Csa3G333850 (gene) Cucumber (Chinese Long) v2

NameCsa3G333850
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 17847774 .. 17848116 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTACCGGCAGCGTCTCTCTCTATCACTTTGAAGCTGAACGTTTCGTCTCCGTCGTCGTCGTCTGCTCGAAGCTGGCCATTCCGCTCCATCATTTTCCATGAAGCATCAGCATCCTCCGTCGCGTCCTCAGTCTCCGTTCAGCGTACTCCGACCATCTCTTTCTGCCTCTGTCTGGCTCAGGTGTAGTCACGTTCGCGAGCCGTTTTTGCCATTTAAGTCTACTTGATTTTGCACCTGAGCCATGAAGCCCCTCTCCCTTGGTGTGAGCCATTTGCCTTTCTCCTAGCCGAGTCGCATCTCTTCTCCAAGTCAAGCTGCATATTTGGTATCTTTTGAGTAA

mRNA sequence

ATGCTACCGGCAGCGTCTCTCTCTATCACTTTGAAGCTGAACGTTTCGTCTCCGTCGTCGTCGTCTGCTCGAAGCTGGCCATTCCGCTCCATCATTTTCCATGAAGCATCAGCATCCTCCGTCGCGTCCTCAGTCTCCGTTCAGCGTACTCCGACCATCTCTTTCTGCCTCTGTCTGGCTCAGCCGAGTCGCATCTCTTCTCCAAGTCAAGCTGCATATTTGGTATCTTTTGAGTAA

Coding sequence (CDS)

ATGCTACCGGCAGCGTCTCTCTCTATCACTTTGAAGCTGAACGTTTCGTCTCCGTCGTCGTCGTCTGCTCGAAGCTGGCCATTCCGCTCCATCATTTTCCATGAAGCATCAGCATCCTCCGTCGCGTCCTCAGTCTCCGTTCAGCGTACTCCGACCATCTCTTTCTGCCTCTGTCTGGCTCAGCCGAGTCGCATCTCTTCTCCAAGTCAAGCTGCATATTTGGTATCTTTTGAGTAA

Protein sequence

MLPAASLSITLKLNVSSPSSSSARSWPFRSIIFHEASASSVASSVSVQRTPTISFCLCLAQPSRISSPSQAAYLVSFE*
BLAST of Csa3G333850 vs. TrEMBL
Match: A0A0A0LAY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G333850 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.0e-33
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1

Query: 1  MLPAASLSITLKLNVSSPSSSSARSWPFRSIIFHEASASSVASSVSVQRTPTISFCLCLA 60
          MLPAASLSITLKLNVSSPSSSSARSWPFRSIIFHEASASSVASSVSVQRTPTISFCLCLA
Sbjct: 1  MLPAASLSITLKLNVSSPSSSSARSWPFRSIIFHEASASSVASSVSVQRTPTISFCLCLA 60

Query: 61 QPSRISSPSQAAYLVSFE 79
          QPSRISSPSQAAYLVSFE
Sbjct: 61 QPSRISSPSQAAYLVSFE 78

BLAST of Csa3G333850 vs. NCBI nr
Match: gi|700202694|gb|KGN57827.1| (hypothetical protein Csa_3G333850 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 1.5e-33
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1

Query: 1  MLPAASLSITLKLNVSSPSSSSARSWPFRSIIFHEASASSVASSVSVQRTPTISFCLCLA 60
          MLPAASLSITLKLNVSSPSSSSARSWPFRSIIFHEASASSVASSVSVQRTPTISFCLCLA
Sbjct: 1  MLPAASLSITLKLNVSSPSSSSARSWPFRSIIFHEASASSVASSVSVQRTPTISFCLCLA 60

Query: 61 QPSRISSPSQAAYLVSFE 79
          QPSRISSPSQAAYLVSFE
Sbjct: 61 QPSRISSPSQAAYLVSFE 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LAY2_CUCSA1.0e-33100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G333850 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700202694|gb|KGN57827.1|1.5e-33100.00hypothetical protein Csa_3G333850 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G333850.1Csa3G333850.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None