Csa3G279920 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G279920
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 16587544 .. 16587725 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGGGATGATAAGATCGATGATGGCGAAGATGATCGAAGAGGAGTCAGAAACGTAGGTGGACTTGTCAGACGTTGATTGTGAGGAAGAAAATGGAGGTGAAAGTGAGACCGAGACGGAGGATATGGACGTCGATTGCGAGGACTGAGGTGAGGGAGACGACTAAGGCAGACGACTGA

mRNA sequence

ATGGATGGGGATGATAAGATCGATGATGGCGAAGATGATCGAAGAGGAACGTTGATTGTGAGGAAGAAAATGGAGGTGAAAGTGAGACCGAGACGGAGGATATGGACGTCGATTGCGAGGACTGAGGTGAGGGAGACGACTAAGGCAGACGACTGA

Coding sequence (CDS)

ATGGATGGGGATGATAAGATCGATGATGGCGAAGATGATCGAAGAGGAACGTTGATTGTGAGGAAGAAAATGGAGGTGAAAGTGAGACCGAGACGGAGGATATGGACGTCGATTGCGAGGACTGAGGTGAGGGAGACGACTAAGGCAGACGACTGA

Protein sequence

MDGDDKIDDGEDDRRGTLIVRKKMEVKVRPRRRIWTSIARTEVRETTKADD*
Homology
[Close]
BLAST of Csa3G279920 vs. TrEMBL
Match: A0A0A0LAQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G279920 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.5e-20
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1 

Query: 1  MDGDDKIDDGEDDRRGTLIVRKKMEVKVRPRRRIWTSIARTEVRETTKADD 52
          MDGDDKIDDGEDDRRGTLIVRKKMEVKVRPRRRIWTSIARTEVRETTKADD
Sbjct: 1  MDGDDKIDDGEDDRRGTLIVRKKMEVKVRPRRRIWTSIARTEVRETTKADD 51

[Close]
BLAST of Csa3G279920 vs. NCBI nr
Match: gi|700202619|gb|KGN57752.1| (hypothetical protein Csa_3G279920 [Cucumis sativus])

HSP 1 Score: 105.9 bits (263), Expect = 2.1e-20
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1 

Query: 1  MDGDDKIDDGEDDRRGTLIVRKKMEVKVRPRRRIWTSIARTEVRETTKADD 52
          MDGDDKIDDGEDDRRGTLIVRKKMEVKVRPRRRIWTSIARTEVRETTKADD
Sbjct: 1  MDGDDKIDDGEDDRRGTLIVRKKMEVKVRPRRRIWTSIARTEVRETTKADD 51

The following BLAST results are available for this feature:
BLAST of Csa3G279920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAQ1_CUCSA1.5e-20100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G279920 PE=4 SV=1[more]
BLAST of Csa3G279920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202619|gb|KGN57752.1|2.1e-20100.00hypothetical protein Csa_3G279920 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G279920.1Csa3G279920.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G279920Cucumber (Gy14) v2cgybcuB109
Csa3G279920Melon (DHL92) v3.6.1cumedB228
Csa3G279920Silver-seed gourdcarcuB0513
Csa3G279920Silver-seed gourdcarcuB0780
Csa3G279920Watermelon (97103) v2cuwmbB213
Csa3G279920Watermelon (97103) v2cuwmbB218
Csa3G279920Wax gourdcuwgoB271
Csa3G279920Cucumber (Gy14) v1cgycuB003
Csa3G279920Cucurbita maxima (Rimu)cmacuB242
Csa3G279920Cucurbita maxima (Rimu)cmacuB455
Csa3G279920Cucurbita moschata (Rifu)cmocuB229
Csa3G279920Cucurbita moschata (Rifu)cmocuB442
Csa3G279920Melon (DHL92) v3.5.1cumeB161
Csa3G279920Watermelon (Charleston Gray)cuwcgB229
Csa3G279920Watermelon (Charleston Gray)cuwcgB233
Csa3G279920Watermelon (97103) v1cuwmB245
Csa3G279920Cucurbita pepo (Zucchini)cpecuB547
Csa3G279920Cucurbita pepo (Zucchini)cpecuB600
Csa3G279920Bottle gourd (USVL1VR-Ls)culsiB212