Csa3G516490 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGGAAAAGAGAAATAGAAAAGTGGGAAACCTAGCCTTCATAATCTTCTTCTTCCCCTTGCATAGGCCGGCCACCCCCTTTCTGTTCATTCTTCTTGGCCGGCGAGCCTCAGACGGCAAAGACCCCTATGAATTCACGTTGACACGAGCAGACACCCTCACGTTCAAGGTGTTACTCACGAACCCACTTCTCTCCGTCACTTCTGGCGAGCCGTGTTGGTGAAACCCACAAGTCATTTCTGCAATGGTAACGCGATTCTCGATAAAGCTCCATGGGTTTTATGGTCGTTGTGTAGCCAAGCCGATGTGACACCCATGAGACAGGAACCCACTTTGTACACCTTCCAATCAATGTCTCTCCGTCTCGACAGGTTTCAGTATTGACCCACACTTCGATTGACTTCAAATTGGTGTACTCATATTGTTTAAGGTTCAGATCTGCCAAGTTCCACGTTTTTGGATACCCGCCAGCAAGGTTTAGAGCCTCTTCGATAAGATTCGGTAAGAATTATTGCTCTAATTTTTTTTTTTTTTTGAATTGGATTGAAGTGTTTGAACAGTACTCTGAATTATTGGTACTTGTTTGTTGTTATGTTTGGGTAGATTTTGTGAGTAGTTGATTAAGGTTCAGCGTGGTTGATCACGTTTTGGACTAGTTTGAACTTGAATAAAGTGTCTTAGATCAGTCTTTCACTCGTGGAAGGTTGTTGGTTGTAGTATCGTACTAATTTGTAGTGGTTAATTAAGGTTTATGGTGAATTTTGGATTAGAACATTCTTGTCTGAAAACCTCTTGTTGTTGATTAAGGTTTTCGAAGTAGGTTCTAATCCTTAAACATGATGTTTATTGTTTAGGTTTTCTAAAGGATGTTCGTTCAAGGAAGCCAATTTTTTAATTGAGAATTATCGTATTGTTGATCGAGGTAAGTAGTTTTCACATCCTTTTCACAATTTAAATTTTGATAAAGATGTGTTTTGACTGTTGTGATTGGATAAATGGCTGATAGTGTTCTGGATATTTGAAAAGATACTTTGTACCATTTCAAACCCCTTGAATTTGTTTGGATGTTATTAATGTTTTCCTTCTTGAAAACATGTTTTATGTGATTTGAGAATCGACTGAAAGTTTTTTGTATATTTTTAGTTGATTTTGTTTTATTTAAGTATAGTGACTATTTCGAATGATACATGAAGATGTTTTGATTGATTTTGAATTGAATGTGTTTTTTGTTTTTGTTTTGGTTACATCTATGAACTTGTTAAAGATTTAAATAGTTTTATTTGATGAGTTCTGTTGTTGAAATTGCTATTTGAAACTGCATGTTTTGTTTCAAATATTTCTGATTGATTAGACAGGAATATTCGGATATGCTAGTTTTTGTGTTTAGAGATTGTTTGGTATTTTGTTATAGCCAAATTTGGAATTGACAATTTCTGTTCCAACTGAATTTATCTGTGAGAAGACACGTTTTTGTGGTTTGACATTCTTTCGAGTGAAGATTCTTGCGTGATGCACTCACATAGCCTCACATTTAAAGTAATTTCTGTTCTGGTCAATGTTTCTGCAATTTTCGTTCGTTAGTTGACCTTTCTGACCGGTGTTATTGACATACATTTATGCTGGGCTACTTCAACTATGCATCTTTCTTATTTTGTACTTAAAAGTTTTGAACGACTGAAAGCTTTATAATACTATTAACTGATTGAGAGTATTGACTGATTTAAAGCTTTGTATTTGAAAGTTTTGAACAATTTGTGTTTTTAAAAGTATGAAAGTGTTGTTTATTAAAGGTGCTGAAAGTTTATTTGAGCGTTTTGGTTTTGTTGAAAGACTGAAAGTTTAGTTTTGAAGTTTTATGATAGACTACTTGTGATACACGCATATGACAGGAGGGGTAAAAAGGGAAAATAAATAGTTATGAGAGTCTAGTGGGACAAAAAAACGGGTAGTTGGTATATGTAGTGTTTTGAACTTTTGGTGAGGGTTATCTGGTTTTATCCGTTGTGTGTTATTTCCTCTCTAGTGCGGGAGGAAGATTGATTTGTACTCTTCTTTTTGACTTTTTAATTTCAATAAGATTCTCTTCTTGATTCCTATCATTTTAGCTGCTTGAAAGATCTTGATTTTGAAGTATCTATTGTTGCAAAGTCTTGACCAAAAGTTTTGTAATGATTTGTATTTTTATTTCCAAAAGTTTTGAAAGCAGTTGAATTTCAAACCTTGATATGGGAACTGCTTATTGAGATTATTTTTGTACTCATATTTGTTTTTCCAAAATGCTTTCAGATGAAGGATCATGTGAAAGTTTTGAAGAAAGTGAAGTTTGGCATTCAGGCATAGGTCATCAAAGGATGTTTATGTTAGGATTTGATAGTTTGACTCAGGACGTCTTTGTAATAAGTTGCTTCTGCTGATTTGTGTAAGTTGTAAAACTTATAGTTATTAAGTTTTCTGCATTTTTTATAATAGCAGTATTAGAAAATACGGGCTATTACATAAAATTTGGTATCTAATCTATTGACAACCGATGCCAGATTAATTAAATAGTTCTCAGATGCTCATGAAGGAATGATTCTGACAAAGCAATACCGGTGTGTGCATTCAGCAAGCTGCCAGTGCACCAAGGGGCACCTCAGTGAGGATGCAATATTCCTAGTATTCCAGCATTTGAACTGGAATCCGAAGTTGATTGCTACTCTCTCCTGTGCATGCAAATGGTTTGACGATCTTGCCAAGCGAGTGCTATGGAAGGAGTTTTGCAGGACCCGAGCCCCAAAAATGATGCTGGATCTGCAGTCTAGCGGGAGTCACAGTGTGGATGGTAACTGGAGAGCTCTTGGAAAACTGCTTATTTATTGCTCAGGATGTAAGAAGGGTGGTCTGTTCAATAACATTCAAATTCCTGGTCATTTTGTTTATAGAACCCGATTTTCTAGGACATCGGGCAAGAGTTTTCTTATGCCACAATGCAGAACAGATATTTTATATGTATCTGATCCTTGTGAACATCTCGATCAAGGGGAAGAGGGGGATATTGGTTTCTTCAGGGGTATTTTTAAGTCATTTTCAATGTCAAAGGTTAGGAAAATGCTGATAAAGAGAGGAGCAGAGCTTCATCCAACGGAGGTGTGCCCTTATTGTAAAGCCAAGCTATGGAGCATGCTACAAGCTAAAATGATCCCACAAAGTGCTAGCTGTAGATTGGGTGCTTATGAGGATTGTATTGACTACTATGTCTGCCTGAATGGACATATGCTTGGTATTTGCACTCTGTTACCTTTGTCAGATTCTGAGGAGACATCTGAGTTGGAGTGATAACTATGATCTACAACCTTACAGCTCAGAAAAAGGTAACTAAACACATCTAACGTGTGCATGTTTCTCTAGAGAATCTTGAATCGATTTCAAATATGAGCAACCAAACTGCTCTCAAGTTTTTGAGTCAAATACATTTTGTTTAAATATTTGTTATGTTTTTCCTTCTGCAACCACGCTGAAGCAAGTGTCGTAATTATATGGTTATATGGTTAGATTTGTTGAATCCCAACCAACAATAACCTGAGTATGTAGTGGCAAAACTACTTCCAAGTACCTCCTATTGGTTTTCCATTGGAGGAACTTGGAAATTTTATCTGATGTGTGGAATGGTTTCTTTTACAAGCCTTTGGTGTCTTTTACATGCACCAGAAGGAAGAAAGGTACCAGGGGAGTTGAATTATGCTACGAACCAAGGTAGTAATGAAATGCCTTTATCCCACATTTTAACCAATGTGGCATTTAAGTTGCTTGACTCTCCAAGATGATTAAGTACCTAACACTAGTATCAAATCTAGTTGTTGACATTCTAGAGTGGAACCGGCGGAGGGTTCTAATCAGTGTGGCCGAGTGAAGTGTTGCTGGAGTAGCTATAGGATGTTAGTTTTTCGAAAAGGGGGTATTGTTAGGAATCAAGGTAGTATGGGATGCCTTTGTCCCATAATGGTTAGAATGGAAACCATCATGAGTTGACCTAGTGGTAAGAAAAGGAGATATAGTCTTAATAACTAATTAAGACGTTATGGGTTCAATACGTGGTGATTACCTACTTAGGAATTAATTTCTTACTAGTTACCTTGACACCCAAATGTTGTAGGGTTAGATAGGTTGTCCTGTGAGATTGGGCAGGTGCGCGTAAGCTGGTCCGGACACTCATGGATATAAAAAAAATATTAGTTGGAATGGGATGACCAATGTGGTACTTTAAGTGGCTTGGCTCTCCAACCCCAATAGCTAACTTTTGGGGTGTGGTTCTCCAGGGTGCTTAAGTATCTAACAAATTAGTACCTAAGAAGGTGTGATACTGTTTTCGGGTTTTTGGTGTGAGTGAGAATGCACAAGAGATGGCTTGTTGTTAGTGCTGCCCCAGTGAAATTGCAAATAAAAGACAATAAAATGGAGAGCTGGGGGGATGGGGATGTGCCCATGGGGTTTATACAAGTATCTTTGCACTAAATTGGAGTTGAAGTTTTTGCATTTTCCATTCCCTATCTTTTTCTTTTTTAAAAAATTATTTATGGGAACTATTGCATCTGAGAAGTCGTTCTTGAACAGGTTGATAAAAACGCCTGGAAAATCACTATTTGATCTCACGTAGATTGAATGAACTTTGCTTCAAGTGCGTTCAACTTCTGTTTCATGGAATCAAAGAAAGCAATCCCACCTCGTTTTCATCTGCATTCTGCAGCCTTAGCATTCTGGATAAATTTTTTGTGGGTGAAGTCTTAGGACAAGATTTTTGTCAAAAGGGAAAGAAAACAAAAACATCCTTTTTACCTGAAAAGGTTGTGTGTGAACCATGTAATTTTCATGTAAATTAACCCCTGATTCTATACTTGGTATTGTTGGAATGATTATGTACCCGTCTTATAAGGCTATGGATTGCTTCATATTTTCTTTAACTCTTAGAGATCTTCTTTTGAAATGGATACCTCTAAGCTAAAGCTTCTGTACCCTTATTGATTGTCCAGGGAATAGAAAGGCATCAATCTCCCCCTTGTTTGAATTGCATGGCTTGCCAAGCACCATATGTTGTCGGCTTTTAGGGATTGGACCAGTTCAAATAAAATGACTATTGATTACGGAGGTGTGCCCTTATTTGAATTTCCTTCTCCAATATCTTTATCCTTATATATTTCCTTTTTCTTTTCCTATCCCATGTGTCTATATTTTCGTATACAAATTTTCTTGACCTCATATACAAATTTTCATTATCTTCTCC ATGATTCTGACAAAGCAATACCGGTGTGTGCATTCAGCAAGCTGCCAGTGCACCAAGGGGCACCTCAGTGAGGATGCAATATTCCTAGTATTCCAGCATTTGAACTGGAATCCGAAGTTGATTGCTACTCTCTCCTGTGCATGCAAATGGTTTGACGATCTTGCCAAGCGAGTGCTATGGAAGGAGTTTTGCAGGACCCGAGCCCCAAAAATGATGCTGGATCTGCAGTCTAGCGGGAGTCACAGTGTGGATGGTAACTGGAGAGCTCTTGGAAAACTGCTTATTTATTGCTCAGGATGTAAGAAGGGTGGTCTGTTCAATAACATTCAAATTCCTGGTCATTTTGTTTATAGAACCCGATTTTCTAGGACATCGGGCAAGAGTTTTCTTATGCCACAATGCAGAACAGATATTTTATATGTATCTGATCCTTGTGAACATCTCGATCAAGGGGAAGAGGGGGATATTGGTTTCTTCAGGGGTATTTTTAAGTCATTTTCAATGTCAAAGGTTAGGAAAATGCTGATAAAGAGAGGAGCAGAGCTTCATCCAACGGAGGTGTGCCCTTATTGTAAAGCCAAGCTATGGAGCATGCTACAAGCTAAAATGATCCCACAAAGTGCTAGCTGTAGATTGGGTGCTTATGAGGATTGTATTGACTACTATGTCTGCCTGAATGGACATATGCTTGGTATTTGCACTCTGTTACCTTTGTCAGATTCTGAGGAGACATCTGAGTTGGAGTGA ATGATTCTGACAAAGCAATACCGGTGTGTGCATTCAGCAAGCTGCCAGTGCACCAAGGGGCACCTCAGTGAGGATGCAATATTCCTAGTATTCCAGCATTTGAACTGGAATCCGAAGTTGATTGCTACTCTCTCCTGTGCATGCAAATGGTTTGACGATCTTGCCAAGCGAGTGCTATGGAAGGAGTTTTGCAGGACCCGAGCCCCAAAAATGATGCTGGATCTGCAGTCTAGCGGGAGTCACAGTGTGGATGGTAACTGGAGAGCTCTTGGAAAACTGCTTATTTATTGCTCAGGATGTAAGAAGGGTGGTCTGTTCAATAACATTCAAATTCCTGGTCATTTTGTTTATAGAACCCGATTTTCTAGGACATCGGGCAAGAGTTTTCTTATGCCACAATGCAGAACAGATATTTTATATGTATCTGATCCTTGTGAACATCTCGATCAAGGGGAAGAGGGGGATATTGGTTTCTTCAGGGGTATTTTTAAGTCATTTTCAATGTCAAAGGTTAGGAAAATGCTGATAAAGAGAGGAGCAGAGCTTCATCCAACGGAGGTGTGCCCTTATTGTAAAGCCAAGCTATGGAGCATGCTACAAGCTAAAATGATCCCACAAAGTGCTAGCTGTAGATTGGGTGCTTATGAGGATTGTATTGACTACTATGTCTGCCTGAATGGACATATGCTTGGTATTTGCACTCTGTTACCTTTGTCAGATTCTGAGGAGACATCTGAGTTGGAGTGA MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIYCSGCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGFFRGIFKSFSMSKVRKMLIKRGAELHPTEVCPYCKAKLWSMLQAKMIPQSASCRLGAYEDCIDYYVCLNGHMLGICTLLPLSDSEETSELE*
BLAST of Csa3G516490 vs. Swiss-Prot
Match: EDL2_ARATH (EID1-like F-box protein 2 OS=Arabidopsis thaliana GN=EDL2 PE=2 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 1.9e-127 Identity = 209/249 (83.94%), Postives = 227/249 (91.16%), Query Frame = 1
BLAST of Csa3G516490 vs. Swiss-Prot
Match: EDL1_ARATH (EID1-like F-box protein 1 OS=Arabidopsis thaliana GN=EDL1 PE=2 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 1.0e-120 Identity = 196/244 (80.33%), Postives = 215/244 (88.11%), Query Frame = 1
BLAST of Csa3G516490 vs. Swiss-Prot
Match: EDL3_ARATH (EID1-like F-box protein 3 OS=Arabidopsis thaliana GN=EDL3 PE=2 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 2.5e-50 Identity = 94/223 (42.15%), Postives = 138/223 (61.88%), Query Frame = 1
BLAST of Csa3G516490 vs. TrEMBL
Match: A0A0A0L849_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G516490 PE=4 SV=1) HSP 1 Score: 526.6 bits (1355), Expect = 1.7e-146 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 1
BLAST of Csa3G516490 vs. TrEMBL
Match: M5XD98_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010470mg PE=4 SV=1) HSP 1 Score: 498.0 bits (1281), Expect = 6.5e-138 Identity = 229/248 (92.34%), Postives = 241/248 (97.18%), Query Frame = 1
BLAST of Csa3G516490 vs. TrEMBL
Match: B9SJA3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0524300 PE=4 SV=1) HSP 1 Score: 496.9 bits (1278), Expect = 1.4e-137 Identity = 227/248 (91.53%), Postives = 240/248 (96.77%), Query Frame = 1
BLAST of Csa3G516490 vs. TrEMBL
Match: A0A067FZE0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0257711mg PE=4 SV=1) HSP 1 Score: 496.9 bits (1278), Expect = 1.4e-137 Identity = 228/248 (91.94%), Postives = 239/248 (96.37%), Query Frame = 1
