Csa3G271400 (gene) Cucumber (Chinese Long) v2

NameCsa3G271400
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 16461621 .. 16464042 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAATCTCAGTGCTTCTTCTAAAAACTTCACCTCGTTCTTCTCAATTTCTCACCTCACCTTCAACTTCACCTCCTTATCTTGGTATTAACTCTTAATGCATTGAGATAGATGTAACAATAAGCCTTAATGTTGCAATAAATTAAAAAAGGATAGATGTATAGGTTTATCTATGAAGCACAAACACTCTTTTATAAAGAGAGTAACAATGTAAGACACGAACACATGAGGACATGGACTTGACACATTAGAGGGCACGCAAGAAGGGACACACTAGAGGGCACGCAAGAACGAAGACACTTGCACTTTTTAATAGTGCATTTGAAAGCTATCATAAATAGAAAATTGATAAAAGATTTACAATTCATACAAAGATGAATTGTAATAAATTTGGTCTATTATTGTTTTTTTTAATACACAAAGTAAATAGTCTGTTATTTATTTATTTATTTGAGAAAACCTCATTTTTTAGTATCGTTAAAATATAATTTTAAAAAATAAAACACACCCTTTTATTCTTTTAACGTTCATTCCCCATCGTTAAAATCAACCCCTAGCGCTCTTCACCTCTGGTCCTCTCCAATCTTCAAGGCCCCTCCCCTCCGATCAGACGACGCCGGCGACCGCCCCTCACCTCTCCTATCAGACGACGTCCGCGACGTCTGCTCACCATTTCCGATCAGACCAGCTGCGCTCGCCCTCCGTTTTGGTTACTTGCTGTCTGGGTTTAAAGGTTTTTCCCCCCTTTTTTTTCTTGTTTGTGTATCAATGTTTGAGGAATGTTTCAACTGGTCTGCATATATATATATATAAATACATATATATATGCTTTTTTATTCGTTACTTCATATTAATTCGTAGTCCCAATGGAGATGTTGAAATTTATATGAATGGTGCATTTAATTTTTTCTAATGTATTTAATGTGGAATTTGTACATATATGGTGTGGGTTTTTGGAATATTATCTGGATTTTTTGGTATGGTTTAATCAGATTTGAGAGACATGATGTGTTCTTTGGAAATGTGTATCTTAATGTTTTTGTTTTGAAAACATTTTTTAATGAATTCATTCTATTTTTTATACTAGATGCCACCTTCCTTCTCATCTACATCTACCAATAGTAGTGAATCATCCACGTTTTACATTTTGTTTTGGATGAAAGTGTGATCTCTATTTAGGATTTTGTATTTGTGTCGTAGTTTGGAACATTTTAATGAACTCATAAAACTAATGTACTCTTTATTTATGTTTTAAAGAAGTATTGTTATGTTCTAATGTATATGAGTAATTTATCTACAAGTATTATCACATATATTATTTAAAAAAATAAAAAAAATTATAACATCCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTGAGCTCTCTTTACTTCTTTAGAAATTTGGCGTTGTTTCGTGTGTTGGTGTCTGTACTTCCTGGAGGCTTATGGTATGGGGGAGTGTTAGTTTTGTCTTTCGTGTGGTAAAATAGAAATGATGGCTAAGGTATATGGACCAATAAACCGTAGATAAAGATATAGGGCATGTTTGAAATAGTTAAAATCACTTTTGACATTTCAAAATCAATTTTGATGTTATGAAAATTGCATTTAAAAGTGCAAAAGAAAATATTAAATTTATTTTGAGTTATTAAAGACCTGTTTGGAGCGATTTCATCACAAAAATGATCTTAACATCAAATATTACTCCCAAACACGCTCGTAGCTTATGAGTAACAGCATATTTGCAAATGAAACCATGTCTATAACAGAGGTTAGTAACATCAGTTTTGTTAGGAGAAATGAACATATTTCTAAATAACTAATCTCTCAAGAAGCCTAATGTTAGTCTGGGGAGATTGAATGATTATGTTTATGTTACTTTTGAAATTGCACTGAGGTTTGTAACGTAAGTTTATGTTAAATGAACATATTTCTAAATAATTCAATCTCTAAAGGAAACCTTTTTCTGGATACCTATTGGTTATAACTCCCAAAATGATACTTCTACATCAGATGATTAGATGTTTTTATTTATGATAAAAATAGGATACGTCCCAAAGGCCAATGCTAGAGAATTCTCTCCCCAATGATGATTTTGGGATGGCTTGAAAATTTGACTTCCAAAAGTCATCTGAACTCTCCTTACAAGAGGTTACGATCGAGCTTGTTCGACAAGCTACTAAAGTTACGTACACACATATAAAGGACATTCTAATTAGTAAATAGAGGTCGTAAGATAATTTCCATTATTTGTTATCAAAGCAAAAGCAAAATCATTGATAGAGCTTTTTATGGTTAAGTTGGAATCAATATTGTTTTCGTAATAATTTTGGACATTTGGAGCTATAGAAAGGATTCGACCCAAAATGTGACATACGTTTTTCTTTAAGATCCTGCATGCAGATTCTCTAA

mRNA sequence

ATGCCAATCTCAGTGCTTCTTCTAAAAACTTCACCTCGTTCTTCTCAATTTCTCACCTCACCTTCAACTTCACCTCCTTATCTTGCGCTCTTCACCTCTGGTCCTCTCCAATCTTCAAGGCCCCTCCCCTCCGATCAGACGACGCCGGCGACCGCCCCTCACCTCTCCTATCAGACGACGTCCGCGACGTCTGCTCACCATTTCCGATCAGACCAGCTGCGCTCGCCCTCCGTTTTGGTTACTTGCTGTCTGGGTTTAAAGATTCTCTAA

Coding sequence (CDS)

ATGCCAATCTCAGTGCTTCTTCTAAAAACTTCACCTCGTTCTTCTCAATTTCTCACCTCACCTTCAACTTCACCTCCTTATCTTGCGCTCTTCACCTCTGGTCCTCTCCAATCTTCAAGGCCCCTCCCCTCCGATCAGACGACGCCGGCGACCGCCCCTCACCTCTCCTATCAGACGACGTCCGCGACGTCTGCTCACCATTTCCGATCAGACCAGCTGCGCTCGCCCTCCGTTTTGGTTACTTGCTGTCTGGGTTTAAAGATTCTCTAA

Protein sequence

MPISVLLLKTSPRSSQFLTSPSTSPPYLALFTSGPLQSSRPLPSDQTTPATAPHLSYQTTSATSAHHFRSDQLRSPSVLVTCCLGLKIL*
BLAST of Csa3G271400 vs. TrEMBL
Match: A0A0A0LAP6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G271400 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.8e-42
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 1

Query: 1  MPISVLLLKTSPRSSQFLTSPSTSPPYLALFTSGPLQSSRPLPSDQTTPATAPHLSYQTT 60
          MPISVLLLKTSPRSSQFLTSPSTSPPYLALFTSGPLQSSRPLPSDQTTPATAPHLSYQTT
Sbjct: 1  MPISVLLLKTSPRSSQFLTSPSTSPPYLALFTSGPLQSSRPLPSDQTTPATAPHLSYQTT 60

Query: 61 SATSAHHFRSDQLRSPSVLVTCCLGLKIL 90
          SATSAHHFRSDQLRSPSVLVTCCLGLKIL
Sbjct: 61 SATSAHHFRSDQLRSPSVLVTCCLGLKIL 89

BLAST of Csa3G271400 vs. NCBI nr
Match: gi|700202614|gb|KGN57747.1| (hypothetical protein Csa_3G271400 [Cucumis sativus])

HSP 1 Score: 179.5 bits (454), Expect = 2.6e-42
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 1

Query: 1  MPISVLLLKTSPRSSQFLTSPSTSPPYLALFTSGPLQSSRPLPSDQTTPATAPHLSYQTT 60
          MPISVLLLKTSPRSSQFLTSPSTSPPYLALFTSGPLQSSRPLPSDQTTPATAPHLSYQTT
Sbjct: 1  MPISVLLLKTSPRSSQFLTSPSTSPPYLALFTSGPLQSSRPLPSDQTTPATAPHLSYQTT 60

Query: 61 SATSAHHFRSDQLRSPSVLVTCCLGLKIL 90
          SATSAHHFRSDQLRSPSVLVTCCLGLKIL
Sbjct: 61 SATSAHHFRSDQLRSPSVLVTCCLGLKIL 89

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LAP6_CUCSA1.8e-42100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G271400 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700202614|gb|KGN57747.1|2.6e-42100.00hypothetical protein Csa_3G271400 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G271400.1Csa3G271400.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None