Csa3G278920 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G278920
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionLOB domain-containing protein; contains IPR004883 (Lateral organ boundaries, LOB)
LocationChr3 : 16580464 .. 16582069 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAAATATCCTCTATACCTCTCTACTTTCTCTTTTATATCTTCCAAACCCTTTTCCCCCAATTTTCATTCTCTCTCTCCACACTTGCTTCTTCCCATTTTATGCTTCCCTTCTCCCATTGCTGTTCTTCTTCAAAATGCGGATGAGTTGTAATGGTTGCAGAGTCCTTCGCAAAGGTTGCAGTGAAAATTGCAGTATTCGTCCTTGCTTGCAGTGGATCAAGTCCCCTGAATCTCAGGCTAATGCTACCGTTTTTCTTGCCAAGTTTTACGGCCGTGCTGGACTTATGAATCTCATCAACGCCGGTCCTGATCATCTCCGTCCTGGTTAGTTCAATTTCTCTTTTCTTCTCTCATCTTTCATTTAGGTTTTCTTTCTTTCTGCCTTTTCATTGATTTTTCCATTTTCCTTTTCATTTTGCAGCCATTTTTAGATCTCTTCTCTACGAGGCTTGTGGAAGGATTGTGAATCCCATTTACGGATCGGTTGGATTGTTGTGGTCTGGTAGTTGGCAGCTTTGTCAAGCGGCTGTTGAGGCCGTACTTAAAGGTGCTCCGATCACGCCGATCAACTCCGAGGCAGCGACTACTGGCGATGGACCGCCCTTGAAAGCCTACGACATTCGTCACGTTTCCAAGGATGAAAACTCTGTCGCCTCCAACGACGGTGGAGCCAATCGGCCAGTCAAGACGCGTTGCAGGTTCAAGCGGTCGTCTGTGAAGGCGAAAGCGAGTAAAGGAATCGCCTCCACCGTTGTTGATGAGTCGACTCGACCAGTCTGCTCTACCGAGTTGAACAGGTCGTCGAGTGGTGAGTCGTCGTTGAGTCACCAATCAGATTCGCGACATCTGGAGAACGAGAGTAAAGAAACCGAGAGCATGATTTCAGTGGAGACGGCAGAGGTTTCTCCTCGTCCGGCGCAGTCGGTTTTGTTCCGATCGGAATCAACGGGGGGGCGCGAGGGCGTTTCAGTGCCAATTCCGCCAAGTGAATTAGCTCTGGAATTAACCCTGGGGATGGAGCCGGTGTTACGTGCCCAGCACGTGATTCCAATGAAAAAACGAAAGATAGAAGCCGAAGTTGGGTTGAGGCCCAAAAGCGAGACGTGCAATACCGTTTTAGGCCTTGATTTTGCAGCCTGAAATGGAGGCCCAGTAATGAGCCCAAGCACATAACAGCGACAATAATAATAATAATAATAATAAGAGAAAGAGAAATAAGAATAAAAAGAGAGTACAATTTTGACGGCGGGGATTTGCTATCTTCGGTGGAAAAGAAGAGAAGAGATCTCGACCATTTGTTTAGTTGGTTCCTTTGTTTTGACGTTTAGTCTTCATTTAATTTTACTGTTTTAACCCTGTCACCTTTTGTAACGAGAAGCGGTTGTGTTGTGTATAAAAAAAGTGGTCGCAATGTGTATAGGAAGGAATTTGCTGTAAAAATGCATCAGAAGGCGAAAAGGTTTTTAGGTTTTCTTTTTTCTTTTTAATTTTCTTAAAATATTTTTATGTTTGGTATCGAATAACGGAAATTCAGCATTAATTTAAAGCTTGTTTAAAATGAATTTATATATACTAATATTACACATGCTTCACAACCCTTCCAAT

