis sativus])

HSP 1 Score: 184.5 bits (467), Expect = 8.4e-44
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MGAVAMPLAPRKSLSSFPLCFPFTQFLPFLTSSSSSSSFFFFFLLLLSSSSLSSSRTHIE 60
          MGAVAMPLAPRKSLSSFPLCFPFTQFLPFLTSSSSSSSFFFFFLLLLSSSSLSSSRTHIE
Sbjct: 1  MGAVAMPLAPRKSLSSFPLCFPFTQFLPFLTSSSSSSSFFFFFLLLLSSSSLSSSRTHIE 60

Query: 61 SFTFNSNPHSMLSLFHKPPFACISLCSFIFQ 92
          SFTFNSNPHSMLSLFHKPPFACISLCSFIFQ
Sbjct: 61 SFTFNSNPHSMLSLFHKPPFACISLCSFIFQ 91

The following BLAST results are available for this feature:
BLAST of Csa3G601020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8T8_CUCSA5.8e-44100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G601020 PE=4 SV=1[more]
BLAST of Csa3G601020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203130|gb|KGN58263.1|8.4e-44100.00hypothetical protein Csa_3G601020 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU143262cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G601020.1Csa3G601020.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU143262CU143262transcribed_cluster