BLAST of Csa3G516490 vs. TrEMBL
Match: V4SZF0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012574mg PE=4 SV=1) HSP 1 Score: 496.9 bits (1278), Expect = 1.4e-137 Identity = 228/248 (91.94%), Postives = 239/248 (96.37%), Query Frame = 1
BLAST of Csa3G516490 vs. TAIR10
Match: AT5G39360.1 (AT5G39360.1 EID1-like 2) HSP 1 Score: 456.4 bits (1173), Expect = 1.1e-128 Identity = 209/249 (83.94%), Postives = 227/249 (91.16%), Query Frame = 1
BLAST of Csa3G516490 vs. TAIR10
Match: AT5G15440.1 (AT5G15440.1 EID1-like 1) HSP 1 Score: 434.1 bits (1115), Expect = 5.8e-122 Identity = 196/244 (80.33%), Postives = 215/244 (88.11%), Query Frame = 1
BLAST of Csa3G516490 vs. TAIR10
Match: AT3G63060.1 (AT3G63060.1 EID1-like 3) HSP 1 Score: 200.3 bits (508), Expect = 1.4e-51 Identity = 94/223 (42.15%), Postives = 138/223 (61.88%), Query Frame = 1
BLAST of Csa3G516490 vs. NCBI nr
Match: gi|449464252|ref|XP_004149843.1| (PREDICTED: EID1-like F-box protein 2 [Cucumis sativus]) HSP 1 Score: 526.6 bits (1355), Expect = 2.4e-146 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 1
BLAST of Csa3G516490 vs. NCBI nr
Match: gi|470136965|ref|XP_004304251.1| (PREDICTED: EID1-like F-box protein 2 [Fragaria vesca subsp. vesca]) HSP 1 Score: 504.2 bits (1297), Expect = 1.3e-139 Identity = 232/248 (93.55%), Postives = 244/248 (98.39%), Query Frame = 1
BLAST of Csa3G516490 vs. NCBI nr
Match: gi|645249654|ref|XP_008230841.1| (PREDICTED: EID1-like F-box protein 2 [Prunus mume]) HSP 1 Score: 499.2 bits (1284), Expect = 4.2e-138 Identity = 230/248 (92.74%), Postives = 241/248 (97.18%), Query Frame = 1
BLAST of Csa3G516490 vs. NCBI nr
Match: gi|225452944|ref|XP_002284224.1| (PREDICTED: EID1-like F-box protein 2 [Vitis vinifera]) HSP 1 Score: 498.8 bits (1283), Expect = 5.4e-138 Identity = 229/246 (93.09%), Postives = 239/246 (97.15%), Query Frame = 1
BLAST of Csa3G516490 vs. NCBI nr
Match: gi|595941236|ref|XP_007215861.1| (hypothetical protein PRUPE_ppa010470mg [Prunus persica]) HSP 1 Score: 498.0 bits (1281), Expect = 9.3e-138 Identity = 229/248 (92.34%), Postives = 241/248 (97.18%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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