mRNA sequence

ATGCGGATGAGTTGTAATGGTTGCAGAGTCCTTCGCAAAGGTTGCAGTGAAAATTGCAGTATTCGTCCTTGCTTGCAGTGGATCAAGTCCCCTGAATCTCAGGCTAATGCTACCGTTTTTCTTGCCAAGTTTTACGGCCGTGCTGGACTTATGAATCTCATCAACGCCGGTCCTGATCATCTCCGTCCTGCCATTTTTAGATCTCTTCTCTACGAGGCTTGTGGAAGGATTGTGAATCCCATTTACGGATCGGTTGGATTGTTGTGGTCTGGTAGTTGGCAGCTTTGTCAAGCGGCTGTTGAGGCCGTACTTAAAGGTGCTCCGATCACGCCGATCAACTCCGAGGCAGCGACTACTGGCGATGGACCGCCCTTGAAAGCCTACGACATTCGTCACGTTTCCAAGGATGAAAACTCTGTCGCCTCCAACGACGGTGGAGCCAATCGGCCAGTCAAGACGCGTTGCAGGTTCAAGCGGTCGTCTGTGAAGGCGAAAGCGAGTAAAGGAATCGCCTCCACCGTTGTTGATGAGTCGACTCGACCAGTCTGCTCTACCGAGTTGAACAGGTCGTCGAGTGGTGAGTCGTCGTTGAGTCACCAATCAGATTCGCGACATCTGGAGAACGAGAGTAAAGAAACCGAGAGCATGATTTCAGTGGAGACGGCAGAGGTTTCTCCTCGTCCGGCGCAGTCGGTTTTGTTCCGATCGGAATCAACGGGGGGGCGCGAGGGCGTTTCAGTGCCAATTCCGCCAAGTGAATTAGCTCTGGAATTAACCCTGGGGATGGAGCCGGTGTTACGTGCCCAGCACGTGATTCCAATGAAAAAACGAAAGATAGAAGCCGAAGTTGGGTTGAGGCCCAAAAGCGAGACGTGCAATACCGTTTTAGGCCTTGATTTTGCAGCCTGA

Coding sequence (CDS)

ATGCGGATGAGTTGTAATGGTTGCAGAGTCCTTCGCAAAGGTTGCAGTGAAAATTGCAGTATTCGTCCTTGCTTGCAGTGGATCAAGTCCCCTGAATCTCAGGCTAATGCTACCGTTTTTCTTGCCAAGTTTTACGGCCGTGCTGGACTTATGAATCTCATCAACGCCGGTCCTGATCATCTCCGTCCTGCCATTTTTAGATCTCTTCTCTACGAGGCTTGTGGAAGGATTGTGAATCCCATTTACGGATCGGTTGGATTGTTGTGGTCTGGTAGTTGGCAGCTTTGTCAAGCGGCTGTTGAGGCCGTACTTAAAGGTGCTCCGATCACGCCGATCAACTCCGAGGCAGCGACTACTGGCGATGGACCGCCCTTGAAAGCCTACGACATTCGTCACGTTTCCAAGGATGAAAACTCTGTCGCCTCCAACGACGGTGGAGCCAATCGGCCAGTCAAGACGCGTTGCAGGTTCAAGCGGTCGTCTGTGAAGGCGAAAGCGAGTAAAGGAATCGCCTCCACCGTTGTTGATGAGTCGACTCGACCAGTCTGCTCTACCGAGTTGAACAGGTCGTCGAGTGGTGAGTCGTCGTTGAGTCACCAATCAGATTCGCGACATCTGGAGAACGAGAGTAAAGAAACCGAGAGCATGATTTCAGTGGAGACGGCAGAGGTTTCTCCTCGTCCGGCGCAGTCGGTTTTGTTCCGATCGGAATCAACGGGGGGGCGCGAGGGCGTTTCAGTGCCAATTCCGCCAAGTGAATTAGCTCTGGAATTAACCCTGGGGATGGAGCCGGTGTTACGTGCCCAGCACGTGATTCCAATGAAAAAACGAAAGATAGAAGCCGAAGTTGGGTTGAGGCCCAAAAGCGAGACGTGCAATACCGTTTTAGGCCTTGATTTTGCAGCCTGA

Protein sequence

MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTGDGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTRPVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTGGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLDFAA*
Homology
[Close]
BLAST of Csa3G278920 vs. Swiss-Prot
Match: LBD41_ARATH (LOB domain-containing protein 41 OS=Arabidopsis thaliana GN=LBD41 PE=2 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 4.4e-81
Identity = 172/300 (57.33%), Postives = 199/300 (66.33%), Query Frame = 1 

Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSE+CSIRPCL WIKSPE+QANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120
           LRP IFRSLL+EACGRIVNPIYGSVGLLWSG+WQLCQ AVEAV+KG P+  I ++AAT G
Sbjct: 61  LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120

Query: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 180
            GPPLK YDIRH+SKD+NS A+  G  +  +    R KR            STV  ++  
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRRAKR-----------VSTVAIQAES 180

Query: 181 PVCSTELNRSSSGESSLSHQSD--SRHLENESKETESMISVETAEVSPRPAQSVLFRSES 240
              S E    +S +SSLSHQS+  + H E ESKE+ES +S E    SP   +        
Sbjct: 181 EGKSDE----ASHDSSLSHQSEIVAAH-EGESKESESNVS-EVLAFSPPAVKG------- 240

