Csa3G481250 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGTTTCATATAACAGAAATACCAGACAAAAACAGTTCCCATAGAGAGAGAGCGATTAGAGGAAAACAGAACAAAAAGAGAGATTGACCAAAACATTTGATCACAACAATGGAAATGGCCACCAAGATCGAAAACAGAACGGATCGAAGAAGACGAATTATGAGCAGAGAAATTGATCGAATGGCTCTCATCACCGGCCGTTTACGTAATCTCCCTCCTTCCCCACCCCCTTCTCCATCTTCCCCTTCCCCTTTTCTTTACCATCAAACTCACCAACGCGGCCATTCTCACACCGGTATCTCCCCTTCCTTTTTCTCCAAGGACATCCACGCCAATCCTGATTCCCCTCCTCTTCCCAACGCCCAAGGTATGTTCATTCATTCATTCTTCTTCTTCTTTATTCTCATCACATTCATTCCTTTCTTAGGTTTTCTTTTCCCCCCTTCCTTCTATTTTTTTATCATTATTATTTACAACCTAGGTTTAATTTCATTGATTCCTTTTTCGTTTTTTTATGCATTAAAGATTCATCCTTTCTGTCTACATTTTATTGTTTATGTGGATTCAAGTCGTGTTGTATATTTGATGATTATCGAGGAATCATCAGATTTCATTACATGAGCTTCATCAAATAAATGCTAACTATGATTATTATAATAATCCTCCATCATACAATTAAGATATGTCCCGTATAAATTGCTATATTGAATCAGTTTACTTTTCTTGACATAAGAAGAGGTTTCGTATGATCTCGATGTAGTTGGAAAGAAGTTTTTTTTTTTTTTTTTGCAAAGGTATTGTAATAAATGCTGAGCTGGGATTTGAACGTGAGACCTTTTATCCACATGAACATACAGGTGCCAGTTAAGCTAAGCTCATGTTGGCAAGAGGTTATTTTATTGCAAGTGTGTGTTAATATTCATAAGGTTTCGGTTTGCTATTGATTGTATGTATGTATATCCAAGCATCTTTAAAGTTGAGAAGAACAATGACAAGAGACATCTTTTGATAATATTTGTGGAATTTAAAAAAAAAAACAATGTATTAGAAACATTAGTTTCTTCACTTCGATCAAATCAATAACTATGTAATGGCTCTATCTTTGGCTATCGGTTCTTGTTTGAATCTTTTCTAACAATGTGTTGGATTATGATTTATCGTTCGTTTTCTCTATCAATGAAATCGGTAAGATGGTTTACGTTGGTTAATTTTTGTGATGAGAAAATCTGTTTTGATATCGTAAGTGATAACATACTAACGGGGATTATGCATCGATGGCTAATGATATGTGTTAGAATTATGTTGGATTGATTATGAAATGAGTTGAATGTTGGTATTAAATGGGAATGTGAGAACAATTTATCACTTAAACTACCTTTTTTTTTTTTCGAAGGAGAAGCGCTGTTTGGACAATAGATTATATTGAAACCATACAATCTGTTTGAATTTTAGTTTCATTTATTTGCAGGTGTTCCCAAGCCTAAAGATGCAAAAGCTACTCCTTTACTGAAGCGTTTGTCAATGAGTGAAGCTCGAGAAGAAAAAATTGCTGCCATAGGATTCCAAATCAACCATAAAAAACTCGACCCCATAGGAGAAATACACACTGAAACAGTATCAACTCCATCTGCCTCGTCAATGGTTCAAAAAGTTACCTCCACTGATAACGAGATACTCTTAAAAGCACACCCTTCAAAGCCCAAACTCTTCACTTCAAAACGACTAAATGCCTCCATTTTAGCTTCTCAAACCACACGAGTTTTCTGTTCCCTAATCATCGCATCTTTGGCCGTTCTATCGCACGTCAATCACCCGCTTTCCATGATTTGGAAGATGGTGAGGTCGGAAAGGGTGGTGGCCTCGAAACCTCTCTACATTCTACTGCTTACCGATGCAACCATCGTTGTGGCTAGAATGTTGGCTGCAAGACAGAAAGACAGTAGAGAGGCAGAGGAAGAAAGCGAGAAAATGAAGGAAGATGGACATAATTGGGACTCAGCTGTGAAAGTGTTGGAGAGAGGTTTGGTTTTTTATCAAGCTTTTCGTGCGATTTTCATCGATTTTAGTGTTTATGCAGTGGTGGTTATTTGTGGCATCTCTTTGCTGTAGCTTTTAATTTATCATCTTTTGGTTTTGATATAGTACGTGTGATTGAACCATCTTCAGTTCTTTGGAGCTTGGATGATGAAGCCCATTTTGAATGATCTATTTAATTTGTTTCGATTATGCTTAACTATATATACATATTTCAAAAGGCACCATTTTGGTGTGCCTGCCTATGCCTATGCCC