Csa3G389870 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G389870
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Kelch repeat-containing F-box family protein; contains IPR015915 (Kelch-type beta propeller)
Location	Chr3 : 19061256 .. 19062074 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTGTAACCCCCATGTTTACGGTCTCTGCAATTTCACTCCTATTTCCCTTGGCCCTCACTTGTATGTCATCGGCGGCTCACTCTTTGACACTCGCTCTTTCCCAATCGGTCGTCCTTCCTCTTCCTCCTCTGCTTTCCGATTCGATTTCCATTCATCCTTTTGGGAACCCATCTCGTCGATGCTCTCTCCGCGGGGGAGCTTTGCATGTGCTGCCATTCATGATTCCAGTCAGATTTTGGTGGCTGGAGGTGGGTCTAGGCATAGGTTGTTTGCAGCGGCTGGGAGTCGAATGAGCTCCGTCGAAAGGTAGGCTTAACTCAAAAGTTTGAGCTGATGAGTTACTGTAAATTTGATAGGATATTGATACTATTTTTGCAGGTATGATGTGGAGAGAGATGAGTGGGTTGCACTTGATGGGTTGCCGACCTTGAGAGCTGGGTGTGTTGGATTTTTTGTGGGGAATGGAGAGAAGAGAGAGTTCTGGGTGATGGGTGGTTATGGTGAATCGAGGACTATTTCAGGAATGTTTCCTGTAGATGAATATTACAGAGATGCGGTGGTGATGGAGCTGAGAAATGGGAGGTGGAGGCAAATTGGGGATATGTGGGAAGAAGGGGAAAGGAGGAGACTAGGTAAAATTGTAGTGATTGAGAATCATCGTAACCGTGGAAAACCTGGAATTTTCATGCTTGATGGTGATGAATTCTTAAGGTTACTCTTGTTCTCTTTACTGGGTTATGTGTTTAAGATTTTCATAATAGTTGAGAAAGGTTTTAGTTTTTTTCATGGTTTACTAGAGCTAATAACTTTCTGA

mRNA sequence

ATGCCTTGTAACCCCCATGTTTACGGTCTCTGCAATTTCACTCCTATTTCCCTTGGCCCTCACTTGTATGTCATCGGCGGCTCACTCTTTGACACTCGCTCTTTCCCAATCGGTCGTCCTTCCTCTTCCTCCTCTGCTTTCCGATTCGATTTCCATTCATCCTTTTGGGAACCCATCTCGTCGATGCTCTCTCCGCGGGGGAGCTTTGCATGTGCTGCCATTCATGATTCCAGTCAGATTTTGGTGGCTGGAGGTGGGTCTAGGCATAGGTTGTTTGCAGCGGCTGGGAGTCGAATGAGCTCCGTCGAAAGGTATGATGTGGAGAGAGATGAGTGGGTTGCACTTGATGGGTTGCCGACCTTGAGAGCTGGGTGTGTTGGATTTTTTGTGGGGAATGGAGAGAAGAGAGAGTTCTGGGTGATGGGTGGTTATGGTGAATCGAGGACTATTTCAGGAATGTTTCCTGTAGATGAATATTACAGAGATGCGGTGGTGATGGAGCTGAGAAATGGGAGGTGGAGGCAAATTGGGGATATGTGGGAAGAAGGGGAAAGGAGGAGACTAGGTAAAATTGTAGTGATTGAGAATCATCGTAACCGTGGAAAACCTGGAATTTTCATGCTTGATGGTGATGAATTCTTAAGGTTACTCTTGTTCTCTTTACTGGGTTATGTGTTTAAGATTTTCATAATAGTTGAGAAAGGTTTTAGTTTTTTTCATGGTTTACTAGAGCTAATAACTTTCTGA

Coding sequence (CDS)