Query: 241 TGGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGL 299
                         E+ L+LTL +EPV RA HV+P+KKR+I    G   K  TC T L L
Sbjct: 241 ------------SGEIKLDLTLRLEPVSRAYHVVPVKKRRI-GVFGTCQKESTCKTELML 263

[Close]
BLAST of Csa3G278920 vs. Swiss-Prot
Match: LBD40_ARATH (LOB domain-containing protein 40 OS=Arabidopsis thaliana GN=LBD40 PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.5e-65
Identity = 125/180 (69.44%), Postives = 136/180 (75.56%), Query Frame = 1 

Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKS ESQANATVFLAKFYGRAGLMNL+N GPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSG+W LCQAAVEAV++G+P+TPI  +AA TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTG 120

Query: 121 DGPPL--KAYDIRHV-SKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDE 178
             PP   K  DIRHV S+DEN    + G        R     SS+  ++      T  +E
Sbjct: 121 QAPPFNNKLCDIRHVSSRDENVKRRSRGACKEERNVRSLSHESSLSHESPVSSEETTTEE 180


HSP 2 Score: 48.9 bits (115), Expect = 1.1e-04
Identity = 28/63 (44.44%), Postives = 34/63 (53.97%), Query Frame = 1 

Query: 237 ESTGGREGVSVPIPPSELALELTLGMEPVLRAQH-VIPMKKRKIEAEVGLRPKSETCNTV 296
           ES    E  +   P + + LELTLG+EP+ R  H V+PMKKRK+E   G     +TC   
Sbjct: 168 ESPVSSEETTTEEPKTWIGLELTLGLEPLARGNHVVVPMKKRKLE-RCGTSEDEDTCKIE 227

Query: 297 LGL 299
           LGL
Sbjct: 228 LGL 229

[Close]
BLAST of Csa3G278920 vs. Swiss-Prot
Match: LBD42_ARATH (LOB domain-containing protein 42 OS=Arabidopsis thaliana GN=LBD42 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.6e-57
Identity = 111/170 (65.29%), Postives = 130/170 (76.47%), Query Frame = 1 

Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MR+SCNGCRVLRKGC+++C+IRPCLQWIKS +SQANAT+FLAKFYGRAGL+NLI +GPDH
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPI--TPINSEAAT 120
           LRPAIFRSLLYEACGRIVNP+ GSVGL+WSG+W  CQAAV+AVL G PI  TP+ S +A+
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 121 TGDGPPLKAYDIRHVSKDENSVASNDG------GANRPVKTRCRFKRSSV 163
               PP + YDIRHV+KD  +   +         AN+      RFKR SV
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKRESV 170

[Close]
BLAST of Csa3G278920 vs. Swiss-Prot
Match: LBD38_ARATH (LOB domain-containing protein 38 OS=Arabidopsis thaliana GN=LBD38 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.3e-44
Identity = 86/169 (50.89%), Postives = 116/169 (68.64%), Query Frame = 1 

Query: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDHLR 62
           MSCNGCRVLRKGCSENC +RPC+QWI+SPE+Q +ATVF+AKF+GRAGLM+ I+A P+   
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTGDG 122
           PA+F+SLLYEACGR VNP+ G+VGLLW+G+W +CQAAVE VL+G  + PI       G G
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPI--PELLNGGG 120

Query: 123 ----PPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKAS 168
               P   + +   +  +  ++   D   +R +   CRF  S  +++++
Sbjct: 121 FAGFPSPTSDEASEICTEMLNLRKADDSGDRNIYHHCRFSSSRSRSRST 167

[Close]
BLAST of Csa3G278920 vs. Swiss-Prot
Match: LBD37_ARATH (LOB domain-containing protein 37 OS=Arabidopsis thaliana GN=LBD37 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.6e-43
Identity = 90/192 (46.88%), Postives = 124/192 (64.58%), Query Frame = 1 

Query: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDHLR 62
           MSCNGCRVLRKGCSENC +RPC+QWI++ ++Q +ATVF+AKF+GRAGLM+ I+A PD  R
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTGDG 122
           PA+F+SLLYEACGR VNP+ G++G+LW+G+W +CQAAVE VL+G  + PI  E  T G G
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPI-PELLTHGGG 120

Query: 123 ----PPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDES 182
               P   + +   +  +  ++  ND   +R +    RF  S  ++       +     S
Sbjct: 121 FAGFPSPTSEEASEICTEMLNLQQND-STDRNIYHHSRFSSSRSRSTMDSSSPTKRKRLS 180

