Csa3G342360 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G342360
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 17950854 .. 17951169 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGGCTGGCAAAGGAAGATTGACTCAGATGGATTTGCAAGGATGGTTCGGGTAAAAGGTGACTAGCGCGTGCGGCTTGATCTAATGAGTTTGGCTTGCGACGGTAGCTTGGGAAGGACGATAAACAGAGGTGGAGACGTCGTCAGAGTTCAGTGTCATACAGTGGAGAAACGTCAAGACTGATCTTCAGTTTCGGTTTGTTCCAGCTCAGTGGACGAAGGAGAATCAGGCGGAAGAGGAGAGTTACGACTTCGGCTTCAGCTTTGCTGTAACGGACGAAGAGAGGGCAACACGACTGAGACCCACGCGTTGA

mRNA sequence

ATGGTCGGCTGGCAAAGGAAGATTGACTCAGATGGATTTGCAAGGATGGTTCGGGTAAAAGAGGTGGAGACGTCGTCAGAGTTCAGTGTCATACAGTGGAGAAACGTCAAGACTGATCTTCAGTTTCGGTTTGTTCCAGCTCAGTGGACGAAGGAGAATCAGGCGGAAGAGGAGAGTTACGACTTCGGCTTCAGCTTTGCTGTAACGGACGAAGAGAGGGCAACACGACTGAGACCCACGCGTTGA

Coding sequence (CDS)

ATGGTCGGCTGGCAAAGGAAGATTGACTCAGATGGATTTGCAAGGATGGTTCGGGTAAAAGAGGTGGAGACGTCGTCAGAGTTCAGTGTCATACAGTGGAGAAACGTCAAGACTGATCTTCAGTTTCGGTTTGTTCCAGCTCAGTGGACGAAGGAGAATCAGGCGGAAGAGGAGAGTTACGACTTCGGCTTCAGCTTTGCTGTAACGGACGAAGAGAGGGCAACACGACTGAGACCCACGCGTTGA

Protein sequence

MVGWQRKIDSDGFARMVRVKEVETSSEFSVIQWRNVKTDLQFRFVPAQWTKENQAEEESYDFGFSFAVTDEERATRLRPTR*
Homology
[Close]
BLAST of Csa3G342360 vs. TrEMBL
Match: A0A0A0L7Q0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342360 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 6.6e-39
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1 

Query: 1  MVGWQRKIDSDGFARMVRVKEVETSSEFSVIQWRNVKTDLQFRFVPAQWTKENQAEEESY 60
          MVGWQRKIDSDGFARMVRVKEVETSSEFSVIQWRNVKTDLQFRFVPAQWTKENQAEEESY
Sbjct: 1  MVGWQRKIDSDGFARMVRVKEVETSSEFSVIQWRNVKTDLQFRFVPAQWTKENQAEEESY 60

Query: 61 DFGFSFAVTDEERATRLRPTR 82
          DFGFSFAVTDEERATRLRPTR
Sbjct: 61 DFGFSFAVTDEERATRLRPTR 81

[Close]
BLAST of Csa3G342360 vs. NCBI nr
Match: gi|700202700|gb|KGN57833.1| (hypothetical protein Csa_3G342360 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 9.4e-39
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1 

Query: 1  MVGWQRKIDSDGFARMVRVKEVETSSEFSVIQWRNVKTDLQFRFVPAQWTKENQAEEESY 60
          MVGWQRKIDSDGFARMVRVKEVETSSEFSVIQWRNVKTDLQFRFVPAQWTKENQAEEESY
Sbjct: 1  MVGWQRKIDSDGFARMVRVKEVETSSEFSVIQWRNVKTDLQFRFVPAQWTKENQAEEESY 60

Query: 61 DFGFSFAVTDEERATRLRPTR 82
          DFGFSFAVTDEERATRLRPTR
Sbjct: 61 DFGFSFAVTDEERATRLRPTR 81

The following BLAST results are available for this feature:
BLAST of Csa3G342360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7Q0_CUCSA6.6e-39100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342360 PE=4 SV=1[more]
BLAST of Csa3G342360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202700|gb|KGN57833.1|9.4e-39100.00hypothetical protein Csa_3G342360 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G342360.1Csa3G342360.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G342360Cucurbita moschata (Rifu)cmocuB229
Csa3G342360Cucurbita moschata (Rifu)cmocuB442
Csa3G342360Melon (DHL92) v3.5.1cumeB246
Csa3G342360Watermelon (Charleston Gray)cuwcgB233
Csa3G342360Watermelon (97103) v1cuwmB245
Csa3G342360Cucurbita pepo (Zucchini)cpecuB547
Csa3G342360Cucurbita pepo (Zucchini)cpecuB600
Csa3G342360Bottle gourd (USVL1VR-Ls)culsiB212
Csa3G342360Cucumber (Gy14) v2cgybcuB109
Csa3G342360Melon (DHL92) v3.6.1cumedB239
Csa3G342360Silver-seed gourdcarcuB0780
Csa3G342360Watermelon (97103) v2cuwmbB218
Csa3G342360Wax gourdcuwgoB299
Csa3G342360Cucumber (Gy14) v1cgycuB290
Csa3G342360Cucurbita maxima (Rimu)cmacuB242
Csa3G342360Cucurbita maxima (Rimu)cmacuB455