Csa3G319300 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G319300
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 17698031 .. 17698258 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATGTCGATCCAAGAAGAGAATGGTGACGAACAGATAACGGGAAATTTACCCAAAGATGAAGATGTCGATCCAAGAAGAGAATGGCGACGAACAGAGAACGGAGAACGAACCCACGTGAACTCGTGTAGGAGGAAGACGAATGAAGGACTGGCGAAGGACGAAGACGAAGGACGAAGAAGTGCGAACTGCAGGAGGGAATACGTTAAAGATATACTTTCTTAA

mRNA sequence

ATGAAGATGTCGATCCAAGAAGAGAATGGTGACGAACAGATAACGGGAAATTTACCCAAAGATGAAGATGTCGATCCAAGAAGAGAATGGCGACGAACAGAGAACGGAGAACGAACCCACGTGAACTCGTGTAGGAGGAAGACGAATGAAGGACTGGCGAAGGACGAAGACGAAGGACGAAGAAGTGCGAACTGCAGGAGGGAATACGTTAAAGATATACTTTCTTAA

Coding sequence (CDS)

ATGAAGATGTCGATCCAAGAAGAGAATGGTGACGAACAGATAACGGGAAATTTACCCAAAGATGAAGATGTCGATCCAAGAAGAGAATGGCGACGAACAGAGAACGGAGAACGAACCCACGTGAACTCGTGTAGGAGGAAGACGAATGAAGGACTGGCGAAGGACGAAGACGAAGGACGAAGAAGTGCGAACTGCAGGAGGGAATACGTTAAAGATATACTTTCTTAA

Protein sequence

MKMSIQEENGDEQITGNLPKDEDVDPRREWRRTENGERTHVNSCRRKTNEGLAKDEDEGRRSANCRREYVKDILS*
Homology
[Close]
BLAST of Csa3G319300 vs. TrEMBL
Match: A0A0A0L7N2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G319300 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.2e-36
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 1  MKMSIQEENGDEQITGNLPKDEDVDPRREWRRTENGERTHVNSCRRKTNEGLAKDEDEGR 60
          MKMSIQEENGDEQITGNLPKDEDVDPRREWRRTENGERTHVNSCRRKTNEGLAKDEDEGR
Sbjct: 1  MKMSIQEENGDEQITGNLPKDEDVDPRREWRRTENGERTHVNSCRRKTNEGLAKDEDEGR 60

Query: 61 RSANCRREYVKDILS 76
          RSANCRREYVKDILS
Sbjct: 61 RSANCRREYVKDILS 75

[Close]
BLAST of Csa3G319300 vs. NCBI nr
Match: gi|700202685|gb|KGN57818.1| (hypothetical protein Csa_3G319300 [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 3.1e-36
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 1  MKMSIQEENGDEQITGNLPKDEDVDPRREWRRTENGERTHVNSCRRKTNEGLAKDEDEGR 60
          MKMSIQEENGDEQITGNLPKDEDVDPRREWRRTENGERTHVNSCRRKTNEGLAKDEDEGR
Sbjct: 1  MKMSIQEENGDEQITGNLPKDEDVDPRREWRRTENGERTHVNSCRRKTNEGLAKDEDEGR 60

Query: 61 RSANCRREYVKDILS 76
          RSANCRREYVKDILS
Sbjct: 61 RSANCRREYVKDILS 75

The following BLAST results are available for this feature:
BLAST of Csa3G319300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7N2_CUCSA2.2e-36100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G319300 PE=4 SV=1[more]
BLAST of Csa3G319300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202685|gb|KGN57818.1|3.1e-36100.00hypothetical protein Csa_3G319300 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G319300.1Csa3G319300.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G319300CSPI03G21560Wild cucumber (PI 183967)cpicuB120
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G319300Watermelon (97103) v2cuwmbB218
Csa3G319300Wax gourdcuwgoB271
Csa3G319300Wax gourdcuwgoB299
Csa3G319300Cucurbita maxima (Rimu)cmacuB242
Csa3G319300Cucurbita maxima (Rimu)cmacuB455
Csa3G319300Cucurbita moschata (Rifu)cmocuB229
Csa3G319300Cucurbita moschata (Rifu)cmocuB442
Csa3G319300Melon (DHL92) v3.5.1cumeB246
Csa3G319300Watermelon (Charleston Gray)cuwcgB233
Csa3G319300Watermelon (97103) v1cuwmB245
Csa3G319300Cucurbita pepo (Zucchini)cpecuB547
Csa3G319300Cucurbita pepo (Zucchini)cpecuB600
Csa3G319300Bottle gourd (USVL1VR-Ls)culsiB212
Csa3G319300Cucumber (Gy14) v2cgybcuB109
Csa3G319300Melon (DHL92) v3.6.1cumedB239
Csa3G319300Silver-seed gourdcarcuB0780