Query: 183 TRPVCSTELNRS 191
           +    S+EL+ S
Sbjct: 181 SEDQPSSELDLS 190

[Close]
BLAST of Csa3G278920 vs. TrEMBL
Match: A0A0A0LCG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G278920 PE=4 SV=1)

HSP 1 Score: 603.2 bits (1554), Expect = 1.7e-169
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 1 

Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120

Query: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 180
           DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR
Sbjct: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 180

Query: 181 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTG 240
           PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTG
Sbjct: 181 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTG 240

Query: 241 GREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLDF 300
           GREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLDF
Sbjct: 241 GREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLDF 300

Query: 301 AA 303
           AA
Sbjct: 301 AA 302

[Close]
BLAST of Csa3G278920 vs. TrEMBL
Match: W9RUX7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008640 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.7e-106
Identity = 213/312 (68.27%), Postives = 242/312 (77.56%), Query Frame = 1 

Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCR+LRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 1   MRMSCNGCRILRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSW LCQAAVEAVLKGAPITPI SEAA + 
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWHLCQAAVEAVLKGAPITPIASEAAAST 120

Query: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSS---VKAKASKGIASTVVDE 180
            GPPLKAYDIRHVSKDENS ASND    + VKTRCRFKR+    VK KA K    +   +
Sbjct: 121 HGPPLKAYDIRHVSKDENSAASND---PQKVKTRCRFKRTGTTVVKPKARKAGCGSTGQD 180

Query: 181 STRP----VCS--TELNRSSSGESSLSHQSDSRH-LENESKETESMISVETAEVSPRPAQ 240
           +  P     C+   ELNRS+S ESS+SHQS++ + ++ ESKETESMISVETAE +   A 
Sbjct: 181 TASPKWAGYCADVAELNRSTSHESSVSHQSEAVNVVDGESKETESMISVETAEPA---AA 240

Query: 241 SVLFRSESTGGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSE 300
           S+LFR+E       V   I  +E+ALELTLG+EP   A+HV+PMKKR+IEA      +  
Sbjct: 241 SLLFRAEPETVTTQVEESIRENEMALELTLGLEPTAHARHVVPMKKRRIEASGCGSGRDG 300

Query: 301 TCNTVLGLDFAA 303
            C   LGL+++A
Sbjct: 301 ACKVELGLEYSA 306

[Close]
BLAST of Csa3G278920 vs. TrEMBL
Match: M5WTB8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009213mg PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 6.1e-106
Identity = 215/313 (68.69%), Postives = 240/313 (76.68%), Query Frame = 1 

Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCR+LRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 1   MRMSCNGCRILRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKG PIT I SEAA  G
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGQPITSITSEAAADG 120

Query: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASK--GIASTVVDES 180
            GPPLKAYDIRHVSKDENS ASN+    +  KTR RFKRS VK KASK    + +  D+S
Sbjct: 121 HGPPLKAYDIRHVSKDENSAASNE---PKQAKTRYRFKRSVVKPKASKVGSGSGSGADDS 180

Query: 181 TRP----VCSTELNRSSSGESSLSHQSD-SRHLENESKETESMISVETAEVSPRPAQSVL 240
            +P     C+ E NRS+S ESSLSHQS+ + +++ ESKETESM+S ETAE        +L
Sbjct: 181 AKPSCAGCCADEFNRSTSHESSLSHQSEAAANVDGESKETESMVSSETAEA------ELL 240

Query: 241 FRSESTGGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSE--- 300
           FR E    R+  S P+   ELALELTLG+EP  RA HV+P+KKR+I+A  GL  +S    
Sbjct: 241 FRPEPESARKR-SEPVQEGELALELTLGLEPQSRAHHVVPVKKRRIDA-YGLGGRSSADD 300

Query: 301 -TCNTVLGLDFAA 303
             C   LGLD  A
Sbjct: 301 GACKMELGLDLVA 302

[Close]
BLAST of Csa3G278920 vs. TrEMBL
Match: V4SY62_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013705mg PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.8e-105
Identity = 219/316 (69.30%), Postives = 239/316 (75.63%), Query Frame = 1 

Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGC+ENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 64  MRMSCNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 123

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120
           LRPA+FRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAA  G
Sbjct: 124 LRPAVFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAAIG 183