ATGGAAATGGCCACCAAGATCGAAAACAGAACGGATCGAAGAAGACGAATTATGAGCAGAGAAATTGATCGAATGGCTCTCATCACCGGCCGTTTACGTAATCTCCCTCCTTCCCCACCCCCTTCTCCATCTTCCCCTTCCCCTTTTCTTTACCATCAAACTCACCAACGCGGCCATTCTCACACCGGTATCTCCCCTTCCTTTTTCTCCAAGGACATCCACGCCAATCCTGATTCCCCTCCTCTTCCCAACGCCCAAGGTGTTCCCAAGCCTAAAGATGCAAAAGCTACTCCTTTACTGAAGCGTTTGTCAATGAGTGAAGCTCGAGAAGAAAAAATTGCTGCCATAGGATTCCAAATCAACCATAAAAAACTCGACCCCATAGGAGAAATACACACTGAAACAGTATCAACTCCATCTGCCTCGTCAATGGTTCAAAAAGTTACCTCCACTGATAACGAGATACTCTTAAAAGCACACCCTTCAAAGCCCAAACTCTTCACTTCAAAACGACTAAATGCCTCCATTTTAGCTTCTCAAACCACACGAGTTTTCTGTTCCCTAATCATCGCATCTTTGGCCGTTCTATCGCACGTCAATCACCCGCTTTCCATGATTTGGAAGATGGTGAGGTCGGAAAGGGTGGTGGCCTCGAAACCTCTCTACATTCTACTGCTTACCGATGCAACCATCGTTGTGGCTAGAATGTTGGCTGCAAGACAGAAAGACAGTAGAGAGGCAGAGGAAGAAAGCGAGAAAATGAAGGAAGATGGACATAATTGGGACTCAGCTGTGAAAGTGTTGGAGAGAGGTTTGGTTTTTTATCAAGCTTTTCGTGCGATTTTCATCGATTTTAGTGTTTATGCAGTGGTGGTTATTTGTGGCATCTCTTTGCTGTAG ATGGAAATGGCCACCAAGATCGAAAACAGAACGGATCGAAGAAGACGAATTATGAGCAGAGAAATTGATCGAATGGCTCTCATCACCGGCCGTTTACGTAATCTCCCTCCTTCCCCACCCCCTTCTCCATCTTCCCCTTCCCCTTTTCTTTACCATCAAACTCACCAACGCGGCCATTCTCACACCGGTATCTCCCCTTCCTTTTTCTCCAAGGACATCCACGCCAATCCTGATTCCCCTCCTCTTCCCAACGCCCAAGGTGTTCCCAAGCCTAAAGATGCAAAAGCTACTCCTTTACTGAAGCGTTTGTCAATGAGTGAAGCTCGAGAAGAAAAAATTGCTGCCATAGGATTCCAAATCAACCATAAAAAACTCGACCCCATAGGAGAAATACACACTGAAACAGTATCAACTCCATCTGCCTCGTCAATGGTTCAAAAAGTTACCTCCACTGATAACGAGATACTCTTAAAAGCACACCCTTCAAAGCCCAAACTCTTCACTTCAAAACGACTAAATGCCTCCATTTTAGCTTCTCAAACCACACGAGTTTTCTGTTCCCTAATCATCGCATCTTTGGCCGTTCTATCGCACGTCAATCACCCGCTTTCCATGATTTGGAAGATGGTGAGGTCGGAAAGGGTGGTGGCCTCGAAACCTCTCTACATTCTACTGCTTACCGATGCAACCATCGTTGTGGCTAGAATGTTGGCTGCAAGACAGAAAGACAGTAGAGAGGCAGAGGAAGAAAGCGAGAAAATGAAGGAAGATGGACATAATTGGGACTCAGCTGTGAAAGTGTTGGAGAGAGGTTTGGTTTTTTATCAAGCTTTTCGTGCGATTTTCATCGATTTTAGTGTTTATGCAGTGGTGGTTATTTGTGGCATCTCTTTGCTGTAG MEMATKIENRTDRRRRIMSREIDRMALITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHSHTGISPSFFSKDIHANPDSPPLPNAQGVPKPKDAKATPLLKRLSMSEAREEKIAAIGFQINHKKLDPIGEIHTETVSTPSASSMVQKVTSTDNEILLKAHPSKPKLFTSKRLNASILASQTTRVFCSLIIASLAVLSHVNHPLSMIWKMVRSERVVASKPLYILLLTDATIVVARMLAARQKDSREAEEESEKMKEDGHNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICGISLL*
BLAST of Csa3G481250 vs. TrEMBL
Match: A0A0A0L815_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G481250 PE=4 SV=1) HSP 1 Score: 587.8 bits (1514), Expect = 7.5e-165 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 1
BLAST of Csa3G481250 vs. TrEMBL
Match: B9RQR3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1495360 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 2.7e-42 Identity = 125/295 (42.37%), Postives = 168/295 (56.95%), Query Frame = 1
BLAST of Csa3G481250 vs. TrEMBL
