Csa3G585950 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G585950
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein; contains IPR000082 (SEA domain)
LocationChr3 : 22483738 .. 22484396 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGTCATTACCCAAGTCAACAACTGCGACATAGCTATCATTGTAGTCTTTGTGATTATTGCAATTGTTGTCATTATTGTACGTGTTAGGAGTGTAAGAATATAGGTTGAACTCAAATAACCTGAACTACCTAACTTATATTATAAGGGTTGGATTAGGTTAAAGTGTGGATTGGGTTGGGTTTAAAAAATAGGATTTTTTCGAGTTGGATTGGGTTGGGTCTCGAGTTAGGGTTGAAAAATTCAGTTCAACCCAACCCAACCCGAATTAATATATATATATATATTATTTATTTAATAAGAAAAAAAATTACTAATTAGGTTTTCTCAGTTTACCTTTTCACTTCTCACGGCCCATGCAAAACCATCTTCTTAGTTCTCACGCAACACTTCACCTCATCTTCTCAGTTCTCACGTCGTCACACGACACTTCACCTCCAACTCTCCCTCGTGCACCGCAACATCTCTGACGTCTCCTTCGTCTCAGCTCTGTCTCTCCTCCTTCATCTTCTTTGTCAGGCCGATCTCAGATCTCAGTTCCTCAATCTCCTTCGATCTCATATCTCCTTTGTCTCCTTCGACATCTCCTCCAACTTCGACATCTCCAATCTTCAACATCTCTTATATTCCCCAAATCTCATATCTCCTTCGTCCTAG

mRNA sequence

ATGGTTGTCATTACCCAAGTCAACAACTGCGACATAGCTATCATTGTAGTCTTTGTGATTATTGCAATTGTTGTCATTATTTTCTCACGTCGTCACACGACACTTCACCTCCAACTCTCCCTCGTGCACCGCAACATCTCTGACGTCTCCTTCGTCTCAGCTCTGTCTCTCCTCCTTCATCTTCTTTGTCAGGCCGATCTCAGATCTCAGTTCCTCAATCTCCTTCGATCTCATATCTCCTTTGTCTCCTTCGACATCTCCTCCAACTTCGACATCTCCAATCTTCAACATCTCTTATATTCCCCAAATCTCATATCTCCTTCGTCCTAG

Coding sequence (CDS)

ATGGTTGTCATTACCCAAGTCAACAACTGCGACATAGCTATCATTGTAGTCTTTGTGATTATTGCAATTGTTGTCATTATTTTCTCACGTCGTCACACGACACTTCACCTCCAACTCTCCCTCGTGCACCGCAACATCTCTGACGTCTCCTTCGTCTCAGCTCTGTCTCTCCTCCTTCATCTTCTTTGTCAGGCCGATCTCAGATCTCAGTTCCTCAATCTCCTTCGATCTCATATCTCCTTTGTCTCCTTCGACATCTCCTCCAACTTCGACATCTCCAATCTTCAACATCTCTTATATTCCCCAAATCTCATATCTCCTTCGTCCTAG

Protein sequence

MVVITQVNNCDIAIIVVFVIIAIVVIIFSRRHTTLHLQLSLVHRNISDVSFVSALSLLLHLLCQADLRSQFLNLLRSHISFVSFDISSNFDISNLQHLLYSPNLISPSS*
Homology
[Close]
BLAST of Csa3G585950 vs. TrEMBL
Match: A0A0A0LB51_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G585950 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.6e-51
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1 

Query: 1   MVVITQVNNCDIAIIVVFVIIAIVVIIFSRRHTTLHLQLSLVHRNISDVSFVSALSLLLH 60
           MVVITQVNNCDIAIIVVFVIIAIVVIIFSRRHTTLHLQLSLVHRNISDVSFVSALSLLLH
Sbjct: 1   MVVITQVNNCDIAIIVVFVIIAIVVIIFSRRHTTLHLQLSLVHRNISDVSFVSALSLLLH 60

Query: 61  LLCQADLRSQFLNLLRSHISFVSFDISSNFDISNLQHLLYSPNLISPSS 110
           LLCQADLRSQFLNLLRSHISFVSFDISSNFDISNLQHLLYSPNLISPSS
Sbjct: 61  LLCQADLRSQFLNLLRSHISFVSFDISSNFDISNLQHLLYSPNLISPSS 109

[Close]
BLAST of Csa3G585950 vs. NCBI nr
Match: gi|700203051|gb|KGN58184.1| (hypothetical protein Csa_3G585950 [Cucumis sativus])

HSP 1 Score: 209.1 bits (531), Expect = 3.8e-51
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1 

Query: 1   MVVITQVNNCDIAIIVVFVIIAIVVIIFSRRHTTLHLQLSLVHRNISDVSFVSALSLLLH 60
           MVVITQVNNCDIAIIVVFVIIAIVVIIFSRRHTTLHLQLSLVHRNISDVSFVSALSLLLH
Sbjct: 1   MVVITQVNNCDIAIIVVFVIIAIVVIIFSRRHTTLHLQLSLVHRNISDVSFVSALSLLLH 60

Query: 61  LLCQADLRSQFLNLLRSHISFVSFDISSNFDISNLQHLLYSPNLISPSS 110
           LLCQADLRSQFLNLLRSHISFVSFDISSNFDISNLQHLLYSPNLISPSS
Sbjct: 61  LLCQADLRSQFLNLLRSHISFVSFDISSNFDISNLQHLLYSPNLISPSS 109

The following BLAST results are available for this feature:
BLAST of Csa3G585950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LB51_CUCSA2.6e-51100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G585950 PE=4 SV=1[more]
BLAST of Csa3G585950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203051|gb|KGN58184.1|3.8e-51100.00hypothetical protein Csa_3G585950 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G585950.1Csa3G585950.1mRNA