Query: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIAS-TVVDEST 180
            GPPLKAYDIRHVSKDENS AS D      VKTRCR KR  VK KA+   A   +VDE  
Sbjct: 184 QGPPLKAYDIRHVSKDENSSASVD-----RVKTRCRVKR-VVKPKANCNKAEVNMVDELA 243

Query: 181 RPVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSEST 240
           R  C+ E+NRS+S ESSLSHQS+   +ENESKE++SM+S ETAE +     S+LFR+E  
Sbjct: 244 R--CAEEMNRSTSHESSLSHQSELAVVENESKESDSMVSAETAETA-----SLLFRAEPE 303

Query: 241 GGREGVSVPIPPSE-----------LALELTLGMEPVL--RAQHVIPMKKRKIEAEVGLR 300
            G +       PSE           L LELTLG EPV   RA HV+PMKKRK+EA     
Sbjct: 304 SGAK-------PSERVGWDSCGEIGLGLELTLGFEPVAVSRANHVVPMKKRKLEARSTC- 357

Query: 301 PKSETCNTVLGLDFAA 303
              +TC   LGLDF A
Sbjct: 364 -DGDTCKVELGLDFPA 357

[Close]
BLAST of Csa3G278920 vs. TrEMBL
Match: A0A067F688_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022591mg PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.5e-104
Identity = 218/316 (68.99%), Postives = 238/316 (75.32%), Query Frame = 1 

Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGC+ENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 1   MRMSCNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120
           LRPA+FRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAA  G
Sbjct: 61  LRPAVFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAAIG 120

Query: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIAS-TVVDEST 180
            GPPLKAYDIRHVSKDENS AS D      VKTRCR KR  VK KA+   A   +VDE  
Sbjct: 121 QGPPLKAYDIRHVSKDENSPASVD-----RVKTRCRVKR-VVKPKANCNKAEVNMVDELA 180

Query: 181 RPVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSEST 240
           R  C+ E+NRS+S ESSLSHQS+   +ENESKE++SM+S ETAE +     S+LFR+E  
Sbjct: 181 R--CAEEMNRSTSHESSLSHQSELAVVENESKESDSMVSAETAETA-----SLLFRAEPE 240

Query: 241 GGREGVSVPIPPSE-----------LALELTLGMEPVL--RAQHVIPMKKRKIEAEVGLR 300
            G +       PSE           L LELTLG EPV   RA HV+PMKKRK+E      
Sbjct: 241 SGAK-------PSERVGWDSCGEIGLGLELTLGFEPVAVSRANHVVPMKKRKLEDRSTC- 294

Query: 301 PKSETCNTVLGLDFAA 303
              +TC   LGLDF A
Sbjct: 301 -DVDTCKVELGLDFPA 294

[Close]
BLAST of Csa3G278920 vs. TAIR10
Match: AT3G02550.1 (AT3G02550.1 LOB domain-containing protein 41)

HSP 1 Score: 302.8 bits (774), Expect = 2.5e-82
Identity = 172/300 (57.33%), Postives = 199/300 (66.33%), Query Frame = 1 

Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSE+CSIRPCL WIKSPE+QANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120
           LRP IFRSLL+EACGRIVNPIYGSVGLLWSG+WQLCQ AVEAV+KG P+  I ++AAT G
Sbjct: 61  LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120

Query: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 180
            GPPLK YDIRH+SKD+NS A+  G  +  +    R KR            STV  ++  
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRRAKR-----------VSTVAIQAES 180

Query: 181 PVCSTELNRSSSGESSLSHQSD--SRHLENESKETESMISVETAEVSPRPAQSVLFRSES 240
              S E    +S +SSLSHQS+  + H E ESKE+ES +S E    SP   +        
Sbjct: 181 EGKSDE----ASHDSSLSHQSEIVAAH-EGESKESESNVS-EVLAFSPPAVKG------- 240

Query: 241 TGGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGL 299
                         E+ L+LTL +EPV RA HV+P+KKR+I    G   K  TC T L L
Sbjct: 241 ------------SGEIKLDLTLRLEPVSRAYHVVPVKKRRI-GVFGTCQKESTCKTELML 263

[Close]
BLAST of Csa3G278920 vs. TAIR10
Match: AT1G67100.1 (AT1G67100.1 LOB domain-containing protein 40)

HSP 1 Score: 251.1 bits (640), Expect = 8.5e-67
Identity = 125/180 (69.44%), Postives = 136/180 (75.56%), Query Frame = 1 

Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKS ESQANATVFLAKFYGRAGLMNL+N GPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSG+W LCQAAVEAV++G+P+TPI  +AA TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTG 120

Query: 121 DGPPL--KAYDIRHV-SKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDE 178
             PP   K  DIRHV S+DEN    + G        R     SS+  ++      T  +E
Sbjct: 121 QAPPFNNKLCDIRHVSSRDENVKRRSRGACKEERNVRSLSHESSLSHESPVSSEETTTEE 180


HSP 2 Score: 48.9 bits (115), Expect = 6.4e-06
Identity = 28/63 (44.44%), Postives = 34/63 (53.97%), Query Frame = 1 

Query: 237 ESTGGREGVSVPIPPSELALELTLGMEPVLRAQH-VIPMKKRKIEAEVGLRPKSETCNTV 296
           ES    E  +   P + + LELTLG+EP+ R  H V+PMKKRK+E   G     +TC   
Sbjct: 168 ESPVSSEETTTEEPKTWIGLELTLGLEPLARGNHVVVPMKKRKLE-RCGTSEDEDTCKIE 227

Query: 297 LGL 299
           LGL
Sbjct: 228 LGL 229

[Close]
BLAST of Csa3G278920 vs. TAIR10
Match: AT1G68510.1 (AT1G68510.1 LOB domain-containing protein 42)

HSP 1 Score: 223.8 bits (569), Expect = 1.4e-58
Identity = 111/170 (65.29%), Postives = 130/170 (76.47%), Query Frame = 1 

Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MR+SCNGCRVLRKGC+++C+IRPCLQWIKS +SQANAT+FLAKFYGRAGL+NLI +GPDH
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPI--TPINSEAAT 120
           LRPAIFRSLLYEACGRIVNP+ GSVGL+WSG+W  CQAAV+AVL G PI  TP+ S +A+
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 121 TGDGPPLKAYDIRHVSKDENSVASNDG------GANRPVKTRCRFKRSSV 163
               PP + YDIRHV+KD  +   +         AN+      RFKR SV
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKRESV 170

[Close]
BLAST of Csa3G278920 vs. TAIR10
Match: AT3G49940.1 (AT3G49940.1 LOB domain-containing protein 38)

HSP 1 Score: 180.3 bits (456), Expect = 1.8e-45
Identity = 86/169 (50.89%), Postives = 116/169 (68.64%), Query Frame = 1 

Query: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDHLR 62
           MSCNGCRVLRKGCSENC +RPC+QWI+SPE+Q +ATVF+AKF+GRAGLM+ I+A P+   
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTGDG 122
           PA+F+SLLYEACGR VNP+ G+VGLLW+G+W +CQAAVE VL+G  + PI       G G
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPI--PELLNGGG 120

Query: 123 ----PPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKAS 168
               P   + +   +  +  ++   D   +R +   CRF  S  +++++
Sbjct: 121 FAGFPSPTSDEASEICTEMLNLRKADDSGDRNIYHHCRFSSSRSRSRST 167

[Close]
BLAST of Csa3G278920 vs. TAIR10
Match: AT5G67420.1 (AT5G67420.1 LOB domain-containing protein 37)

HSP 1 Score: 176.8 bits (447), Expect = 2.0e-44
Identity = 90/192 (46.88%), Postives = 124/192 (64.58%), Query Frame = 1 

Query: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDHLR 62
           MSCNGCRVLRKGCSENC +RPC+QWI++ ++Q +ATVF+AKF+GRAGLM+ I+A PD  R
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTGDG 122
           PA+F+SLLYEACGR VNP+ G++G+LW+G+W +CQAAVE VL+G  + PI  E  T G G
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPI-PELLTHGGG 120

Query: 123 ----PPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDES 182
               P   + +   +  +  ++  ND   +R +    RF  S  ++       +     S
Sbjct: 121 FAGFPSPTSEEASEICTEMLNLQQND-STDRNIYHHSRFSSSRSRSTMDSSSPTKRKRLS 180

Query: 183 TRPVCSTELNRS 191
           +    S+EL+ S
Sbjct: 181 SEDQPSSELDLS 190

[Close]
BLAST of Csa3G278920 vs. NCBI nr
Match: gi|449455806|ref|XP_004145641.1| (PREDICTED: LOB domain-containing protein 41 [Cucumis sativus])

HSP 1 Score: 603.2 bits (1554), Expect = 2.5e-169
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 1 

Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 63  MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 122

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG
Sbjct: 123 LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 182

Query: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 180
           DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR
Sbjct: 183 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 242

Query: 181 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTG 240
           PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTG
Sbjct: 243 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTG 302

Query: 241 GREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLDF 300
           GREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLDF
Sbjct: 303 GREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLDF 362

