Csa3G221770 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G221770
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 14723035 .. 14723564 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATATGATCCCGCCATCGTAACCCGCCATTTTTTCCACCACTTGCACTTTTGGGGCTCTCATCCACCGTCGGCGATCGCCCAGTTTTTTATTTCGTCTTTCACCTTTTGGGCCTCACATCCGCCGGACGATCCACTTCCGTCACCTTCTTCTTCGCCTCACTCTGCATTTCCTCATTGTCTCCGAGTTTGATCACTAGGTACAGCTTTCGCACTTCTTGTTGTCTCCATTTATCCCTCATCCAACTCGCAAGAACTTCAAAATGGCGATGTCATAACTAAAAGCGGCAATATTTTTGGTCATTATATTGTTTAATCAGCATTCGCTATCTTTCATTCTTACTTGCAATTGCATAGGAAAATTTTAAGAAGTTTTGTTGTGTTTTAGGGCATCGATCCTTGGGCATCCGTGTGAAGTATCGAGGAAGAAAACATGCGAGAAGAGTAACGGCCCTGTCACTTACTTATTACATCTCCTTTACGTATTATATTTAGTGTTTAACTCCATTTACGTATGCTGCAGTCTAG

mRNA sequence

ATGGAATATGATCCCGCCATCGTAACCCGCCATTTTTTCCACCACTTGCACTTTTGGGGCTCTCATCCACCGTCGGCGATCGCCCAGTTTTTTATTTCGTCTTTCACCTTTTGGGCCTCACATCCGCCGGACGATCCACTTCCGGCATCGATCCTTGGGCATCCGTGTGAAGTATCGAGGAAGAAAACATGCGAGAAGATCTAG

Coding sequence (CDS)

ATGGAATATGATCCCGCCATCGTAACCCGCCATTTTTTCCACCACTTGCACTTTTGGGGCTCTCATCCACCGTCGGCGATCGCCCAGTTTTTTATTTCGTCTTTCACCTTTTGGGCCTCACATCCGCCGGACGATCCACTTCCGGCATCGATCCTTGGGCATCCGTGTGAAGTATCGAGGAAGAAAACATGCGAGAAGATCTAG

Protein sequence

MEYDPAIVTRHFFHHLHFWGSHPPSAIAQFFISSFTFWASHPPDDPLPASILGHPCEVSRKKTCEKI*
Homology
[Close]
BLAST of Csa3G221770 vs. TrEMBL
Match: A0A0A0L9E6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G221770 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.8e-34
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1 

Query: 1  MEYDPAIVTRHFFHHLHFWGSHPPSAIAQFFISSFTFWASHPPDDPLPASILGHPCEVSR 60
          MEYDPAIVTRHFFHHLHFWGSHPPSAIAQFFISSFTFWASHPPDDPLPASILGHPCEVSR
Sbjct: 1  MEYDPAIVTRHFFHHLHFWGSHPPSAIAQFFISSFTFWASHPPDDPLPASILGHPCEVSR 60

Query: 61 KKTCEKI 68
          KKTCEKI
Sbjct: 61 KKTCEKI 67

[Close]
BLAST of Csa3G221770 vs. NCBI nr
Match: gi|700202461|gb|KGN57594.1| (hypothetical protein Csa_3G221770 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 2.6e-34
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1 

Query: 1  MEYDPAIVTRHFFHHLHFWGSHPPSAIAQFFISSFTFWASHPPDDPLPASILGHPCEVSR 60
          MEYDPAIVTRHFFHHLHFWGSHPPSAIAQFFISSFTFWASHPPDDPLPASILGHPCEVSR
Sbjct: 1  MEYDPAIVTRHFFHHLHFWGSHPPSAIAQFFISSFTFWASHPPDDPLPASILGHPCEVSR 60

Query: 61 KKTCEKI 68
          KKTCEKI
Sbjct: 61 KKTCEKI 67

The following BLAST results are available for this feature:
BLAST of Csa3G221770 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9E6_CUCSA1.8e-34100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G221770 PE=4 SV=1[more]
BLAST of Csa3G221770 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202461|gb|KGN57594.1|2.6e-34100.00hypothetical protein Csa_3G221770 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU151324cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G221770.1Csa3G221770.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU151324CU151324transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G221770MELO3C031925.2Melon (DHL92) v3.6.1cumedB238
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G221770Cucurbita pepo (Zucchini)cpecuB205
Csa3G221770Cucurbita pepo (Zucchini)cpecuB389
Csa3G221770Bottle gourd (USVL1VR-Ls)culsiB211
Csa3G221770Cucumber (Gy14) v2cgybcuB109
Csa3G221770Silver-seed gourdcarcuB0043
Csa3G221770Silver-seed gourdcarcuB0675
Csa3G221770Watermelon (97103) v2cuwmbB215
Csa3G221770Wax gourdcuwgoB283
Csa3G221770Cucumber (Gy14) v1cgycuB003
Csa3G221770Cucurbita maxima (Rimu)cmacuB320
Csa3G221770Cucurbita maxima (Rimu)cmacuB697
Csa3G221770Cucurbita moschata (Rifu)cmocuB307
Csa3G221770Cucurbita moschata (Rifu)cmocuB687
Csa3G221770Melon (DHL92) v3.5.1cumeB166
Csa3G221770Watermelon (Charleston Gray)cuwcgB230
Csa3G221770Watermelon (97103) v1cuwmB243