ATGCCTTGTAACCCCCATGTTTACGGTCTCTGCAATTTCACTCCTATTTCCCTTGGCCCTCACTTGTATGTCATCGGCGGCTCACTCTTTGACACTCGCTCTTTCCCAATCGGTCGTCCTTCCTCTTCCTCCTCTGCTTTCCGATTCGATTTCCATTCATCCTTTTGGGAACCCATCTCGTCGATGCTCTCTCCGCGGGGGAGCTTTGCATGTGCTGCCATTCATGATTCCAGTCAGATTTTGGTGGCTGGAGGTGGGTCTAGGCATAGGTTGTTTGCAGCGGCTGGGAGTCGAATGAGCTCCGTCGAAAGGTATGATGTGGAGAGAGATGAGTGGGTTGCACTTGATGGGTTGCCGACCTTGAGAGCTGGGTGTGTTGGATTTTTTGTGGGGAATGGAGAGAAGAGAGAGTTCTGGGTGATGGGTGGTTATGGTGAATCGAGGACTATTTCAGGAATGTTTCCTGTAGATGAATATTACAGAGATGCGGTGGTGATGGAGCTGAGAAATGGGAGGTGGAGGCAAATTGGGGATATGTGGGAAGAAGGGGAAAGGAGGAGACTAGGTAAAATTGTAGTGATTGAGAATCATCGTAACCGTGGAAAACCTGGAATTTTCATGCTTGATGGTGATGAATTCTTAAGGTTACTCTTGTTCTCTTTACTGGGTTATGTGTTTAAGATTTTCATAATAGTTGAGAAAGGTTTTAGTTTTTTTCATGGTTTACTAGAGCTAATAACTTTCTGA

Protein sequence

MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPISSMLSPRGSFACAAIHDSSQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLPTLRAGCVGFFVGNGEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMELRNGRWRQIGDMWEEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLRLLLFSLLGYVFKIFIIVEKGFSFFHGLLELITF*

Homology

[Close]

BLAST of Csa3G389870 vs. Swiss-Prot
Match: FK125_ARATH (F-box/kelch-repeat protein OR23 OS=Arabidopsis thaliana GN=OR23 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.9e-74
Identity = 141/226 (62.39%), Postives = 165/226 (73.01%), Query Frame = 1


Query: 1   MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS 60
           MPCNPHVYGLCNF  ++LGP++YV+GGS FDTRS+P+  P  +SS FR+ F  S WE +S
Sbjct: 125 MPCNPHVYGLCNFVAVALGPYVYVLGGSAFDTRSYPLDVPLPTSSVFRYSFVKSVWERLS 184

Query: 61  SMLSPRGSFACAAIHDS-SQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLP 120
            M+SPRGSFACAA+  S  +I+VAGGGSRH LF AAGSRMSSVE YDVE+DEW  ++ LP
Sbjct: 185 PMMSPRGSFACAAMPGSCGRIIVAGGGSRHTLFGAAGSRMSSVEMYDVEKDEWRVMNELP 244

Query: 121 TLRAGCVGFFVGN-------GEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMELR--- 180
             RAGCVGF V N        E REFWVMGGYG SRT+SG+ PVDEYY+DAVVM+LR   
Sbjct: 245 RFRAGCVGFLVENEKEKEKEEEGREFWVMGGYGGSRTVSGILPVDEYYKDAVVMDLRVDG 304

Query: 181 NGRWRQIGDMWEEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLR 216
             +WR +GDMW E ER +LGKIV ++     GKP  FMLD D  LR
Sbjct: 305 GEKWRVVGDMWGEEERPKLGKIVAVD----CGKPVFFMLDKDWILR 346

[Close]

BLAST of Csa3G389870 vs. TrEMBL
Match: A0A0A0LB80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G389870 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 8.7e-143
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 1


Query: 1   MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS 60
           MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS
Sbjct: 1   MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS 60

Query: 61  SMLSPRGSFACAAIHDSSQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLPT 120
           SMLSPRGSFACAAIHDSSQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLPT
Sbjct: 61  SMLSPRGSFACAAIHDSSQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLPT 120

Query: 121 LRAGCVGFFVGNGEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMELRNGRWRQIGDMW 180
           LRAGCVGFFVGNGEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMELRNGRWRQIGDMW
Sbjct: 121 LRAGCVGFFVGNGEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMELRNGRWRQIGDMW 180

Query: 181 EEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLRLLLFSLLGYVFKIFIIVEKGFSFFH 240
           EEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLRLLLFSLLGYVFKIFIIVEKGFSFFH
Sbjct: 181 EEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLRLLLFSLLGYVFKIFIIVEKGFSFFH 240

Query: 241 GLLELITF 249
           GLLELITF
Sbjct: 241 GLLELITF 248

[Close]

BLAST of Csa3G389870 vs. TrEMBL
Match: M5W2T5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006564mg PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.8e-95
Identity = 164/219 (74.89%), Postives = 193/219 (88.13%), Query Frame = 1


Query: 1   MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS 60
           MPCNPHVYGLCNFT +S+GPHLYVIGGSLFDTRSFPI RPS SS+ FRFDF++S W+ ++
Sbjct: 91  MPCNPHVYGLCNFTSLSIGPHLYVIGGSLFDTRSFPIDRPSPSSAVFRFDFNTSSWDFLA 150

Query: 61  SMLSPRGSFACAAIHDSSQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLPT 120
            ML+PRGSFACAA+  S +ILVAGGGSRH LF+AAGSRM+SVERYD+ R+EWVA+DGLP 
Sbjct: 151 PMLTPRGSFACAAVPSSGEILVAGGGSRHTLFSAAGSRMTSVERYDIGRNEWVAMDGLPG 210

Query: 121 LRAGCVGFFVGNGEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMELRN----GRWRQI 180
            RAGC GFFVG GE+REFWVMGGYGESRTISG+FP+DEYYRDAVVMEL+N    GRWR++
Sbjct: 211 FRAGCAGFFVGEGEEREFWVMGGYGESRTISGVFPIDEYYRDAVVMELKNGNSGGRWREL 270

Query: 181 GDMWEEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLR 216
           GDMWEEGER RLGK+VVIE+  +RG+P +FMLDG++  R
Sbjct: 271 GDMWEEGERVRLGKVVVIEDGDDRGRPAVFMLDGNDIFR 309

[Close]

BLAST of Csa3G389870 vs. TrEMBL
Match: W9S979_9ROSA (F-box/kelch-repeat protein OS=Morus notabilis GN=L484_009770 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.0e-90
Identity = 156/215 (72.56%), Postives = 189/215 (87.91%), Query Frame = 1


Query: 1   MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS 60
           MPCNPH YGLCNF  ++LGP LYV+GGS+FDTRSFP+ RPS SS+AFRFDFH+  W+ ++
Sbjct: 111 MPCNPHRYGLCNFASVALGPTLYVLGGSVFDTRSFPLDRPSPSSAAFRFDFHTWSWDRLA 170

Query: 61  SMLSPRGSFACAAIHDSSQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLPT 120
            ML+PRGSFACAA  +S+QILVAGGGSRH LFAAAGSR+SS ERYD+E+DEWV++DGLP+
Sbjct: 171 PMLAPRGSFACAAEPNSAQILVAGGGSRHALFAAAGSRISSAERYDIEKDEWVSVDGLPS 230

Query: 121 LRAGCVGFFVGNGEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMELRNGRWRQIGDMW 180
            RAGCVGFFV +GE+ EFWVMGGYGESRTI G+FPVDEYYRDAV MEL+N +WR+IGDMW
Sbjct: 231 FRAGCVGFFVRDGEESEFWVMGGYGESRTILGVFPVDEYYRDAVAMELKNRKWREIGDMW 290

Query: 181 EEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLR 216
             GER RLGKIVV+E+  +RG+PG++MLDG++ LR
Sbjct: 291 NSGERVRLGKIVVVED-EDRGRPGVYMLDGNDILR 324

[Close]

BLAST of Csa3G389870 vs. TrEMBL
Match: F6HZH3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g02960 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 8.5e-90
Identity = 160/221 (72.40%), Postives = 187/221 (84.62%), Query Frame = 1


Query: 1   MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS 60
           +P NP+VYGLCNFT ISLGP+LYV+GGSLFDTRSFP+ RPS SSS FRF+F +  WE +S
Sbjct: 119 LPINPYVYGLCNFTSISLGPNLYVLGGSLFDTRSFPLDRPSPSSSVFRFNFLTYSWELLS 178

Query: 61  SMLSPRGSFACAAIHDSSQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLPT 120
            MLSPRGSFAC A+ +S QI+VAGGGSRH +F AAGSRMSSVERYDVE+DEWV+LDGLP 
Sbjct: 179 PMLSPRGSFACVALPNSDQIIVAGGGSRHTMFGAAGSRMSSVERYDVEKDEWVSLDGLPR 238

Query: 121 LRAGCVGFFVGNGEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMEL-RNGRWRQIGDM 180
            RAGCVGF +GNGE++EFWVMGGYGESRT+SG+FPVDEYYRDAVVMEL + G+WR++GDM
Sbjct: 239 FRAGCVGFLIGNGEEKEFWVMGGYGESRTVSGVFPVDEYYRDAVVMELKKGGKWRELGDM 298

Query: 181 WEEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLRLLLFS 221
           WE GER RLGKIVV+++    G P IFMLDG E  R  + S
Sbjct: 299 WEAGERMRLGKIVVVDDEVG-GAPAIFMLDGSEIFRYCMTS 338

[Close]

BLAST of Csa3G389870 vs. TrEMBL
Match: A5CBV5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027398 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 3.2e-89
Identity = 158/217 (72.81%), Postives = 186/217 (85.71%), Query Frame = 1


Query: 1   MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS 60
           +P NP+VYGLCNFT ISLGP+LYV+GGSLFDTRSFP+ RPS SSS FRF+F +  WE +S
Sbjct: 123 LPINPYVYGLCNFTSISLGPNLYVLGGSLFDTRSFPLDRPSPSSSVFRFNFLTYSWELLS 182

Query: 61  SMLSPRGSFACAAIHDSSQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLPT 120
            MLSPRGSFAC A+ +S QI+VAGGGSRH +F AAGSRMSSVERYDVE+DEWV+LDGLP 
Sbjct: 183 PMLSPRGSFACVALPNSDQIIVAGGGSRHTMFGAAGSRMSSVERYDVEKDEWVSLDGLPR 242

Query: 121 LRAGCVGFFVGNGEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMEL-RNGRWRQIGDM 180
            RAGCVGF +GNGE++EFWVMGGYGESRT+SG+FPVDEYYRDAVVMEL + G+WR++GDM
Sbjct: 243 FRAGCVGFLIGNGEEKEFWVMGGYGESRTVSGVFPVDEYYRDAVVMELKKGGKWRELGDM 302

Query: 181 WEEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLRL 217
           WE GER RLGKIVV+++    G P IFMLDG E  ++
Sbjct: 303 WEAGERMRLGKIVVVDDEVG-GAPAIFMLDGSEIFQV 338

[Close]

BLAST of Csa3G389870 vs. TAIR10
Match: AT4G03030.1 (AT4G03030.1 Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 280.4 bits (716), Expect = 1.1e-75
Identity = 141/226 (62.39%), Postives = 165/226 (73.01%), Query Frame = 1


Query: 1   MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS 60
           MPCNPHVYGLCNF  ++LGP++YV+GGS FDTRS+P+  P  +SS FR+ F  S WE +S
Sbjct: 125 MPCNPHVYGLCNFVAVALGPYVYVLGGSAFDTRSYPLDVPLPTSSVFRYSFVKSVWERLS 184

Query: 61  SMLSPRGSFACAAIHDS-SQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLP 120
            M+SPRGSFACAA+  S  +I+VAGGGSRH LF AAGSRMSSVE YDVE+DEW  ++ LP
Sbjct: 185 PMMSPRGSFACAAMPGSCGRIIVAGGGSRHTLFGAAGSRMSSVEMYDVEKDEWRVMNELP 244

Query: 121 TLRAGCVGFFVGN-------GEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMELR--- 180
             RAGCVGF V N        E REFWVMGGYG SRT+SG+ PVDEYY+DAVVM+LR   
Sbjct: 245 RFRAGCVGFLVENEKEKEKEEEGREFWVMGGYGGSRTVSGILPVDEYYKDAVVMDLRVDG 304

Query: 181 NGRWRQIGDMWEEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLR 216
             +WR +GDMW E ER +LGKIV ++     GKP  FMLD D  LR
Sbjct: 305 GEKWRVVGDMWGEEERPKLGKIVAVD----CGKPVFFMLDKDWILR 346

[Close]

BLAST of Csa3G389870 vs. NCBI nr
Match: gi|700202784|gb|KGN57917.1| (hypothetical protein Csa_3G389870 [Cucumis sativus])

HSP 1 Score: 514.2 bits (1323), Expect = 1.2e-142
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 1


Query: 1   MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS 60
           MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS
Sbjct: 1   MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS 60

Query: 61  SMLSPRGSFACAAIHDSSQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLPT 120
           SMLSPRGSFACAAIHDSSQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLPT
Sbjct: 61  SMLSPRGSFACAAIHDSSQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLPT 120

Query: 121 LRAGCVGFFVGNGEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMELRNGRWRQIGDMW 180
           LRAGCVGFFVGNGEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMELRNGRWRQIGDMW
Sbjct: 121 LRAGCVGFFVGNGEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMELRNGRWRQIGDMW 180

Query: 181 EEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLRLLLFSLLGYVFKIFIIVEKGFSFFH 240
           EEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLRLLLFSLLGYVFKIFIIVEKGFSFFH
Sbjct: 181 EEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLRLLLFSLLGYVFKIFIIVEKGFSFFH 240

Query: 241 GLLELITF 249
           GLLELITF
Sbjct: 241 GLLELITF 248

[Close]

BLAST of Csa3G389870 vs. NCBI nr
Match: gi|449468544|ref|XP_004151981.1| (PREDICTED: F-box/kelch-repeat protein OR23 [Cucumis sativus])

HSP 1 Score: 451.1 bits (1159), Expect = 1.3e-123
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 1   MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS 60
           MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS
Sbjct: 103 MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS 162

Query: 61  SMLSPRGSFACAAIHDSSQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLPT 120
           SMLSPRGSFACAAIHDSSQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLPT
Sbjct: 163 SMLSPRGSFACAAIHDSSQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLPT 222

Query: 121 LRAGCVGFFVGNGEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMELRNGRWRQIGDMW 180
           LRAGCVGFFVGNGEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMELRNGRWRQIGDMW
Sbjct: 223 LRAGCVGFFVGNGEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMELRNGRWRQIGDMW 282

Query: 181 EEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLR 216
           EEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLR
Sbjct: 283 EEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLR 317

[Close]

BLAST of Csa3G389870 vs. NCBI nr
Match: gi|659123887|ref|XP_008461887.1| (PREDICTED: F-box/kelch-repeat protein OR23 [Cucumis melo])

HSP 1 Score: 426.8 bits (1096), Expect = 2.6e-116
Identity = 200/215 (93.02%), Postives = 208/215 (96.74%), Query Frame = 1


Query: 1   MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS 60
           MPCNPHVYGLCNFTPISLGP+LYVIGGSLFDTRSFPI RPSSSSSAFRFDFHSSFWEPIS
Sbjct: 103 MPCNPHVYGLCNFTPISLGPYLYVIGGSLFDTRSFPIDRPSSSSSAFRFDFHSSFWEPIS 162

Query: 61  SMLSPRGSFACAAIHDSSQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLPT 120
            MLSPRGSFACA++HDS QILVAGGGSRHRLFAAAGSRMSSVERYDVERDEW+ALDG+P+
Sbjct: 163 PMLSPRGSFACASVHDSGQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWIALDGMPS 222

Query: 121 LRAGCVGFFVGNGEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMELRNGRWRQIGDMW 180
           LRAGCVGFFVGNGEKREFWVMGGYGESRTISG+FPVDEYYRDAVVMEL NGRWRQIGDMW
Sbjct: 223 LRAGCVGFFVGNGEKREFWVMGGYGESRTISGVFPVDEYYRDAVVMELMNGRWRQIGDMW 282

Query: 181 EEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLR 216
           EEGERRRLGKIVVIENH N G+PGIFMLDGDEF R
Sbjct: 283 EEGERRRLGKIVVIENHHNYGQPGIFMLDGDEFFR 317

[Close]

BLAST of Csa3G389870 vs. NCBI nr
Match: gi|645260204|ref|XP_008235722.1| (PREDICTED: F-box/kelch-repeat protein OR23 [Prunus mume])

HSP 1 Score: 357.1 bits (915), Expect = 2.6e-95
Identity = 164/219 (74.89%), Postives = 193/219 (88.13%), Query Frame = 1


Query: 1   MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS 60
           MPCNPHVYGLCNFT +S+GPHLYVIGGSLFDTRSFPI RPS SS+ FRFDF++S W+ ++
Sbjct: 114 MPCNPHVYGLCNFTSLSIGPHLYVIGGSLFDTRSFPIDRPSPSSAVFRFDFNTSSWDFLA 173

Query: 61  SMLSPRGSFACAAIHDSSQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLPT 120
            ML+PRGSFACAA+  S +ILVAGGGSRH LF+AAGSRM+SVERYD+ R+EWVA+DGLP 
Sbjct: 174 PMLTPRGSFACAAVPSSGEILVAGGGSRHTLFSAAGSRMTSVERYDIGRNEWVAMDGLPG 233

Query: 121 LRAGCVGFFVGNGEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMELRN----GRWRQI 180
            RAGC GFFVG GE+REFWVMGGYGESRTISG+FP+DEYYRDAVVMEL+N    GRWR++
Sbjct: 234 FRAGCAGFFVGEGEEREFWVMGGYGESRTISGVFPIDEYYRDAVVMELKNGNGCGRWREL 293

Query: 181 GDMWEEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLR 216
           GDMWEEGER RLGK+VVIE+  +RG+P +FMLDG++  R
Sbjct: 294 GDMWEEGERVRLGKVVVIEDGDDRGRPAVFMLDGNDIFR 332

[Close]

BLAST of Csa3G389870 vs. NCBI nr
Match: gi|595792285|ref|XP_007199891.1| (hypothetical protein PRUPE_ppa006564mg [Prunus persica])

HSP 1 Score: 357.1 bits (915), Expect = 2.6e-95
Identity = 164/219 (74.89%), Postives = 193/219 (88.13%), Query Frame = 1


Query: 1   MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSFPIGRPSSSSSAFRFDFHSSFWEPIS 60
           MPCNPHVYGLCNFT +S+GPHLYVIGGSLFDTRSFPI RPS SS+ FRFDF++S W+ ++
Sbjct: 91  MPCNPHVYGLCNFTSLSIGPHLYVIGGSLFDTRSFPIDRPSPSSAVFRFDFNTSSWDFLA 150

Query: 61  SMLSPRGSFACAAIHDSSQILVAGGGSRHRLFAAAGSRMSSVERYDVERDEWVALDGLPT 120
            ML+PRGSFACAA+  S +ILVAGGGSRH LF+AAGSRM+SVERYD+ R+EWVA+DGLP 
Sbjct: 151 PMLTPRGSFACAAVPSSGEILVAGGGSRHTLFSAAGSRMTSVERYDIGRNEWVAMDGLPG 210

Query: 121 LRAGCVGFFVGNGEKREFWVMGGYGESRTISGMFPVDEYYRDAVVMELRN----GRWRQI 180
            RAGC GFFVG GE+REFWVMGGYGESRTISG+FP+DEYYRDAVVMEL+N    GRWR++
Sbjct: 211 FRAGCAGFFVGEGEEREFWVMGGYGESRTISGVFPIDEYYRDAVVMELKNGNSGGRWREL 270

Query: 181 GDMWEEGERRRLGKIVVIENHRNRGKPGIFMLDGDEFLR 216
           GDMWEEGER RLGK+VVIE+  +RG+P +FMLDG++  R
Sbjct: 271 GDMWEEGERVRLGKVVVIEDGDDRGRPAVFMLDGNDIFR 309

The following BLAST results are available for this feature:

BLAST of Csa3G389870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FK125_ARATH	1.9e-74	62.39	F-box/kelch-repeat protein OR23 OS=Arabidopsis thaliana GN=OR23 PE=2 SV=1	[more]

BLAST of Csa3G389870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LB80_CUCSA	8.7e-143	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G389870 PE=4 SV=1	[more]
M5W2T5_PRUPE	1.8e-95	74.89	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006564mg PE=4 SV=1	[more]
W9S979_9ROSA	1.0e-90	72.56	F-box/kelch-repeat protein OS=Morus notabilis GN=L484_009770 PE=4 SV=1	[more]
F6HZH3_VITVI	8.5e-90	72.40	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g02960 PE=4 SV=...	[more]
A5CBV5_VITVI	3.2e-89	72.81	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027398 PE=4 SV=1	[more]

BLAST of Csa3G389870 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G03030.1	1.1e-75	62.39	Galactose oxidase/kelch repeat superfamily protein	[more]

BLAST of Csa3G389870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202784\|gb\|KGN57917.1\|	1.2e-142	100.00	hypothetical protein Csa_3G389870 [Cucumis sativus]	[more]
gi\|449468544\|ref\|XP_004151981.1\|	1.3e-123	100.00	PREDICTED: F-box/kelch-repeat protein OR23 [Cucumis sativus]	[more]
gi\|659123887\|ref\|XP_008461887.1\|	2.6e-116	93.02	PREDICTED: F-box/kelch-repeat protein OR23 [Cucumis melo]	[more]
gi\|645260204\|ref\|XP_008235722.1\|	2.6e-95	74.89	PREDICTED: F-box/kelch-repeat protein OR23 [Prunus mume]	[more]
gi\|595792285\|ref\|XP_007199891.1\|	2.6e-95	74.89	hypothetical protein PRUPE_ppa006564mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006652	Kelch_1
IPR015915	Kelch-typ_b-propeller

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU120407	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G389870.1	Csa3G389870.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU120407	CU120407	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006652	Kelch repeat type 1	PFAM	PF01344	Kelch_1	coord: 78..115 score: 4.5E-6coord: 10..62 score: 2.
IPR006652	Kelch repeat type 1	SMART	SM00612	kelc_smart	coord: 21..76 score: 7.7E-7coord: 79..132 score: 0
IPR015915	Kelch-type beta propeller	GENE3D	G3DSA:2.120.10.80		coord: 10..196 score: 5.0
None	No IPR available	PANTHER	PTHR24412	FAMILY NOT NAMED	coord: 1..215 score: 9.2
None	No IPR available	PANTHER	PTHR24412:SF213	F-BOX/KELCH-REPEAT PROTEIN OR23	coord: 1..215 score: 9.2
None	No IPR available	unknown	SSF117281	Kelch motif	coord: 7..194 score: 4.84

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G389870	CSPI03G22640	Wild cucumber (PI 183967)	cpicuB120
Csa3G389870	CsGy3G021660	Cucumber (Gy14) v2	cgybcuB109

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G389870	Cucurbita maxima (Rimu)	cmacuB515
Csa3G389870	Cucurbita maxima (Rimu)	cmacuB594
Csa3G389870	Cucurbita maxima (Rimu)	cmacuB890
Csa3G389870	Cucurbita moschata (Rifu)	cmocuB506
Csa3G389870	Cucurbita moschata (Rifu)	cmocuB582
Csa3G389870	Melon (DHL92) v3.5.1	cumeB213
Csa3G389870	Melon (DHL92) v3.5.1	cumeB240
Csa3G389870	Watermelon (Charleston Gray)	cuwcgB257
Csa3G389870	Watermelon (97103) v1	cuwmB220
Csa3G389870	Watermelon (97103) v1	cuwmB240
Csa3G389870	Watermelon (97103) v1	cuwmB282
Csa3G389870	Cucurbita pepo (Zucchini)	cpecuB244
Csa3G389870	Cucurbita pepo (Zucchini)	cpecuB723
Csa3G389870	Bottle gourd (USVL1VR-Ls)	culsiB216
Csa3G389870	Bottle gourd (USVL1VR-Ls)	culsiB222
Csa3G389870	Cucumber (Gy14) v2	cgybcuB117
Csa3G389870	Melon (DHL92) v3.6.1	cumedB198
Csa3G389870	Melon (DHL92) v3.6.1	cumedB235
Csa3G389870	Silver-seed gourd	carcuB0769
Csa3G389870	Silver-seed gourd	carcuB0794
Csa3G389870	Watermelon (97103) v2	cuwmbB211
Csa3G389870	Watermelon (97103) v2	cuwmbB234
Csa3G389870	Watermelon (97103) v2	cuwmbB243
Csa3G389870	Wax gourd	cuwgoB304
Csa3G389870	Cucumber (Chinese Long) v2	cucuB055
Csa3G389870	Cucumber (Chinese Long) v2	cucuB087
Csa3G389870	Cucumber (Gy14) v1	cgycuB037