Query: 301 AA 303
           AA
Sbjct: 363 AA 364

[Close]
BLAST of Csa3G278920 vs. NCBI nr
Match: gi|700202618|gb|KGN57751.1| (hypothetical protein Csa_3G278920 [Cucumis sativus])

HSP 1 Score: 603.2 bits (1554), Expect = 2.5e-169
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 1 

Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120

Query: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 180
           DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR
Sbjct: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 180

Query: 181 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTG 240
           PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTG
Sbjct: 181 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTG 240

Query: 241 GREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLDF 300
           GREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLDF
Sbjct: 241 GREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLDF 300

Query: 301 AA 303
           AA
Sbjct: 301 AA 302

[Close]
BLAST of Csa3G278920 vs. NCBI nr
Match: gi|659123293|ref|XP_008461588.1| (PREDICTED: LOB domain-containing protein 41 [Cucumis melo])

HSP 1 Score: 564.3 bits (1453), Expect = 1.3e-157
Identity = 286/303 (94.39%), Postives = 291/303 (96.04%), Query Frame = 1 

Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIK+PESQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 62  MRMSCNGCRVLRKGCSENCSIRPCLQWIKTPESQANATVFLAKFYGRAGLMNLINAGPDH 121

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSE A TG
Sbjct: 122 LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSETAATG 181

Query: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 180
           DGPPLKAYDIRHVSKDENSVASNDGG  RPVKTRCRFKRSS KAKASKGIASTVVDESTR
Sbjct: 182 DGPPLKAYDIRHVSKDENSVASNDGGVIRPVKTRCRFKRSSAKAKASKGIASTVVDESTR 241

Query: 181 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPR-PAQSVLFRSEST 240
           P+CSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSP  P QSVLFRSEST
Sbjct: 242 PLCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPPCPVQSVLFRSEST 301

Query: 241 GGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLD 300
            GRE V+VPIP SELALELTLGMEPVLRAQHVIPMKKRKIE +VGLRPK+ETCNTVLGLD
Sbjct: 302 -GRESVAVPIPRSELALELTLGMEPVLRAQHVIPMKKRKIETDVGLRPKNETCNTVLGLD 361

Query: 301 FAA 303
           FAA
Sbjct: 362 FAA 363

[Close]
BLAST of Csa3G278920 vs. NCBI nr
Match: gi|1009127132|ref|XP_015880531.1| (PREDICTED: LOB domain-containing protein 41 [Ziziphus jujuba])

HSP 1 Score: 394.8 bits (1013), Expect = 1.3e-106
Identity = 212/317 (66.88%), Postives = 240/317 (75.71%), Query Frame = 1 

Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCR+LRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 1   MRMSCNGCRILRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKG PITPINSEAA   
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGTPITPINSEAAANS 120

Query: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSV------KAKASKGIASTV 180
            GPPLKAYDIRHVSKDENS ASND   ++ VKTRCRFKRS+V      K+   + ++ + 
Sbjct: 121 HGPPLKAYDIRHVSKDENSAASND---HQKVKTRCRFKRSAVVKPKPRKSGGFRSVSDSA 180

Query: 181 VDESTRP------VCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRP 240
             E+  P        + ELNRS+S ESS+SHQS++ +++ ESKETESMISVETAE S   
Sbjct: 181 CCEAANPKWASYCTVTDELNRSTSHESSVSHQSEAVNVDGESKETESMISVETAEAS--- 240

Query: 241 AQSVLFRSESTGGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAE---VGL 300
               LFR+E     +    P+   ELALELTL +EPV RA HV+P+KKR+IEA     G 
Sbjct: 241 ----LFRTEPELAPKS-DEPVQEGELALELTLSLEPVSRAHHVVPVKKRRIEASGSVGGS 300

Query: 301 RPKSETCNTVLGLDFAA 303
                 C   LGL++ A
Sbjct: 301 TADDGACKMELGLEYPA 306

[Close]
BLAST of Csa3G278920 vs. NCBI nr
Match: gi|703127270|ref|XP_010103788.1| (hypothetical protein L484_008640 [Morus notabilis])

HSP 1 Score: 393.3 bits (1009), Expect = 3.9e-106
Identity = 213/312 (68.27%), Postives = 242/312 (77.56%), Query Frame = 1 

Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCR+LRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 1   MRMSCNGCRILRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSW LCQAAVEAVLKGAPITPI SEAA + 
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWHLCQAAVEAVLKGAPITPIASEAAAST 120

Query: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSS---VKAKASKGIASTVVDE 180
            GPPLKAYDIRHVSKDENS ASND    + VKTRCRFKR+    VK KA K    +   +
Sbjct: 121 HGPPLKAYDIRHVSKDENSAASND---PQKVKTRCRFKRTGTTVVKPKARKAGCGSTGQD 180

Query: 181 STRP----VCS--TELNRSSSGESSLSHQSDSRH-LENESKETESMISVETAEVSPRPAQ 240
           +  P     C+   ELNRS+S ESS+SHQS++ + ++ ESKETESMISVETAE +   A 
Sbjct: 181 TASPKWAGYCADVAELNRSTSHESSVSHQSEAVNVVDGESKETESMISVETAEPA---AA 240

Query: 241 SVLFRSESTGGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSE 300
           S+LFR+E       V   I  +E+ALELTLG+EP   A+HV+PMKKR+IEA      +  
Sbjct: 241 SLLFRAEPETVTTQVEESIRENEMALELTLGLEPTAHARHVVPMKKRRIEASGCGSGRDG 300

Query: 301 TCNTVLGLDFAA 303
            C   LGL+++A
Sbjct: 301 ACKVELGLEYSA 306

The following BLAST results are available for this feature:
BLAST of Csa3G278920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD41_ARATH4.4e-8157.33LOB domain-containing protein 41 OS=Arabidopsis thaliana GN=LBD41 PE=2 SV=1[more]
LBD40_ARATH1.5e-6569.44LOB domain-containing protein 40 OS=Arabidopsis thaliana GN=LBD40 PE=2 SV=1[more]
LBD42_ARATH2.6e-5765.29LOB domain-containing protein 42 OS=Arabidopsis thaliana GN=LBD42 PE=2 SV=1[more]
LBD38_ARATH3.3e-4450.89LOB domain-containing protein 38 OS=Arabidopsis thaliana GN=LBD38 PE=2 SV=1[more]
LBD37_ARATH3.6e-4346.88LOB domain-containing protein 37 OS=Arabidopsis thaliana GN=LBD37 PE=2 SV=1[more]
BLAST of Csa3G278920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCG6_CUCSA1.7e-169100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G278920 PE=4 SV=1[more]
W9RUX7_9ROSA2.7e-10668.27Uncharacterized protein OS=Morus notabilis GN=L484_008640 PE=4 SV=1[more]
M5WTB8_PRUPE6.1e-10668.69Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009213mg PE=4 SV=1[more]
V4SY62_9ROSI1.8e-10569.30Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013705mg PE=4 SV=1[more]
A0A067F688_CITSI1.5e-10468.99Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022591mg PE=4 SV=1[more]
BLAST of Csa3G278920 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G02550.12.5e-8257.33 LOB domain-containing protein 41[more]
AT1G67100.18.5e-6769.44 LOB domain-containing protein 40[more]
AT1G68510.11.4e-5865.29 LOB domain-containing protein 42[more]
AT3G49940.11.8e-4550.89 LOB domain-containing protein 38[more]
AT5G67420.12.0e-4446.88 LOB domain-containing protein 37[more]
BLAST of Csa3G278920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449455806|ref|XP_004145641.1|2.5e-169100.00PREDICTED: LOB domain-containing protein 41 [Cucumis sativus][more]
gi|700202618|gb|KGN57751.1|2.5e-169100.00hypothetical protein Csa_3G278920 [Cucumis sativus][more]
gi|659123293|ref|XP_008461588.1|1.3e-15794.39PREDICTED: LOB domain-containing protein 41 [Cucumis melo][more]
gi|1009127132|ref|XP_015880531.1|1.3e-10666.88PREDICTED: LOB domain-containing protein 41 [Ziziphus jujuba][more]
gi|703127270|ref|XP_010103788.1|3.9e-10668.27hypothetical protein L484_008640 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
IPR017414LOBD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU105421cucumber EST collection version 3.0transcribed_cluster
CU159186cucumber EST collection version 3.0transcribed_cluster
CU169577cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G278920.1Csa3G278920.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU105421CU105421transcribed_cluster
CU159186CU159186transcribed_cluster
CU169577CU169577transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 4..103
score: 5.8
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 3..109
score: 17
IPR017414LOB domain-containing protein 10/36/41PIRPIRSF038155AS2coord: 1..299
score: 4.3
NoneNo IPR availablePANTHERPTHR31304FAMILY NOT NAMEDcoord: 2..273
score: 1.1E
NoneNo IPR availablePANTHERPTHR31304:SF3LOB DOMAIN-CONTAINING PROTEIN 40coord: 2..273
score: 1.1E