Match: U5GLN1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s05400g PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 2.3e-41 Identity = 120/290 (41.38%), Postives = 159/290 (54.83%), Query Frame = 1
BLAST of Csa3G481250 vs. TrEMBL
Match: A0A067EBJ1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021998mg PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40 Identity = 123/315 (39.05%), Postives = 180/315 (57.14%), Query Frame = 1
BLAST of Csa3G481250 vs. TrEMBL
Match: A0A0B2STI2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_029227 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 3.8e-36 Identity = 117/315 (37.14%), Postives = 156/315 (49.52%), Query Frame = 1
BLAST of Csa3G481250 vs. TAIR10
Match: AT4G32680.1 (AT4G32680.1 unknown protein) HSP 1 Score: 93.6 bits (231), Expect = 2.2e-19 Identity = 88/304 (28.95%), Postives = 140/304 (46.05%), Query Frame = 1
BLAST of Csa3G481250 vs. TAIR10
Match: AT1G52343.1 (AT1G52343.1 unknown protein) HSP 1 Score: 88.2 bits (217), Expect = 9.4e-18 Identity = 60/161 (37.27%), Postives = 87/161 (54.04%), Query Frame = 1
HSP 2 Score: 52.4 bits (124), Expect = 5.7e-07 Identity = 33/76 (43.42%), Postives = 42/76 (55.26%), Query Frame = 1
BLAST of Csa3G481250 vs. NCBI nr
Match: gi|449465278|ref|XP_004150355.1| (PREDICTED: uncharacterized protein LOC101203675 [Cucumis sativus]) HSP 1 Score: 587.8 bits (1514), Expect = 1.1e-164 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 1
BLAST of Csa3G481250 vs. NCBI nr
Match: gi|659093364|ref|XP_008447503.1| (PREDICTED: uncharacterized protein LOC103489936 [Cucumis melo]) HSP 1 Score: 525.8 bits (1353), Expect = 5.0e-146 Identity = 266/301 (88.37%), Postives = 281/301 (93.36%), Query Frame = 1
BLAST of Csa3G481250 vs. NCBI nr
Match: gi|645244637|ref|XP_008228514.1| (PREDICTED: uncharacterized protein LOC103327918 [Prunus mume]) HSP 1 Score: 207.6 bits (527), Expect = 3.0e-50 Identity = 131/293 (44.71%), Postives = 179/293 (61.09%), Query Frame = 1
BLAST of Csa3G481250 vs. NCBI nr
Match: gi|658014768|ref|XP_008342709.1| (PREDICTED: uncharacterized protein LOC103405481 [Malus domestica]) HSP 1 Score: 194.1 bits (492), Expect = 3.4e-46 Identity = 133/297 (44.78%), Postives = 174/297 (58.59%), Query Frame = 1
BLAST of Csa3G481250 vs. NCBI nr
Match: gi|255550062|ref|XP_002516082.1| (PREDICTED: uncharacterized protein LOC8274534 [Ricinus communis]) HSP 1 Score: 180.6 bits (457), Expect = 3.9e-42 Identity = 125/295 (42.37%), Postives = 168/295 (56.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |