Csa3G379760 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G379760
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 18695632 .. 18696048 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAAAGAAGAAACAGAAAATGGGTATTGCTTAGTTCATATATGGCCGGAGATGGAAGGAAAATGGAGGAGAGAAAGACAGGTAATTTCGGTTGGTTTACGCGGTAAGTGGAAGAGGCTTTGTCATCACCATGGGCATTGGGCTACAGCTGCATTCTGTCGGTGGACTATACCCTCTTCCCAACGCTAGTGAAGATGCTTTAATCCGTCTGTGATTGGCCCATTAATTCTTGACTCCAATCTTAAATAAACCTTCATTAAGTTTTACTATTGAAGATGGGGATTGGATGAATCACCTAAATAATTATGTCCCCCTACCTTAATCCTTACTAATATGCTCTATCACCTTTCTTCTTGATAATAATCAAATAACTAAACAAAAAAAAAACTAATAATCTAATCAATTCAATCACCC

mRNA sequence

ATGGGAAAAGAAGAAACAGAAAATGGGTATTGCTTAGTTCATATATGGCCGGAGATGGAAGGAAAATGGAGGAGAGAAAGACAGCTGCATTCTGTCGGTGGACTATACCCTCTTCCCAACGCTAGTGAAGATGCTTTAATCCGTCTGTGA

Coding sequence (CDS)

ATGGGAAAAGAAGAAACAGAAAATGGGTATTGCTTAGTTCATATATGGCCGGAGATGGAAGGAAAATGGAGGAGAGAAAGACAGCTGCATTCTGTCGGTGGACTATACCCTCTTCCCAACGCTAGTGAAGATGCTTTAATCCGTCTGTGA

Protein sequence

MGKEETENGYCLVHIWPEMEGKWRRERQLHSVGGLYPLPNASEDALIRL*
Homology
[Close]
BLAST of Csa3G379760 vs. TrEMBL
Match: A0A0A0LAA2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G379760 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-21
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 1  MGKEETENGYCLVHIWPEMEGKWRRERQLHSVGGLYPLPNASEDALIRL 50
          MGKEETENGYCLVHIWPEMEGKWRRERQLHSVGGLYPLPNASEDALIRL
Sbjct: 1  MGKEETENGYCLVHIWPEMEGKWRRERQLHSVGGLYPLPNASEDALIRL 49

[Close]
BLAST of Csa3G379760 vs. NCBI nr
Match: gi|700202766|gb|KGN57899.1| (hypothetical protein Csa_3G379760 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 2.4e-21
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 1  MGKEETENGYCLVHIWPEMEGKWRRERQLHSVGGLYPLPNASEDALIRL 50
          MGKEETENGYCLVHIWPEMEGKWRRERQLHSVGGLYPLPNASEDALIRL
Sbjct: 1  MGKEETENGYCLVHIWPEMEGKWRRERQLHSVGGLYPLPNASEDALIRL 49

The following BLAST results are available for this feature:
BLAST of Csa3G379760 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAA2_CUCSA1.7e-21100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G379760 PE=4 SV=1[more]
BLAST of Csa3G379760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202766|gb|KGN57899.1|2.4e-21100.00hypothetical protein Csa_3G379760 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU111202cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G379760.1Csa3G379760.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU111202CU111202transcribed_cluster